Clone Sequence Records
BO06951.3prime Sequence
614 bp (613 high quality bases) assembled on 2005-12-03
> BO06951.3prime
ATGGTCTAGAAAGCTTGCTTTTTTGCGACCACGCACGGTGCTCTTCTTGG
GTGTTGATCGCTGGTTGCTCTTTCGGGTAGGACGCCGCGGACCATCGCCT
AAGTTCTCATCTGTCTCATAGTATCTGTACGTCCGGCGATTTGGTAGGGC
GTAGTCCAGGGCATGAGTGACCATTATCGCCTTGTAGGTGCACGCCACGG
ACATGATAAGCTGCCCCAAATAGTAGACATCTTGGCGCAAAAACATAAAG
ACTTTTGGATAGGCTTCAAAAAGGTACATGCCGGTACGAGTATTAACTGC
ATTGTCCCGCAGTTTATTCATATGGCTGAGCAACTGGAGCCACACAAGCA
CCACGACCTGGGTGCACATATAGAAGACCAACAGTTCCAGCAGCAAAAGC
CAAAGCTTCTGCAGCGGTGCGCAATTCATTACCCTCAGATGATGGAGAAA
AAGCACGGCGGTCAGGACGAACAGCGCCGACGGAAGATCGGGAATATGCT
CCATGGGCAGCACATTGCATCCGGCGATGTATAGACACACGCATCCCACG
CTGCCAGCCACCAGCTCCGTGACTTCGTACATTCCCTGTACAACCACCAT
GTCGACTGATAACT
BO06951.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-PA | 585 | CG10934-RA | 1..582 | 600..19 | 2910 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:29:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-RA | 1043 | CG10934-RA | 80..661 | 600..19 | 2910 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:29:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17722418..17722999 | 600..19 | 2910 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:29:38 has no hits.
BO06951.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:41 Download gff for
BO06951.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-PA | 1..585 | 18..600 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:42:19 Download gff for
BO06951.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-PA | 1..585 | 18..600 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:02:01 Download gff for
BO06951.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..672 | 9..600 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:38:44 Download gff for
BO06951.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..672 | 9..600 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:38:44 Download gff for
BO06951.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17722418..17723010 | 9..600 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:02:01 Download gff for
BO06951.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13609923..13610515 | 9..600 | 99 | | Minus |
BO06951.5prime Sequence
614 bp (613 high quality bases) assembled on 2005-12-03
> BO06951.5prime
GAAGTTATCAGTCGACATGGTGGTTGTACAGGGAATGTACGAAGTCACGG
AGCTGGTGGCTGGCAGCGTGGGATGCGTGTGTCTATACATCGCCGGATGC
AATGTGCTGCCCATGGAGCATATTCCCGATCTTCCGTCGGCGCTGTTCGT
CCTGACCGCCGTGCTTTTTCTCCATCATCTGAGGGTAATGAATTGCGCAC
CGCTGCAGAAGCTTTGGCTTTTGCTGCTGGAACTGTTGGTCTTCTATATG
TGCACCCAGGTCGTGGTGCTTGTGTGGCTCCAGTTGCTCAGCCATATGAA
TAAACTGCGGGACAATGCAGTTAATACTCGTACCGGCATGTACCTTTTTG
AAGCCTATCCAAAAGTCTTTATGTTTTTGCGCCAAGATGTCTACTATTTG
GGGCAGCTTATCATGTCCGTGGCGTGCACCTACAAGGCGATAATGGTCAC
TCATGCCCTGGACTACGCCCTACCAAATCGCCGGACGTACAGATACTATG
AGACAGATGAGAACTTAGGCGATGGTCCGCGGCGTCCTACCCGAAAGAGC
AACCAGCGATCAACACCCAAGAAGAGCACCGTGCGTGGTCGCAAAAAAGC
AAGCTTTCTAGACC
BO06951.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:52:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-PA | 585 | CG10934-RA | 1..582 | 17..598 | 2910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-RA | 1043 | CG10934-RA | 80..661 | 17..598 | 2910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:06:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17722418..17722999 | 17..598 | 2910 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 07:06:41 has no hits.
BO06951.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:04:41 Download gff for
BO06951.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-PA | 1..585 | 17..599 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:42:20 Download gff for
BO06951.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-PA | 1..585 | 17..599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:34:26 Download gff for
BO06951.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..672 | 17..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:17:34 Download gff for
BO06951.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..672 | 17..608 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:17:34 Download gff for
BO06951.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17722418..17723010 | 17..608 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:34:26 Download gff for
BO06951.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13609923..13610515 | 17..608 | 99 | | Plus |
BO06951.complete Sequence
616 bp (616 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ630604
> BO06951.complete
GAAGTTATCAGTCGACATGGTGGTTGTACAGGGAATGTACGAAGTCACGG
AGCTGGTGGCTGGCAGCGTGGGATGCGTGTGTCTATACATCGCCGGATGC
AATGTGCTGCCCATGGAGCATATTCCCGATCTTCCGTCGGCGCTGTTCGT
CCTGACCGCCGTGCTTTTTCTCCATCATCTGAGGGTAATGAATTGCGCAC
CGCTGCAGAAGCTTTGGCTTTTGCTGCTGGAACTGTTGGTCTTCTATATG
TGCACCCAGGTCGTGGTGCTTGTGTGGCTCCAGTTGCTCAGCCATATGAA
TAAACTGCGGGACAATGCAGTTAATACTCGTACCGGCATGTACCTTTTTG
AAGCCTATCCAAAAGTCTTTATGTTTTTGCGCCAAGATGTCTACTATTTG
GGGCAGCTTATCATGTCCGTGGCGTGCACCTACAAGGCGATAATGGTCAC
TCATGCCCTGGACTACGCCCTACCAAATCGCCGGACGTACAGATACTATG
AGACAGATGAGAACTTAGGCGATGGTCCGCGGCGTCCTACCCGAAAGAGC
AACCAGCGATCAACACCCAAGAAGAGCACCGTGCGTGGTCGCAAAAAAGC
AAGCTTTCTAGACCAT
BO06951.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:10:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-RA | 585 | CG10934-PA | 1..582 | 17..598 | 2910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:10:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-RA | 1043 | CG10934-RA | 80..661 | 17..598 | 2910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:10:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17722418..17722999 | 17..598 | 2910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:10:14 has no hits.
BO06951.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:19:49 Download gff for
BO06951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 1..585 | 17..599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:39 Download gff for
BO06951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..672 | 17..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:49:07 Download gff for
BO06951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..655 | 17..592 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:19:49 Download gff for
BO06951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..672 | 17..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:14 Download gff for
BO06951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..655 | 17..592 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:14 Download gff for
BO06951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17722418..17722993 | 17..592 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:49:07 Download gff for
BO06951.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13609923..13610498 | 17..592 | 100 | | Plus |
BO06951.pep Sequence
Translation from 16 to 616
> BO06951.pep
MVVVQGMYEVTELVAGSVGCVCLYIAGCNVLPMEHIPDLPSALFVLTAVL
FLHHLRVMNCAPLQKLWLLLLELLVFYMCTQVVVLVWLQLLSHMNKLRDN
AVNTRTGMYLFEAYPKVFMFLRQDVYYLGQLIMSVACTYKAIMVTHALDY
ALPNRRTYRYYETDENLGDGPRRPTRKSNQRSTPKKSTVRGRKKASFLDH
BO06951.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-PA | 194 | CG10934-PA | 1..194 | 1..194 | 1019 | 100 | Plus |