Clone Sequence Records
BO06922.3prime Sequence
668 bp (667 high quality bases) assembled on 2005-12-03
> BO06922.3prime
ATGGTCTAGAAAGCTTGCCAGCGCCTCGGGGCATTGTTTGTTTTTGCTGA
TGATGAGCCTTTCCGGATCCAGAGAGAGCCGCTTCAACACGTCGTACACT
TTGGATCGGATATCCACCTCGAAGTCCCGATCACGTCCAAGAATCCAGAT
CTGATCGGAGTGACCCAGTGAGCCAATGCTGCCGCAGGACCACAAGATGG
CGAAGTTCTCGTAGTCTGTGTATAGCACCTGGTACTTTCCGGAACCTGGC
AGTAGTCGGGCAATCACGTCCGGAAATCGGGTGGTAAACTTAAAATCCAT
GATGGAGGATCGGCTGTTTTCTGGTGTTGCATAGCCAATGTTCACATTCG
GATTACCAGTTATGCGATTAATGTTTTTAATGGCCACAGCCAGCTTGAAA
TTGGAAAACTTCGATTGTTCGCCCTTGTTGTACGGCTCAAACTGAAAGGT
GGTGCATCCGGAGGCGATTTCCGGAAGGTAAAAAGAGCGCTCTACCTCGT
ACCAGTGTCCAAGGACCCGACTCATGTTAAACTTTGGCATCGATGGATAA
TTCGGGCAACGTCCAAATCCGTAGGCATCTGTCCCAGCAAATGTCACTAA
TAGCACTCCGGACAACAGCCAAACCCTCGAGCCAAGTGGCTGGCCACTCA
TCATGTCGACTGATAACT
BO06922.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4604-PA | 639 | GLaz-RA | 1..636 | 654..19 | 3180 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:49:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-RF | 1101 | CG4604-RF | 204..840 | 655..19 | 3185 | 100 | Minus |
GLaz-RE | 1084 | CG4604-RE | 282..918 | 655..19 | 3185 | 100 | Minus |
GLaz-RD | 1023 | CG4604-RD | 221..857 | 655..19 | 3185 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:49:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13164220..13164491 | 19..290 | 1360 | 100 | Plus |
2R | 25286936 | 2R | 13164677..13164832 | 362..517 | 780 | 100 | Plus |
2R | 25286936 | 2R | 13166422..13166562 | 515..655 | 705 | 100 | Plus |
2R | 25286936 | 2R | 13164546..13164618 | 289..361 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:49:47 has no hits.
BO06922.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:45 Download gff for
BO06922.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-PA | 1..639 | 18..654 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:04 Download gff for
BO06922.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4604-PA | 1..639 | 18..654 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:41:09 Download gff for
BO06922.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 215..869 | 8..661 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:53:33 Download gff for
BO06922.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 215..869 | 8..661 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:53:33 Download gff for
BO06922.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13164208..13164489 | 8..288 | 98 | <- | Plus |
2R | 13164546..13164618 | 289..361 | 100 | <- | Plus |
2R | 13164677..13164831 | 362..516 | 100 | <- | Plus |
2R | 13166424..13166568 | 517..661 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:41:09 Download gff for
BO06922.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9051713..9051994 | 8..288 | 98 | <- | Plus |
arm_2R | 9052051..9052123 | 289..361 | 100 | <- | Plus |
arm_2R | 9052182..9052336 | 362..516 | 100 | <- | Plus |
arm_2R | 9053929..9054073 | 517..661 | 97 | | Plus |
BO06922.5prime Sequence
668 bp (667 high quality bases) assembled on 2005-12-03
> BO06922.5prime
GAAGTTATCAGTCGACATGATGAGTGGCCAGCCACTTGGCTCGAGGGTTT
GGCTGTTGTCCGGAGTGCTATTAGTGACATTTGCTGGGACAGATGCCTAC
GGATTTGGACGTTGCCCGAATTATCCATCGATGCCAAAGTTTAACATGAG
TCGGGTCCTTGGACACTGGTACGAGGTAGAGCGCTCTTTTTACCTTCCGG
AAATCGCCTCCGGATGCACCACCTTTCAGTTTGAGCCGTACAACAAGGGC
GAACAATCGAAGTTTTCCAATTTCAAGCTGGCTGTGGCCATTAAAAACAT
TAATCGCATAACTGGTAATCCGAATGTGAACATTGGCTATGCAACACCAG
AAAACAGCCGATCCTCCATCATGGATTTTAAGTTTACCACCCGATTTCCG
GACGTGATTGCCCGACTACTGCCAGGTTCCGGAAAGTACCAGGTGCTATA
CACAGACTACGAGAACTTCGCCATCTTGTGGTCCTGCGGCAGCATTGGCT
CACTGGGTCACTCCGATCAGATCTGGATTCTTGGACGTGATCGGGACTTC
GAGGTGGATATCCGATCCAAAGTGTACGACGTGTTGAAGCGGCTCTCTCT
GGATCCGGAAAGGCTCATCATCAGCAAAAACAAACAATGCCCCGAGGCGC
TGGCAAGCTTTCTAGACC
BO06922.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4604-PA | 639 | GLaz-RA | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:26:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-RF | 1101 | CG4604-RF | 204..840 | 16..652 | 3185 | 100 | Plus |
GLaz-RE | 1084 | CG4604-RE | 282..918 | 16..652 | 3185 | 100 | Plus |
GLaz-RD | 1023 | CG4604-RD | 221..857 | 16..652 | 3185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:26:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13164220..13164491 | 652..381 | 1360 | 100 | Minus |
2R | 25286936 | 2R | 13164677..13164832 | 309..154 | 780 | 100 | Minus |
2R | 25286936 | 2R | 13166422..13166562 | 156..16 | 705 | 100 | Minus |
2R | 25286936 | 2R | 13164546..13164618 | 382..310 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:26:43 has no hits.
BO06922.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:46 Download gff for
BO06922.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-PA | 1..639 | 17..653 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:06 Download gff for
BO06922.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4604-PA | 1..639 | 17..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:30:39 Download gff for
BO06922.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 215..869 | 10..663 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:03:14 Download gff for
BO06922.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 215..869 | 10..663 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:03:14 Download gff for
BO06922.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13164208..13164489 | 383..663 | 98 | <- | Minus |
2R | 13164546..13164618 | 310..382 | 100 | <- | Minus |
2R | 13164677..13164831 | 155..309 | 100 | <- | Minus |
2R | 13166424..13166568 | 10..154 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:30:39 Download gff for
BO06922.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9051713..9051994 | 383..663 | 98 | <- | Minus |
arm_2R | 9052051..9052123 | 310..382 | 100 | <- | Minus |
arm_2R | 9052182..9052336 | 155..309 | 100 | <- | Minus |
arm_2R | 9053929..9054073 | 10..154 | 97 | | Minus |
BO06922.complete Sequence
670 bp assembled on 2007-10-17
GenBank Submission: FJ630595
> BO06922.complete
GAAGTTATCAGTCGACATGATGAGTGGCCAGCCACTTGGCTCGAGGGTTT
GGCTGTTGTCCGGAGTGCTATTAGTGACATTTGCTGGGACAGATGCCTAC
GGATTTGGACGTTGCCCGAATTATCCATCGATGCCAAAGTTTAACATGAG
TCGGGTCCTTGGACACTGGTACGAGGTAGAGCGCTCTTTTTACCTTCCGG
AAATCGCCTCCGGATGCACCACCTTTCAGTTTGAGCCGTACAACAAGGGC
GAACAATCGAAGTTTTCCAATTTCAAGCTGGCTGTGGCCATTAAAAACAT
TAATCGCATAACTGGTAATCCGAATGTGAACATTGGCTATGCAACACCAG
AAAACAGCCGATCCTCCATCATGGATTTTAAGTTTACCACCCGATTTCCG
GACGTGATTGCCCGACTACTGCCAGGTTCCGGAAAGTACCAGGTGCTATA
CACAGACTACGAGAACTTCGCCATCTTGTGGTCCTGCGGCAGCATTGGCT
CACTGGGTCACTCCGATCAGATCTGGATTCTTGGACGTGATCGGGACTTC
GAGGTGGATATCCGATCCAAAGTGTACGACGTGTTGAAGCGGCTCTCTCT
GGATCCGGAAAGGCTCATCATCAGCAAAAACAAACAATGCCCCGAGGCGC
TGGCAAGCTTTCTAGACCAT
BO06922.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:48:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-RF | 639 | CG4604-PF | 1..636 | 17..652 | 3180 | 100 | Plus |
GLaz-RE | 639 | CG4604-PE | 1..636 | 17..652 | 3180 | 100 | Plus |
GLaz-RD | 639 | CG4604-PD | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:48:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-RF | 1101 | CG4604-RF | 204..840 | 16..652 | 3185 | 100 | Plus |
GLaz-RE | 1084 | CG4604-RE | 282..918 | 16..652 | 3185 | 100 | Plus |
GLaz-RD | 1023 | CG4604-RD | 221..857 | 16..652 | 3185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:48:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13164220..13164491 | 652..381 | 1360 | 100 | Minus |
2R | 25286936 | 2R | 13164677..13164832 | 309..154 | 780 | 100 | Minus |
2R | 25286936 | 2R | 13166422..13166562 | 156..16 | 705 | 100 | Minus |
2R | 25286936 | 2R | 13164546..13164618 | 382..310 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:48:31 has no hits.
BO06922.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:55:09 Download gff for
BO06922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RA | 1..639 | 17..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:05:20 Download gff for
BO06922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RA | 39..693 | 10..663 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:29 Download gff for
BO06922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 222..857 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:43:28 Download gff for
BO06922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RA | 46..681 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:53:15 Download gff for
BO06922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 222..857 | 17..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:53:15 Download gff for
BO06922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13164218..13164489 | 383..654 | 99 | <- | Minus |
2R | 13164546..13164618 | 310..382 | 100 | <- | Minus |
2R | 13164677..13164831 | 155..309 | 100 | <- | Minus |
2R | 13166424..13166561 | 17..154 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:29 Download gff for
BO06922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9051723..9051994 | 383..654 | 99 | <- | Minus |
arm_2R | 9052051..9052123 | 310..382 | 100 | <- | Minus |
arm_2R | 9052182..9052336 | 155..309 | 100 | <- | Minus |
arm_2R | 9053929..9054066 | 17..154 | 100 | | Minus |
BO06922.pep Sequence
Translation from 16 to 670
> BO06922.pep
MMSGQPLGSRVWLLSGVLLVTFAGTDAYGFGRCPNYPSMPKFNMSRVLGH
WYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAVAIKNINRITG
NPNVNIGYATPENSRSSIMDFKFTTRFPDVIARLLPGSGKYQVLYTDYEN
FAILWSCGSIGSLGHSDQIWILGRDRDFEVDIRSKVYDVLKRLSLDPERL
IISKNKQCPEALASFLDH
BO06922.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:44:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-PF | 212 | CG4604-PF | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PE | 212 | CG4604-PE | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PD | 212 | CG4604-PD | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PC | 212 | CG4604-PC | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PB | 212 | CG4604-PB | 1..212 | 1..212 | 1128 | 100 | Plus |