Clone Sequence Records
BO06929.3prime Sequence
860 bp (824 high quality bases) assembled on 2005-12-03
> BO06929.3prime
ATGGTCTAGAAAGCTTGCCTGCGCGATGGTCGATGGCAGATTGAGCAGCG
TGCTCTGTCCGCTGGGCAAGTAGGCGACACCACGGGACCGGGATAGCTGG
TAGGCGATATCCTCGGCGGCCTCAATACGTCGCAGCTCCACCAGACCGTC
TCCGGCCTCGCCGAATGACTTGGCCAACAGGCCAGCGGCTTCGGCATCAC
CCTCCGCCGAAATGATGGACGCCAGCTTCTGTTGCTCGGCCTTCTCCACG
ACAAAACGCGCCTTCTCCGCCTCCTGCTGGGCCACCTGCTTCATCTCGAC
GGCCAGCGTGAACTCCCGACCGAAGGTCAAGTGCGTGAGCGAGATGTCAT
CCAGAATAAAGCCGAACTGCTTGGCACGTACAGTCAGTTCCTGGGAAACG
CGCTGCGACACCATCTCACGCTGGGTGATCAGCTCGCCGGCGTCGAACTG
GGCGACCACAGCCTTCAGCACCTCAGGCGCGATGGAGGGCAGGACACGCT
CGTCGTAGTCCTGGCCGAGAATGGTGTAGATCTTGGGCAGCTGGTCTGGA
ATGGGGCGGTACAGGATTCGGAGCGTGATGTTGACATTCTGCAGATCCTT
GCTGCCCGTTATCACAGGAACGTTGCGGGGCTGGGACCGGATGTCGAAGA
TGATGGGCCGCTGCACCCATGGGATGAAGAAGTGGGTACCCTCGCCGACC
ACGTTCTCCTTGATGCCGGTGAAGCGATCGAAGATGACCGCCCGGTGGCC
GCCTTCCACATTATATAATGCCGAATTGACAACGCCACCCAAAACGGCCA
CTCCGAGGCCCATTTGGCCAATGCGATTAAAGAACTGAGCAGCCATGTCG
ACTGATAACT
BO06929.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10691-PB | 831 | l(2)37Cc-RB | 1..828 | 846..19 | 4140 | 100 | Minus |
| CG10691-PA | 831 | l(2)37Cc-RA | 1..828 | 846..19 | 4140 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:07:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cc-RD | 2022 | CG10691-RD | 118..945 | 846..19 | 4140 | 100 | Minus |
| l(2)37Cc-RA | 1325 | CG10691-RA | 102..929 | 846..19 | 4140 | 100 | Minus |
| l(2)37Cc-RB | 1327 | CG10691-RB | 118..945 | 846..19 | 4140 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:07:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19123121..19123552 | 415..846 | 2160 | 100 | Plus |
| 2L | 23513712 | 2L | 19122422..19122819 | 19..416 | 1990 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:07:27 has no hits.
BO06929.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:58 Download gff for
BO06929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10691-PA | 1..831 | 18..846 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:20 Download gff for
BO06929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10691-PA | 1..831 | 18..846 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:03:25 Download gff for
BO06929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RB | 118..950 | 12..846 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:24:10 Download gff for
BO06929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RB | 118..950 | 12..846 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:24:10 Download gff for
BO06929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19122417..19122817 | 12..414 | 99 | <- | Plus |
| 2L | 19123121..19123552 | 415..846 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:03:25 Download gff for
BO06929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19122417..19122817 | 12..414 | 99 | <- | Plus |
| arm_2L | 19123121..19123552 | 415..846 | 100 | | Plus |
BO06929.5prime Sequence
860 bp (840 high quality bases) assembled on 2005-12-03
> BO06929.5prime
GAAGTTATCAGTCGACATGGCTGCTCAGTTCTTTAATCGCATTGGCCAAA
TGGGCCTCGGAGTGGCCGTTTTGGGTGGCGTTGTCAATTCGGCATTATAT
AATGTGGAAGGCGGCCACCGGGCGGTCATCTTCGATCGCTTCACCGGCAT
CAAGGAGAACGTGGTCGGCGAGGGTACCCACTTCTTCATCCCATGGGTGC
AGCGGCCCATCATCTTCGACATCCGGTCCCAGCCCCGCAACGTTCCTGTG
ATAACGGGCAGCAAGGATCTGCAGAATGTCAACATCACGCTCCGAATCCT
GTACCGCCCCATTCCAGACCAGCTGCCCAAGATCTACACCATTCTCGGCC
AGGACTACGACGAGCGTGTCCTGCCCTCCATCGCGCCTGAGGTGCTGAAG
GCTGTGGTCGCCCAGTTCGACGCCGGCGAGCTGATCACCCAGCGTGAGAT
GGTGTCGCAGCGCGTTTCCCAGGAACTGACTGTACGTGCCAAGCAGTTCG
GCTTTATTCTGGATGACATCTCGCTCACGCACTTGACCTTCGGTCGGGAG
TTCACGCTGGCCGTCGAGATGAAGCAGGTGGCCCAGCAGGAGGCGGAGAA
GGCGCGTTTTGTCGTGGAGAAGGCCGAGCAACAGAAGCTGGCGTCCATCA
TTTCGGCGGAGGGTGATGCCGAAGCCGCTGGCCTGTTGGCCAAGTCATTC
GGCGAGGCCGGAGACGGTCTGGTGGAGCTGCGACGTATTGAGGCCGCCGA
GGATATCGCCTACCAGCTATCCCGGTCCCGTGGTGTCGCCTACTTGCCCA
GCGGACAGAGCACGCTGCTCAATCTGCCATCGACCATCGCGCAGGCAAGC
TTTCTAGACC
BO06929.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10691-PB | 831 | l(2)37Cc-RB | 1..828 | 17..844 | 4140 | 100 | Plus |
| CG10691-PA | 831 | l(2)37Cc-RA | 1..828 | 17..844 | 4140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:08:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cc-RD | 2022 | CG10691-RD | 118..945 | 17..844 | 4140 | 100 | Plus |
| l(2)37Cc-RA | 1325 | CG10691-RA | 102..929 | 17..844 | 4140 | 100 | Plus |
| l(2)37Cc-RB | 1327 | CG10691-RB | 118..945 | 17..844 | 4140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:08:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19123121..19123552 | 448..17 | 2160 | 100 | Minus |
| 2L | 23513712 | 2L | 19122422..19122819 | 844..447 | 1990 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 05:08:24 has no hits.
BO06929.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:59 Download gff for
BO06929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10691-PA | 1..831 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:22 Download gff for
BO06929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10691-PA | 1..831 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:20:33 Download gff for
BO06929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RB | 118..950 | 17..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:31:51 Download gff for
BO06929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RB | 118..950 | 17..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:31:51 Download gff for
BO06929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19122417..19122817 | 449..851 | 99 | <- | Minus |
| 2L | 19123121..19123552 | 17..448 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:20:33 Download gff for
BO06929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19122417..19122817 | 449..851 | 99 | <- | Minus |
| arm_2L | 19123121..19123552 | 17..448 | 100 | | Minus |
BO06929.complete Sequence
862 bp (862 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ630596
> BO06929.complete
GAAGTTATCAGTCGACATGGCTGCTCAGTTCTTTAATCGCATTGGCCAAA
TGGGCCTCGGAGTGGCCGTTTTGGGTGGCGTTGTCAATTCGGCATTATAT
AATGTGGAAGGCGGCCACCGGGCGGTCATCTTCGATCGCTTCACCGGCAT
CAAGGAGAACGTGGTCGGCGAGGGTACCCACTTCTTCATCCCATGGGTGC
AGCGGCCCATCATCTTCGACATCCGGTCCCAGCCCCGCAACGTTCCTGTG
ATAACGGGCAGCAAGGATCTGCAGAATGTCAACATCACGCTCCGAATCCT
GTACCGCCCCATTCCAGACCAGCTGCCCAAGATCTACACCATTCTCGGCC
AGGACTACGACGAGCGTGTCCTGCCCTCCATCGCGCCTGAGGTGCTGAAG
GCTGTGGTCGCCCAGTTCGACGCCGGCGAGCTGATCACCCAGCGTGAGAT
GGTGTCGCAGCGCGTTTCCCAGGAACTGACTGTACGTGCCAAGCAGTTCG
GCTTTATTCTGGATGACATCTCGCTCACGCACTTGACCTTCGGTCGGGAG
TTCACGCTGGCCGTCGAGATGAAGCAGGTGGCCCAGCAGGAGGCGGAGAA
GGCGCGTTTTGTCGTGGAGAAGGCCGAGCAACAGAAGCTGGCGTCCATCA
TTTCGGCGGAGGGTGATGCCGAAGCCGCTGGCCTGTTGGCCAAGTCATTC
GGCGAGGCCGGAGACGGTCTGGTGGAGCTGCGACGTATTGAGGCCGCCGA
GGATATCGCCTACCAGCTATCCCGGTCCCGTGGTGTCGCCTACTTGCCCA
GCGGACAGAGCACGCTGCTCAATCTGCCATCGACCATCGCGCAGGCAAGC
TTTCTAGACCAT
BO06929.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:04:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cc-RD | 831 | CG10691-PD | 1..828 | 17..844 | 4140 | 100 | Plus |
| l(2)37Cc-RA | 831 | CG10691-PA | 1..828 | 17..844 | 4140 | 100 | Plus |
| l(2)37Cc-RB | 831 | CG10691-PB | 1..828 | 17..844 | 4140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:04:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cc-RD | 2022 | CG10691-RD | 118..945 | 17..844 | 4140 | 100 | Plus |
| l(2)37Cc-RA | 1325 | CG10691-RA | 102..929 | 17..844 | 4140 | 100 | Plus |
| l(2)37Cc-RB | 1327 | CG10691-RB | 118..945 | 17..844 | 4140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19123121..19123552 | 448..17 | 2160 | 100 | Minus |
| 2L | 23513712 | 2L | 19122422..19122819 | 844..447 | 1990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:04:54 has no hits.
BO06929.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:20:01 Download gff for
BO06929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RA | 1..831 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:56 Download gff for
BO06929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RA | 102..934 | 17..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:38:29 Download gff for
BO06929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RB | 118..945 | 17..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:44:06 Download gff for
BO06929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RB | 118..945 | 17..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:44:06 Download gff for
BO06929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19122418..19122817 | 449..846 | 99 | <- | Minus |
| 2L | 19123121..19123552 | 17..448 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:38:29 Download gff for
BO06929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19122418..19122817 | 449..846 | 99 | <- | Minus |
| arm_2L | 19123121..19123552 | 17..448 | 100 | | Minus |
BO06929.pep Sequence
Translation from 16 to 862
> BO06929.pep
MAAQFFNRIGQMGLGVAVLGGVVNSALYNVEGGHRAVIFDRFTGIKENVV
GEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSKDLQNVNITLRILYRPIP
DQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQRV
SQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVV
EKAEQQKLASIISAEGDAEAAGLLAKSFGEAGDGLVELRRIEAAEDIAYQ
LSRSRGVAYLPSGQSTLLNLPSTIAQASFLDH
BO06929.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cc-PD | 276 | CG10691-PD | 1..276 | 1..276 | 1370 | 100 | Plus |
| l(2)37Cc-PA | 276 | CG10691-PA | 1..276 | 1..276 | 1370 | 100 | Plus |
| l(2)37Cc-PB | 276 | CG10691-PB | 1..276 | 1..276 | 1370 | 100 | Plus |
| Phb2-PF | 299 | CG15081-PF | 21..283 | 12..270 | 644 | 50.6 | Plus |
| Phb2-PA | 299 | CG15081-PA | 21..283 | 12..270 | 644 | 50.6 | Plus |
