Clone Sequence Records
BO06935.3prime Sequence
928 bp (801 high quality bases) assembled on 2005-12-03
> BO06935.3prime
ATGGTCTAGAAAGCTTGCGCCACTCCTTGCGGACGTCATCTGCTCCAGCA
TGCGGTAGTAGCAGTACCGGCTATCGTAGTCCAGATCGTACCAGAAGTTC
ACGGCGATGCACTTGTGGCTTTGGGACACATGGTGGAACCAGTAGTTGGG
CAGGTATAGGATGTCTCCCGCGTGAACACGTACTTTCAGAGGCTTGGCCC
GGGCGTACTCCGGATATTTGGCCAGGTCGGGTGACAAGGGATCAACGCTG
ACCCATTCTGTGAACTGATCGCTGCCTTCCTCATCCCTCAACGGTTCAAT
GTAGAACTGACCACTATCTGAGGTCTTGTAAACGCCTGTAGGGTAAATTC
CTCGCGGTACGCAGCTAAGCTGGTGCGGCGGGATGAGAACGAAGTCCTTG
TGACCGGATATCACGCAGTACACGTTCTCGTATGGATCCTTGTGCATGGA
GGTAACGGCGCGCTCGTCGCCCAGCCAAAAGTTAACAGCATCAGGCGGTT
TGTTAAAGGACTGCTGCGCAAAGTCGAGATCACTGACCCGCAGATCAGCA
GCCAGTTCCGGTAGGTCCACACTGAGGTTAGAGTTCTGCTTTTGTATGTA
GTGGACAGCACCAGTGGGATCATCCAGGCGGCGGACCACCTCGGACAGCT
TCATTTTCGTCTCCAGCGGCAAAACGAAGTACTCCTGTCCATTTTGAGTG
GCCAAGCCGTCGGCATAGCCATTCGGGGTGATTGCCACATCCACGCTCCT
GTCCCCGAGAGCCTCGATCAGGTACTTTGGCGTCCATTTGCCAATCGCGG
GCCAATTGAGTGCCTTGCGAATGACCACCGGCTGGTTTTTGGAGTAGAAT
TCCCGAACAAACTCCAAGGCGGTTGGGATCCTGTCCAGCTCCACTACGCT
GCTCCCGATGCACAGCTCCTCCGCTTCC
BO06935.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10133-PA | 951 | CG10133-RA | 39..948 | 928..19 | 4475 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:23:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10133-RA | 1097 | CG10133-RA | 63..972 | 928..19 | 4505 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:22:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13449312..13450221 | 19..928 | 4505 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:22:58 has no hits.
BO06935.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:11 Download gff for
BO06935.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-PA | 39..951 | 15..928 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:38 Download gff for
BO06935.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-PA | 39..951 | 15..928 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:07:15 Download gff for
BO06935.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 63..975 | 15..928 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:19:01 Download gff for
BO06935.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 63..975 | 15..928 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:19:01 Download gff for
BO06935.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13449309..13450221 | 15..928 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:07:15 Download gff for
BO06935.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13442409..13443321 | 15..928 | 99 | | Plus |
BO06935.5prime Sequence
922 bp (804 high quality bases) assembled on 2005-12-03
> BO06935.5prime
GAAGTTATCAGTCGACATGTCCGAGGTCGAAAGAGCTCTGGATGTTCTGC
TCCAGGAAGCGGAGGAGCTGTGCATCGGGAGCAGCGTAGTGGAGCTGGAC
AGGATTCCAACCGCCTTGGAGTTTTGTCGGGAATTCTACTCCAAAAACCA
GCCGGTGGTCATTCGCAAGGCACTCAATTGGCCCGCGATTGGCAAATGGA
CGCCAAAGTACCTGATCGAGGCTCTCGGGGACAGGAGCGTGGATGTGGCA
ATCACCCCGAATGGCTATGCCGACGGCTTGGCCACTCAAAATGGACAGGA
GTACTTCGTTTTGCCGCTGGAGACGAAAATGAAGCTGTCCGAGGTGGTCC
GCCGCCTGGATGATCCCACTGGTGCTGTCCACTACATACAAAAGCAGAAC
TCTAACCTCAGTGTGGACCTACCGGAACTGGCTGCTGATCTGCGGGTCAG
TGATCTCGACTTTGCGCAGCAGTCCTTTAACAAACCGCCTGATGCTGTTA
ACTTTTGGCTGGGCGACGAGCGCGCCGTTACCTCCATGCACAAGGATCCA
TACGAGAACGTGTACTGCGTGATATCCGGTCACAAGGACTTCGTTCTCAT
CCCGCCGCACCAGCTTAGCTGCGTACCGCGAGGAATTTACCCTACAGGCG
TTTACAAGACCTCAGATAGTGGTCAGTTCTACATTGAACCGTTGAGGGAT
GAGGAAGGCAGCGATCAGTTCACAGAATGGGTCAGCGTTGATCCCTTGTC
ACCCGACCTGGCCAAATATCCGGAGTACGCCCGGGCCAAGCCTCTGAAAG
TACGTGTTCACGCGGGAGACATCCTATACCTGCCCCACTACTGGTTCCAC
CATGTGTCCCCAAGCCACAAGTGCATCGCCGTGAACTTCTGGTACGATCT
GGACTACGATAGCCGGTACTGC
BO06935.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10133-PA | 951 | CG10133-RA | 1..906 | 17..922 | 4480 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:24:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10133-RA | 1097 | CG10133-RA | 24..930 | 16..922 | 4505 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:23:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13449354..13450260 | 922..16 | 4505 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 05:23:59 has no hits.
BO06935.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:12 Download gff for
BO06935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-PA | 1..906 | 17..922 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:41:39 Download gff for
BO06935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-PA | 1..906 | 17..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:01:50 Download gff for
BO06935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 21..930 | 13..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:55:02 Download gff for
BO06935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 21..930 | 13..922 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:55:02 Download gff for
BO06935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13449354..13450263 | 13..922 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:01:50 Download gff for
BO06935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13442454..13443363 | 13..922 | 99 | | Minus |
BO06935.complete Sequence
982 bp (982 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ630599
> BO06935.complete
GAAGTTATCAGTCGACATGTCCGAGGTCGAAAGAGCTCTGGATGTTCTGC
TCCAGGAAGCGGAGGAGCTGTGCATCGGGAGCAGCGTAGTGGAGCTGGAC
AGGATTCCAACCGCCTTGGAGTTTTGTCGGGAATTCTACTCCAAAAACCA
GCCGGTGGTCATTCGCAAGGCACTCAATTGGCCCGCGATTGGCAAATGGA
CGCCAAAGTACCTGATCGAGGCTCTCGGGGACAGGAGCGTGGATGTGGCA
ATCACCCCGAATGGCTATGCCGACGGCTTGGCCACTCAAAATGGACAGGA
GTACTTCGTTTTGCCGCTGGAGACGAAAATGAAGCTGTCCGAGGTGGTCC
GCCGCCTGGATGATCCCACTGGTGCTGTCCACTACATACAAAAGCAGAAC
TCTAACCTCAGTGTGGACCTACCGGAACTGGCTGCTGATCTGCGGGTCAG
TGATCTCGACTTTGCGCAGCAGTCCTTTAACAAACCGCCTGATGCTGTTA
ACTTTTGGCTGGGCGACGAGCGCGCCGTTACCTCCATGCACAAGGATCCA
TACGAGAACGTGTACTGCGTGATATCCGGTCACAAGGACTTCGTTCTCAT
CCCGCCGCACCAGCTTAGCTGCGTACCGCGAGGAATTTACCCTACAGGCG
TTTACAAGACCTCAGATAGTGGTCAGTTCTACATTGAACCGTTGAGGGAT
GAGGAAGGCAGCGATCAGTTCACAGAATGGGTCAGCGTTGATCCCTTGTC
ACCCGACCTGGCCAAATATCCGGAGTACGCCCGGGCCAAGCCTCTGAAAG
TACGTGTTCACGCGGGAGACATCCTATACCTGCCCAACTACTGGTTCCAC
CATGTGTCCCAAAGCCACAAGTGCATCGCCGTGAACTTCTGGTACGATCT
GGACTACGATAGCCGGTACTGCTACTACCGCATGCTGGAGCAGATGACGT
CCGCAAGGAGTGGCGCAAGCTTTCTAGACCAT
BO06935.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:11:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10133-RA | 951 | CG10133-PA | 1..948 | 17..964 | 4740 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:11:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10133-RA | 1097 | CG10133-RA | 24..972 | 16..964 | 4745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13449312..13450260 | 964..16 | 4745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:11:03 has no hits.
BO06935.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:19:44 Download gff for
BO06935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 1..951 | 17..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:33 Download gff for
BO06935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 101..1055 | 13..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:05 Download gff for
BO06935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 25..972 | 17..966 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:19:45 Download gff for
BO06935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 101..1055 | 13..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:12:40 Download gff for
BO06935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 25..972 | 17..966 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:12:40 Download gff for
BO06935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13449310..13450259 | 17..966 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:05 Download gff for
BO06935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13442410..13443359 | 17..966 | 99 | | Minus |
BO06935.pep Sequence
Translation from 16 to 982
> BO06935.pep
MSEVERALDVLLQEAEELCIGSSVVELDRIPTALEFCREFYSKNQPVVIR
KALNWPAIGKWTPKYLIEALGDRSVDVAITPNGYADGLATQNGQEYFVLP
LETKMKLSEVVRRLDDPTGAVHYIQKQNSNLSVDLPELAADLRVSDLDFA
QQSFNKPPDAVNFWLGDERAVTSMHKDPYENVYCVISGHKDFVLIPPHQL
SCVPRGIYPTGVYKTSDSGQFYIEPLRDEEGSDQFTEWVSVDPLSPDLAK
YPEYARAKPLKVRVHAGDILYLPNYWFHHVSQSHKCIAVNFWYDLDYDSR
YCYYRMLEQMTSARSGASFLDH
BO06935.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10133-PA | 316 | CG10133-PA | 1..316 | 1..316 | 1691 | 100 | Plus |
| CG13902-PC | 394 | CG13902-PC | 162..394 | 31..294 | 204 | 24.7 | Plus |
| CG13902-PB | 401 | CG13902-PB | 169..401 | 31..294 | 204 | 24.7 | Plus |
