Clone Sequence Records
BO06932.3prime Sequence
791 bp (755 high quality bases) assembled on 2005-12-03
> BO06932.3prime
ATGGTCTAGAAAGCTTGCGATGTGGCCGCCCTCCTTTAGCTTGGCCACCA
GGGCATCCACGTCGGCGACGGTGGCGCCGGCCTGGCGCACAGGAGGATCC
TCCACGGAGATGACCTCGATGCGGGGCGAGGTGTCCACGCCGAGATCCTT
GGCCGTAACCTTCTTCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCA
ACGTGGCGTAGCGAGGGGTGTTCAGCCGGAGATCGGCGCTCAGCACAGCC
GGGGTCTTGGTCTTGATTGTCTCCAGGCCACCATCAATTTCACGCGTGAT
GGTCAGACCGGCGTCTGTCTTCTCGATCTTGTTGCAGAAGGTGCCCTGCG
GCCAGTCGAGCACGGCGGCGGTCATCTGGGCCGTTTGGTTGGCATCATCG
TCGATGGCCTGCTTGCCAAGGATGACCAGGTCGGCTTTTTCGTCAAGAGC
CAACTTGGCCAGAATCTTCGACACGTGGATGGGCTGCAGAAGCTCGTACT
CGGCGGCCGGGATCTCTACGTGGACGCCGCGATCGGCGCCCATGGCCAGG
GCGGTGCGGATCACCTCCTGCGACTGGGCCGGGCCCACGGAGACGGCGAT
CACCTCCTCGGCCAGCTTTTTCTCCTTCAGCTTCACCGCCTCCTCCACGG
CGATCTCGTCGAAGGGATTCATCGAGTGCTTCACGCCCTGGGTGACCACG
CCAGTCTTGTCGGGCTTGACGCGCACCTTGACGGCGTAGTCGATCACACG
CTTAACTCCCACCAAAACACGCGCCATGTCGACTGATAACT
BO06932.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7834-PA | 762 | CG7834-RA | 1..759 | 777..19 | 3770 | 99.8 | Minus |
CG7834-PB | 762 | CG7834-RB | 1..759 | 777..19 | 3770 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:48:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7834-RB | 1116 | CG7834-RB | 5..763 | 777..19 | 3780 | 99.9 | Minus |
CG7834-RA | 1021 | CG7834-RA | 44..802 | 777..19 | 3780 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:48:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29801952..29802665 | 19..732 | 3555 | 99.9 | Plus |
3R | 32079331 | 3R | 29802787..29802840 | 724..777 | 255 | 98.1 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:48:55 has no hits.
BO06932.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:04 Download gff for
BO06932.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-PB | 1..762 | 18..777 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:30 Download gff for
BO06932.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-PB | 1..762 | 18..777 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:21:26 Download gff for
BO06932.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-RA | 37..802 | 19..784 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:39:43 Download gff for
BO06932.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-RA | 37..802 | 19..784 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:39:43 Download gff for
BO06932.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29801952..29802659 | 19..726 | 100 | <- | Plus |
3R | 29802790..29802835 | 727..772 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:21:26 Download gff for
BO06932.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25627674..25628381 | 19..726 | 100 | <- | Plus |
arm_3R | 25628512..25628557 | 727..772 | 97 | -> | Plus |
BO06932.5prime Sequence
791 bp (790 high quality bases) assembled on 2005-12-03
> BO06932.5prime
GAAGTTATCAGTCGACATGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGA
TCGACTACGCCGTCAAGGTGCGCGTCAAGCCCGACAAGACTGGCGTGGTC
ACCCAGGGCGTGAAGCACTCGATGAATCCCTTCGACGAGATCGCCGTGGA
GGAGGCGGTGAAGCTGAAGGAGAAAAAGCTGGCCGAGGAGGTGATCGCCG
TCTCCGTGGGCCCGGCCCAGTCGCAGGAGGTGATCCGCACCGCCCTGGCC
ATGGGCGCCGATCGCGGCGTCCACGTAGAGATCCCGGCCGCCGAGTACGA
GCTTCTGCAGCCCATCCACGTGTCGAAGATTCTGGCCAAGTTGGCTCTTG
ACGAAAAAGCCGACCTGGTCATCCTTGGCAAGCAGGCCATCGACGATGAT
GCCAACCAAACGGCCCAGATGACCGCCGCCGTGCTCGACTGGCCGCAGGG
CACCTTCTGCAACAAGATCGAGAAGACAGACGCCGGTCTGACCATCACGC
GTGAAATTGATGGTGGCCTGGAGACAATCAAGACCAAGACCCCGGCTGTG
CTGAGCGCCGATCTCCGGCTGAACACCCCTCGCTACGCCACGTTGCCGAA
CATCATGAAGGCCAAGAAGAAGCCGCTGAAGAAGGTTACGGCCAAGGATC
TCGGCGTGGACACCTCGCCCCGCATCGAGGTCATCTCCGTGGAGGATCCT
CCTGTGCGCCAGGCCGGCGCCACCGTCGCCGACGTGGATGCCCTGGTGGC
CAAGCTAAAGGAGGGCGGCCACATCGCAAGCTTTCTAGACC
BO06932.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7834-PA | 762 | CG7834-RA | 1..759 | 17..775 | 3795 | 100 | Plus |
CG7834-PB | 762 | CG7834-RB | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:27:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7834-RB | 1116 | CG7834-RB | 5..763 | 17..775 | 3795 | 100 | Plus |
CG7834-RA | 1021 | CG7834-RA | 44..802 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:27:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29801952..29802665 | 775..62 | 3555 | 99.9 | Minus |
3R | 32079331 | 3R | 29802787..29802840 | 70..17 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:27:52 has no hits.
BO06932.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:05 Download gff for
BO06932.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-PB | 1..762 | 17..776 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:31 Download gff for
BO06932.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-PB | 1..762 | 17..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:30:44 Download gff for
BO06932.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-RA | 37..802 | 10..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:06:59 Download gff for
BO06932.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-RA | 37..802 | 10..775 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:06:59 Download gff for
BO06932.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29801952..29802659 | 68..775 | 100 | <- | Minus |
3R | 29802790..29802835 | 22..67 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:30:44 Download gff for
BO06932.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25627674..25628381 | 68..775 | 100 | <- | Minus |
arm_3R | 25628512..25628557 | 22..67 | 100 | -> | Minus |
BO06932.complete Sequence
793 bp (793 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ630597
> BO06932.complete
GAAGTTATCAGTCGACATGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGA
TCGACTACGCCGTCAAGGTGCGCGTCAAGCCCGACAAGACTGGCGTGGTC
ACCCAGGGCGTGAAGCACTCGATGAATCCCTTCGACGAGATCGCCGTGGA
GGAGGCGGTGAAGCTGAAGGAGAAAAAGCTGGCCGAGGAGGTGATCGCCG
TCTCCGTGGGCCCGGCCCAGTCGCAGGAGGTGATCCGCACCGCCCTGGCC
ATGGGCGCCGATCGCGGCGTCCACGTAGAGATCCCGGCCGCCGAGTACGA
GCTTCTGCAGCCCATCCACGTGTCGAAGATTCTGGCCAAGTTGGCTCTTG
ACGAAAAAGCCGACCTGGTCATCCTTGGCAAGCAGGCCATCGACGATGAT
GCCAACCAAACGGCCCAGATGACCGCCGCCGTGCTCGACTGGCCGCAGGG
CACCTTCTGCAACAAGATCGAGAAGACAGACGCCGGTCTGACCATCACGC
GTGAAATTGATGGTGGCCTGGAGACAATCAAGACCAAGACCCCGGCTGTG
CTGAGCGCCGATCTCCGGCTGAACACCCCTCGCTACGCCACGTTGCCGAA
CATCATGAAGGCCAAGAAGAAGCCGCTGAAGAAGGTTACGGCCAAGGATC
TCGGCGTGGACACCTCGCCCCGCATCGAGGTCATCTCCGTGGAGGATCCT
CCTGTGCGCCAGGCCGGCGCCACCGTCGCCGACGTGGATGCCCTGGTGGC
CAAGCTAAAGGAGGGCGGCCACATCGCAAGCTTTCTAGACCAT
BO06932.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:58:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7834-RB | 762 | CG7834-PB | 1..759 | 17..775 | 3795 | 100 | Plus |
CG7834-RA | 762 | CG7834-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:58:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7834-RB | 1116 | CG7834-RB | 5..763 | 17..775 | 3795 | 100 | Plus |
CG7834-RA | 1021 | CG7834-RA | 44..802 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:58:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29801952..29802665 | 775..62 | 3555 | 99.9 | Minus |
3R | 32079331 | 3R | 29802787..29802840 | 70..17 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:58:38 has no hits.
BO06932.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:20:02 Download gff for
BO06932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-RB | 1..762 | 17..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:58 Download gff for
BO06932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-RB | 1..763 | 14..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:30:12 Download gff for
BO06932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-RA | 44..802 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:20:02 Download gff for
BO06932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-RB | 1..763 | 14..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:00:34 Download gff for
BO06932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7834-RA | 44..802 | 17..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:00:34 Download gff for
BO06932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29801950..29802659 | 68..777 | 99 | <- | Minus |
3R | 29802790..29802840 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:30:12 Download gff for
BO06932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25627672..25628381 | 68..777 | 99 | <- | Minus |
arm_3R | 25628512..25628562 | 17..67 | 100 | | Minus |
BO06932.pep Sequence
Translation from 16 to 793
> BO06932.pep
MARVLVGVKRVIDYAVKVRVKPDKTGVVTQGVKHSMNPFDEIAVEEAVKL
KEKKLAEEVIAVSVGPAQSQEVIRTALAMGADRGVHVEIPAAEYELLQPI
HVSKILAKLALDEKADLVILGKQAIDDDANQTAQMTAAVLDWPQGTFCNK
IEKTDAGLTITREIDGGLETIKTKTPAVLSADLRLNTPRYATLPNIMKAK
KKPLKKVTAKDLGVDTSPRIEVISVEDPPVRQAGATVADVDALVAKLKEG
GHIASFLDH
BO06932.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7834-PB | 253 | CG7834-PB | 1..253 | 1..253 | 1252 | 100 | Plus |
CG7834-PA | 253 | CG7834-PA | 1..253 | 1..253 | 1252 | 100 | Plus |