Clone BO06951 Report

Search the DGRC for BO06951

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:69
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG10934-RA
Protein status:BO06951.pep: full length peptide match
Sequenced Size:616

Clone Sequence Records

BO06951.3prime Sequence

614 bp (613 high quality bases) assembled on 2005-12-03

> BO06951.3prime
ATGGTCTAGAAAGCTTGCTTTTTTGCGACCACGCACGGTGCTCTTCTTGG
GTGTTGATCGCTGGTTGCTCTTTCGGGTAGGACGCCGCGGACCATCGCCT
AAGTTCTCATCTGTCTCATAGTATCTGTACGTCCGGCGATTTGGTAGGGC
GTAGTCCAGGGCATGAGTGACCATTATCGCCTTGTAGGTGCACGCCACGG
ACATGATAAGCTGCCCCAAATAGTAGACATCTTGGCGCAAAAACATAAAG
ACTTTTGGATAGGCTTCAAAAAGGTACATGCCGGTACGAGTATTAACTGC
ATTGTCCCGCAGTTTATTCATATGGCTGAGCAACTGGAGCCACACAAGCA
CCACGACCTGGGTGCACATATAGAAGACCAACAGTTCCAGCAGCAAAAGC
CAAAGCTTCTGCAGCGGTGCGCAATTCATTACCCTCAGATGATGGAGAAA
AAGCACGGCGGTCAGGACGAACAGCGCCGACGGAAGATCGGGAATATGCT
CCATGGGCAGCACATTGCATCCGGCGATGTATAGACACACGCATCCCACG
CTGCCAGCCACCAGCTCCGTGACTTCGTACATTCCCTGTACAACCACCAT
GTCGACTGATAACT

BO06951.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-PA 585 CG10934-RA 1..582 600..19 2910 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-RA 1043 CG10934-RA 80..661 600..19 2910 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:29:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17722418..17722999 600..19 2910 100 Minus
Blast to na_te.dros performed on 2015-02-13 12:29:38 has no hits.

BO06951.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:41 Download gff for BO06951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-PA 1..585 18..600 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:42:19 Download gff for BO06951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-PA 1..585 18..600 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:02:01 Download gff for BO06951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 9..600 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:38:44 Download gff for BO06951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 9..600 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:38:44 Download gff for BO06951.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 17722418..17723010 9..600 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:02:01 Download gff for BO06951.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13609923..13610515 9..600 99   Minus

BO06951.5prime Sequence

614 bp (613 high quality bases) assembled on 2005-12-03

> BO06951.5prime
GAAGTTATCAGTCGACATGGTGGTTGTACAGGGAATGTACGAAGTCACGG
AGCTGGTGGCTGGCAGCGTGGGATGCGTGTGTCTATACATCGCCGGATGC
AATGTGCTGCCCATGGAGCATATTCCCGATCTTCCGTCGGCGCTGTTCGT
CCTGACCGCCGTGCTTTTTCTCCATCATCTGAGGGTAATGAATTGCGCAC
CGCTGCAGAAGCTTTGGCTTTTGCTGCTGGAACTGTTGGTCTTCTATATG
TGCACCCAGGTCGTGGTGCTTGTGTGGCTCCAGTTGCTCAGCCATATGAA
TAAACTGCGGGACAATGCAGTTAATACTCGTACCGGCATGTACCTTTTTG
AAGCCTATCCAAAAGTCTTTATGTTTTTGCGCCAAGATGTCTACTATTTG
GGGCAGCTTATCATGTCCGTGGCGTGCACCTACAAGGCGATAATGGTCAC
TCATGCCCTGGACTACGCCCTACCAAATCGCCGGACGTACAGATACTATG
AGACAGATGAGAACTTAGGCGATGGTCCGCGGCGTCCTACCCGAAAGAGC
AACCAGCGATCAACACCCAAGAAGAGCACCGTGCGTGGTCGCAAAAAAGC
AAGCTTTCTAGACC

BO06951.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-PA 585 CG10934-RA 1..582 17..598 2910 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-RA 1043 CG10934-RA 80..661 17..598 2910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:06:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17722418..17722999 17..598 2910 100 Plus
Blast to na_te.dros performed on 2015-02-12 07:06:41 has no hits.

BO06951.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:41 Download gff for BO06951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-PA 1..585 17..599 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:42:20 Download gff for BO06951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-PA 1..585 17..599 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:34:26 Download gff for BO06951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 17..608 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:17:34 Download gff for BO06951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 17..608 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:17:34 Download gff for BO06951.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17722418..17723010 17..608 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:34:26 Download gff for BO06951.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13609923..13610515 17..608 99   Plus

BO06951.complete Sequence

616 bp (616 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ630604

> BO06951.complete
GAAGTTATCAGTCGACATGGTGGTTGTACAGGGAATGTACGAAGTCACGG
AGCTGGTGGCTGGCAGCGTGGGATGCGTGTGTCTATACATCGCCGGATGC
AATGTGCTGCCCATGGAGCATATTCCCGATCTTCCGTCGGCGCTGTTCGT
CCTGACCGCCGTGCTTTTTCTCCATCATCTGAGGGTAATGAATTGCGCAC
CGCTGCAGAAGCTTTGGCTTTTGCTGCTGGAACTGTTGGTCTTCTATATG
TGCACCCAGGTCGTGGTGCTTGTGTGGCTCCAGTTGCTCAGCCATATGAA
TAAACTGCGGGACAATGCAGTTAATACTCGTACCGGCATGTACCTTTTTG
AAGCCTATCCAAAAGTCTTTATGTTTTTGCGCCAAGATGTCTACTATTTG
GGGCAGCTTATCATGTCCGTGGCGTGCACCTACAAGGCGATAATGGTCAC
TCATGCCCTGGACTACGCCCTACCAAATCGCCGGACGTACAGATACTATG
AGACAGATGAGAACTTAGGCGATGGTCCGCGGCGTCCTACCCGAAAGAGC
AACCAGCGATCAACACCCAAGAAGAGCACCGTGCGTGGTCGCAAAAAAGC
AAGCTTTCTAGACCAT

BO06951.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-RA 585 CG10934-PA 1..582 17..598 2910 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-RA 1043 CG10934-RA 80..661 17..598 2910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17722418..17722999 17..598 2910 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:10:14 has no hits.

BO06951.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:19:49 Download gff for BO06951.complete
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 1..585 17..599 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:39 Download gff for BO06951.complete
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 17..608 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:49:07 Download gff for BO06951.complete
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..655 17..592 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:19:49 Download gff for BO06951.complete
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 17..608 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:14 Download gff for BO06951.complete
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..655 17..592 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:14 Download gff for BO06951.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17722418..17722993 17..592 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:49:07 Download gff for BO06951.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13609923..13610498 17..592 100   Plus

BO06951.pep Sequence

Translation from 16 to 616

> BO06951.pep
MVVVQGMYEVTELVAGSVGCVCLYIAGCNVLPMEHIPDLPSALFVLTAVL
FLHHLRVMNCAPLQKLWLLLLELLVFYMCTQVVVLVWLQLLSHMNKLRDN
AVNTRTGMYLFEAYPKVFMFLRQDVYYLGQLIMSVACTYKAIMVTHALDY
ALPNRRTYRYYETDENLGDGPRRPTRKSNQRSTPKKSTVRGRKKASFLDH

BO06951.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-PA 194 CG10934-PA 1..194 1..194 1019 100 Plus