Clone BO06983 Report

Search the DGRC for BO06983

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:69
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptEndoG-RA
Protein status:BO06983.pep: Imported from assembly
Sequenced Size:964

Clone Sequence Records

BO06983.3prime Sequence

902 bp (817 high quality bases) assembled on 2005-12-03

> BO06983.3prime
ATGGTCTAGAAAGCTTGCGACTTTTTTGCCATTGATGGTGGTTAGCTGCT
TGCGATTGATTTGATCGAAGAAGAGCAATCCCGCCGAGCGTTCCACGCTC
TCTGGCGGCACCTGAAACACACTGATGGGAGTGTCGTTGCTGATCACCTG
ATTGGGCATCACGTACGACTCCATGTGGAGTTTGTGGTCCGCGGACTCGC
CCACAATAACCTTGTAGAAGTGGGTGGGAACAGCCACGGTGTTGGCGCCG
ATGACCTCGTACTTGACATACGATTTCCCATCGTCCTCCTTGTGCGGTAG
GTACAGTGGACCCGTACAGACGTACACATTGGAGTAGGTCTTGGTCAGTC
TGCGCACGTGTGCCTCCAGCGTGTTCCAGGCATCCCGGTTGAAGCCCTGG
CCCACCTGTGGCGCCATGTTCGATAGGTAGAAGGTTTCGTCGCAGTGCTT
CTGGTGCAGTCGGTGATTTCCAGCGGCGGCCATGTGCCCGCGATCATAGC
CCGATCGTCGGTAGTCCGTGTTCTGTGACCTGAAGAACGGATGGATGCTC
TCGTCCTGCTTGAAATCGCACTTCGATCTGTCCACGGCATCGTTCTTCGC
CACCGACTCTGCCGTAAGGTGCTCGAACACCCAGTGGGGCACCCGGTTCC
TCCGATCGTAAGACAGCACGTAGTCCGAATGGGAGCGCACGTGATCGAGT
CCGGGAAATCCATACTTCATGATCTGTCCGATCCGAGACGGAGTTGCCGT
CAAGCTTACATTGTTCTCTTGGGCGGGAATCAAACTGGCAGCCGAAACAG
TTCCAAAGGTGGGCAGACCAGGCAGCCGCGGAAGGCCACTTGTGGAGCCA
TTGTGCTGGCGTTCGCGTTTCACGTGGGTGCCCAGATAAAAGGCGCCCCA
GG

BO06983.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:53:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG8862-PA 933 CG8862-RA 51..930 898..19 4350 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
EndoG-RA 1124 CG8862-RA 131..1010 898..19 4370 99.8 Minus
Tengl2-RA 1018 CG32463-RA 476..576 486..386 250 83.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:08:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12177544..12178423 19..898 4370 99.8 Plus
2L 23513712 2L 2238746..2238846 386..486 250 83.2 Plus
Blast to na_te.dros performed on 2015-02-11 05:08:36 has no hits.

BO06983.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:05:42 Download gff for BO06983.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8862-PA 48..933 18..902 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:43:39 Download gff for BO06983.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8862-PA 48..933 18..902 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:20:37 Download gff for BO06983.3prime
Subject Subject Range Query Range Percent Splice Strand
EndoG-RA 128..1010 19..902 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:32:12 Download gff for BO06983.3prime
Subject Subject Range Query Range Percent Splice Strand
EndoG-RA 128..1010 19..902 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:32:12 Download gff for BO06983.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12177544..12178426 19..902 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:20:37 Download gff for BO06983.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8065049..8065931 19..902 99   Plus

BO06983.5prime Sequence

918 bp (823 high quality bases) assembled on 2005-12-03

> BO06983.5prime
GAAGTTATCAGTCGACATGAGTGCTCCTCGAGTGGGTGGCGTATTAGCTT
TGGGTGCCACCGCCCTGGGCGCCTTTTATCTGGGCACCCACGTGGAACGC
GAACGCCAGCACAATGGCTCCACAAGTGGCCTTCCGCGGCTGCCTGGTCT
GCCCACCTTTGGAACTGTTTCGGCTGCCAGTTTGATTCCCGCCCAAGAGA
ACAATGTAAGCTTGACGGCAACTCCGTCTCGGATCGGACAGATCATGAAG
TATGGATTTCCCGGACTCGATCACGTGCGCTCCCATTCGGACTACGTGCT
GTCTTACGATCGGAGGAACCGGGTGCCCCACTGGGTGTTCGAGCACCTTA
CGGCAGAGTCGGTGGCGAAGAACGATGCCGTGGACAGATCGAAGTGCGAT
TTCAAGCAGGACGAGAGCATCCATCCGTTCTTCAGGTCACAGAACACGGA
CTACCGACGATCGGGCTATGATCGCGGGCACATGGCCGCCGCTGGAAATC
ACCGACTGCACCAGAAGCACTGCGACGAAACCTTCTACCTATCGAACATG
GCGCCACAGGTGGGCCAGGGCTTCAACCGGGATGCCTGGAACACGCTGGA
GGCACACGTGCGCAGACTGACCAAGACCTACTCCAATGTGTACGTCTGTA
CGGGTCCACTGTACCTACCGCACAAGGAGGACGATGGGAAATCGTATGTC
AAGTACGAGGTCATCGGCGCCAACACCGTGGCTGTTCCCACCCACTTCTA
CAAGGTTATTGTGGGCGAGTCCGCGGACCACAAACTCCACATGGAGTCGT
ACGTGATGCCCAATCAGGTGATCAGCAACGACACTCCCATCAGTGTGTTT
CAGGTGCCGCCAGAGAGCGTGGAACGCTCGGCGGGATTGCTCTTCTTCGA
TCAAATCAATCGCAAGCA

BO06983.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:53:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG8862-PA 933 CG8862-RA 1..902 17..918 4510 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:15:27
Subject Length Description Subject Range Query Range Score Percent Strand
EndoG-RA 1124 CG8862-RA 81..982 17..918 4510 100 Plus
Tengl2-RA 1018 CG32463-RA 476..576 479..579 250 83.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:15:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12177572..12178473 918..17 4510 100 Minus
2L 23513712 2L 2238746..2238846 579..479 250 83.2 Minus
Blast to na_te.dros performed on 2015-02-10 17:15:23 has no hits.

BO06983.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:05:44 Download gff for BO06983.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8862-PA 1..901 17..917 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:43:40 Download gff for BO06983.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8862-PA 1..901 17..917 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:03:37 Download gff for BO06983.5prime
Subject Subject Range Query Range Percent Splice Strand
EndoG-RA 81..981 17..917 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:11 Download gff for BO06983.5prime
Subject Subject Range Query Range Percent Splice Strand
EndoG-RA 81..981 17..917 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:11 Download gff for BO06983.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12177573..12178468 22..917 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:03:37 Download gff for BO06983.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8065078..8065973 22..917 100 <- Minus

BO06983.complete Sequence

964 bp assembled on 2008-08-15

GenBank Submission: FJ630616

> BO06983.complete
GAAGTTATCAGTCGACATGAGTGCTCCTCGAGTGGGTGGCGTATTAGCTT
TGGGTGCCACCGCCCTGGGCGCCTTTTATCTGGGCACCCACGTGGAACGC
GAACGCCAGCACAATGGCTCCACAAGTGGCCTTCCGCGGCTGCCTGGTCT
GCCCACCTTTGGAACTGTTTCGGCTGCCAGTTTGATTCCCGCCCAAGAGA
ACAATGTAAGCTTGACGGCAACTCCGTCTCGGATCGGACAGATCATGAAG
TATGGATTTCCCGGACTCGATCACGTGCGCTCCCATTCGGACTACGTGCT
GTCTTACGATCGGAGGAACCGGGTGCCCCACTGGGTGTTCGAGCACCTTA
CGGCAGAGTCGGTGGCGAAGAACGATGCCGTGGACAGATCGAAGTGCGAT
TTCAAGCAGGACGAGAGCATCCATCCGTTCTTCAGGTCACAGAACACGGA
CTACCGACGATCGGGCTATGATCGCGGGCACATGGCCGCCGCTGGAAATC
ACCGACTGCACCAGAAGCACTGCGACGAAACCTTCTACCTATCGAACATG
GCGCCACAGGTGGGCCAGGGCTTCAACCGGGATGCCTGGAACACGCTGGA
GGCACACGTGCGCAGACTGACCAAGACCTACTCCAATGTGTACGTCTGTA
CGGGTCCACTGTACCTACCGCACAAGGAGGACGATGGGAAATCGTATGTC
AAGTACGAGGTCATCGGCGCCAACACCGTGGCTGTTCCCACCCACTTCTA
CAAGGTTATTGTGGGCGAGTCCGCGGACCACAAACTCCACATGGAGTCGT
ACGTGATGCCCAATCAGGTGATCAGCAACGACACTCCCATCAGTGTGTTT
CAGGTGCCGCCAGAGAGCGTGGAACGCTCGGCGGGATTGCTCTTCTTCGA
TCAAATCAATCGCAAGCAGCTAACCACCATCAATGGCAAAAAAGTCGCAA
GCTTTCTAGACCAT

BO06983.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:13:44
Subject Length Description Subject Range Query Range Score Percent Strand
EndoG-RA 933 CG8862-PA 1..930 17..946 4635 99.9 Plus
Tengl2-RA 957 CG32463-PA 457..557 479..579 250 83.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:45
Subject Length Description Subject Range Query Range Score Percent Strand
EndoG-RA 1124 CG8862-RA 81..1010 17..946 4635 99.9 Plus
Tengl2-RA 1018 CG32463-RA 476..576 479..579 250 83.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12177544..12178473 946..17 4635 99.9 Minus
2L 23513712 2L 2238746..2238846 579..479 250 83.2 Minus
Blast to na_te.dros performed on 2014-11-27 08:13:42 has no hits.

BO06983.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:44:42 Download gff for BO06983.complete
Subject Subject Range Query Range Percent Splice Strand
CG8862-RA 58..987 17..946 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:08:58 Download gff for BO06983.complete
Subject Subject Range Query Range Percent Splice Strand
EndoG-RA 81..1010 17..948 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:35 Download gff for BO06983.complete
Subject Subject Range Query Range Percent Splice Strand
CG8862-RA 58..987 17..948 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:13:34 Download gff for BO06983.complete
Subject Subject Range Query Range Percent Splice Strand
EndoG-RA 81..1010 17..948 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:13:34 Download gff for BO06983.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12177542..12178473 17..948 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:08:58 Download gff for BO06983.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8065047..8065978 17..948 99   Minus

BO06983.pep Sequence

Translation from 16 to 964

> BO06983.pep
MSAPRVGGVLALGATALGAFYLGTHVERERQHNGSTSGLPRLPGLPTFGT
VSAASLIPAQENNVSLTATPSRIGQIMKYGFPGLDHVRSHSDYVLSYDRR
NRVPHWVFEHLTAESVAKNDAVDRSKCDFKQDESIHPFFRSQNTDYRRSG
YDRGHMAAAGNHRLHQKHCDETFYLSNMAPQVGQGFNRDAWNTLEAHVRR
LTKTYSNVYVCTGPLYLPHKEDDGKSYVKYEVIGANTVAVPTHFYKVIVG
ESADHKLHMESYVMPNQVISNDTPISVFQVPPESVERSAGLLFFDQINRK
QLTTINGKKVASFLDH

BO06983.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
EndoG-PA 310 CG8862-PA 1..310 1..310 1647 100 Plus
Tengl2-PA 318 CG32463-PA 15..302 8..302 675 47.8 Plus
Tengl4-PA 378 CG4683-PA 133..364 73..302 398 36.1 Plus
Tengl1-PA 319 CG31682-PA 1..280 1..304 260 27.1 Plus
Tengl3-PA 337 CG31679-PA 102..292 67..293 218 28.4 Plus