Clone BO06932 Report

Search the DGRC for BO06932

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:69
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG7834-RA
Protein status:BO06932.pep: validated full length
Sequenced Size:793

Clone Sequence Records

BO06932.3prime Sequence

791 bp (755 high quality bases) assembled on 2005-12-03

> BO06932.3prime
ATGGTCTAGAAAGCTTGCGATGTGGCCGCCCTCCTTTAGCTTGGCCACCA
GGGCATCCACGTCGGCGACGGTGGCGCCGGCCTGGCGCACAGGAGGATCC
TCCACGGAGATGACCTCGATGCGGGGCGAGGTGTCCACGCCGAGATCCTT
GGCCGTAACCTTCTTCAGCGGCTTCTTCTTGGCCTTCATGATGTTCGGCA
ACGTGGCGTAGCGAGGGGTGTTCAGCCGGAGATCGGCGCTCAGCACAGCC
GGGGTCTTGGTCTTGATTGTCTCCAGGCCACCATCAATTTCACGCGTGAT
GGTCAGACCGGCGTCTGTCTTCTCGATCTTGTTGCAGAAGGTGCCCTGCG
GCCAGTCGAGCACGGCGGCGGTCATCTGGGCCGTTTGGTTGGCATCATCG
TCGATGGCCTGCTTGCCAAGGATGACCAGGTCGGCTTTTTCGTCAAGAGC
CAACTTGGCCAGAATCTTCGACACGTGGATGGGCTGCAGAAGCTCGTACT
CGGCGGCCGGGATCTCTACGTGGACGCCGCGATCGGCGCCCATGGCCAGG
GCGGTGCGGATCACCTCCTGCGACTGGGCCGGGCCCACGGAGACGGCGAT
CACCTCCTCGGCCAGCTTTTTCTCCTTCAGCTTCACCGCCTCCTCCACGG
CGATCTCGTCGAAGGGATTCATCGAGTGCTTCACGCCCTGGGTGACCACG
CCAGTCTTGTCGGGCTTGACGCGCACCTTGACGGCGTAGTCGATCACACG
CTTAACTCCCACCAAAACACGCGCCATGTCGACTGATAACT

BO06932.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-PA 762 CG7834-RA 1..759 777..19 3770 99.8 Minus
CG7834-PB 762 CG7834-RB 1..759 777..19 3770 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:48:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-RB 1116 CG7834-RB 5..763 777..19 3780 99.9 Minus
CG7834-RA 1021 CG7834-RA 44..802 777..19 3780 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29801952..29802665 19..732 3555 99.9 Plus
3R 32079331 3R 29802787..29802840 724..777 255 98.1 Plus
Blast to na_te.dros performed on 2015-02-12 23:48:55 has no hits.

BO06932.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:04 Download gff for BO06932.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7834-PB 1..762 18..777 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:30 Download gff for BO06932.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7834-PB 1..762 18..777 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:21:26 Download gff for BO06932.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 37..802 19..784 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:39:43 Download gff for BO06932.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 37..802 19..784 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:39:43 Download gff for BO06932.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29801952..29802659 19..726 100 <- Plus
3R 29802790..29802835 727..772 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:21:26 Download gff for BO06932.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25627674..25628381 19..726 100 <- Plus
arm_3R 25628512..25628557 727..772 97 -> Plus

BO06932.5prime Sequence

791 bp (790 high quality bases) assembled on 2005-12-03

> BO06932.5prime
GAAGTTATCAGTCGACATGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGA
TCGACTACGCCGTCAAGGTGCGCGTCAAGCCCGACAAGACTGGCGTGGTC
ACCCAGGGCGTGAAGCACTCGATGAATCCCTTCGACGAGATCGCCGTGGA
GGAGGCGGTGAAGCTGAAGGAGAAAAAGCTGGCCGAGGAGGTGATCGCCG
TCTCCGTGGGCCCGGCCCAGTCGCAGGAGGTGATCCGCACCGCCCTGGCC
ATGGGCGCCGATCGCGGCGTCCACGTAGAGATCCCGGCCGCCGAGTACGA
GCTTCTGCAGCCCATCCACGTGTCGAAGATTCTGGCCAAGTTGGCTCTTG
ACGAAAAAGCCGACCTGGTCATCCTTGGCAAGCAGGCCATCGACGATGAT
GCCAACCAAACGGCCCAGATGACCGCCGCCGTGCTCGACTGGCCGCAGGG
CACCTTCTGCAACAAGATCGAGAAGACAGACGCCGGTCTGACCATCACGC
GTGAAATTGATGGTGGCCTGGAGACAATCAAGACCAAGACCCCGGCTGTG
CTGAGCGCCGATCTCCGGCTGAACACCCCTCGCTACGCCACGTTGCCGAA
CATCATGAAGGCCAAGAAGAAGCCGCTGAAGAAGGTTACGGCCAAGGATC
TCGGCGTGGACACCTCGCCCCGCATCGAGGTCATCTCCGTGGAGGATCCT
CCTGTGCGCCAGGCCGGCGCCACCGTCGCCGACGTGGATGCCCTGGTGGC
CAAGCTAAAGGAGGGCGGCCACATCGCAAGCTTTCTAGACC

BO06932.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-PA 762 CG7834-RA 1..759 17..775 3795 100 Plus
CG7834-PB 762 CG7834-RB 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:27:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-RB 1116 CG7834-RB 5..763 17..775 3795 100 Plus
CG7834-RA 1021 CG7834-RA 44..802 17..775 3795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:27:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29801952..29802665 775..62 3555 99.9 Minus
3R 32079331 3R 29802787..29802840 70..17 270 100 Minus
Blast to na_te.dros performed on 2015-02-13 01:27:52 has no hits.

BO06932.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:05 Download gff for BO06932.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7834-PB 1..762 17..776 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:31 Download gff for BO06932.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7834-PB 1..762 17..776 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:30:44 Download gff for BO06932.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 37..802 10..775 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:06:59 Download gff for BO06932.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 37..802 10..775 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:06:59 Download gff for BO06932.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29801952..29802659 68..775 100 <- Minus
3R 29802790..29802835 22..67 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:30:44 Download gff for BO06932.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25627674..25628381 68..775 100 <- Minus
arm_3R 25628512..25628557 22..67 100 -> Minus

BO06932.complete Sequence

793 bp (793 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ630597

> BO06932.complete
GAAGTTATCAGTCGACATGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGA
TCGACTACGCCGTCAAGGTGCGCGTCAAGCCCGACAAGACTGGCGTGGTC
ACCCAGGGCGTGAAGCACTCGATGAATCCCTTCGACGAGATCGCCGTGGA
GGAGGCGGTGAAGCTGAAGGAGAAAAAGCTGGCCGAGGAGGTGATCGCCG
TCTCCGTGGGCCCGGCCCAGTCGCAGGAGGTGATCCGCACCGCCCTGGCC
ATGGGCGCCGATCGCGGCGTCCACGTAGAGATCCCGGCCGCCGAGTACGA
GCTTCTGCAGCCCATCCACGTGTCGAAGATTCTGGCCAAGTTGGCTCTTG
ACGAAAAAGCCGACCTGGTCATCCTTGGCAAGCAGGCCATCGACGATGAT
GCCAACCAAACGGCCCAGATGACCGCCGCCGTGCTCGACTGGCCGCAGGG
CACCTTCTGCAACAAGATCGAGAAGACAGACGCCGGTCTGACCATCACGC
GTGAAATTGATGGTGGCCTGGAGACAATCAAGACCAAGACCCCGGCTGTG
CTGAGCGCCGATCTCCGGCTGAACACCCCTCGCTACGCCACGTTGCCGAA
CATCATGAAGGCCAAGAAGAAGCCGCTGAAGAAGGTTACGGCCAAGGATC
TCGGCGTGGACACCTCGCCCCGCATCGAGGTCATCTCCGTGGAGGATCCT
CCTGTGCGCCAGGCCGGCGCCACCGTCGCCGACGTGGATGCCCTGGTGGC
CAAGCTAAAGGAGGGCGGCCACATCGCAAGCTTTCTAGACCAT

BO06932.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-RB 762 CG7834-PB 1..759 17..775 3795 100 Plus
CG7834-RA 762 CG7834-PA 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-RB 1116 CG7834-RB 5..763 17..775 3795 100 Plus
CG7834-RA 1021 CG7834-RA 44..802 17..775 3795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29801952..29802665 775..62 3555 99.9 Minus
3R 32079331 3R 29802787..29802840 70..17 270 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:58:38 has no hits.

BO06932.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:20:02 Download gff for BO06932.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RB 1..762 17..776 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:58 Download gff for BO06932.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RB 1..763 14..775 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:30:12 Download gff for BO06932.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 44..802 17..777 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:20:02 Download gff for BO06932.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RB 1..763 14..775 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:00:34 Download gff for BO06932.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 44..802 17..777 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:00:34 Download gff for BO06932.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29801950..29802659 68..777 99 <- Minus
3R 29802790..29802840 17..67 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:30:12 Download gff for BO06932.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25627672..25628381 68..777 99 <- Minus
arm_3R 25628512..25628562 17..67 100   Minus

BO06932.pep Sequence

Translation from 16 to 793

> BO06932.pep
MARVLVGVKRVIDYAVKVRVKPDKTGVVTQGVKHSMNPFDEIAVEEAVKL
KEKKLAEEVIAVSVGPAQSQEVIRTALAMGADRGVHVEIPAAEYELLQPI
HVSKILAKLALDEKADLVILGKQAIDDDANQTAQMTAAVLDWPQGTFCNK
IEKTDAGLTITREIDGGLETIKTKTPAVLSADLRLNTPRYATLPNIMKAK
KKPLKKVTAKDLGVDTSPRIEVISVEDPPVRQAGATVADVDALVAKLKEG
GHIASFLDH

BO06932.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-PB 253 CG7834-PB 1..253 1..253 1252 100 Plus
CG7834-PA 253 CG7834-PA 1..253 1..253 1252 100 Plus