Clone Sequence Records
BO06983.3prime Sequence
902 bp (817 high quality bases) assembled on 2005-12-03
> BO06983.3prime
ATGGTCTAGAAAGCTTGCGACTTTTTTGCCATTGATGGTGGTTAGCTGCT
TGCGATTGATTTGATCGAAGAAGAGCAATCCCGCCGAGCGTTCCACGCTC
TCTGGCGGCACCTGAAACACACTGATGGGAGTGTCGTTGCTGATCACCTG
ATTGGGCATCACGTACGACTCCATGTGGAGTTTGTGGTCCGCGGACTCGC
CCACAATAACCTTGTAGAAGTGGGTGGGAACAGCCACGGTGTTGGCGCCG
ATGACCTCGTACTTGACATACGATTTCCCATCGTCCTCCTTGTGCGGTAG
GTACAGTGGACCCGTACAGACGTACACATTGGAGTAGGTCTTGGTCAGTC
TGCGCACGTGTGCCTCCAGCGTGTTCCAGGCATCCCGGTTGAAGCCCTGG
CCCACCTGTGGCGCCATGTTCGATAGGTAGAAGGTTTCGTCGCAGTGCTT
CTGGTGCAGTCGGTGATTTCCAGCGGCGGCCATGTGCCCGCGATCATAGC
CCGATCGTCGGTAGTCCGTGTTCTGTGACCTGAAGAACGGATGGATGCTC
TCGTCCTGCTTGAAATCGCACTTCGATCTGTCCACGGCATCGTTCTTCGC
CACCGACTCTGCCGTAAGGTGCTCGAACACCCAGTGGGGCACCCGGTTCC
TCCGATCGTAAGACAGCACGTAGTCCGAATGGGAGCGCACGTGATCGAGT
CCGGGAAATCCATACTTCATGATCTGTCCGATCCGAGACGGAGTTGCCGT
CAAGCTTACATTGTTCTCTTGGGCGGGAATCAAACTGGCAGCCGAAACAG
TTCCAAAGGTGGGCAGACCAGGCAGCCGCGGAAGGCCACTTGTGGAGCCA
TTGTGCTGGCGTTCGCGTTTCACGTGGGTGCCCAGATAAAAGGCGCCCCA
GG
BO06983.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:53:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8862-PA | 933 | CG8862-RA | 51..930 | 898..19 | 4350 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:08:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
EndoG-RA | 1124 | CG8862-RA | 131..1010 | 898..19 | 4370 | 99.8 | Minus |
Tengl2-RA | 1018 | CG32463-RA | 476..576 | 486..386 | 250 | 83.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:08:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12177544..12178423 | 19..898 | 4370 | 99.8 | Plus |
2L | 23513712 | 2L | 2238746..2238846 | 386..486 | 250 | 83.2 | Plus |
Blast to na_te.dros performed on 2015-02-11 05:08:36 has no hits.
BO06983.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:05:42 Download gff for
BO06983.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8862-PA | 48..933 | 18..902 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:43:39 Download gff for
BO06983.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8862-PA | 48..933 | 18..902 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:20:37 Download gff for
BO06983.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
EndoG-RA | 128..1010 | 19..902 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:32:12 Download gff for
BO06983.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
EndoG-RA | 128..1010 | 19..902 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:32:12 Download gff for
BO06983.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12177544..12178426 | 19..902 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:20:37 Download gff for
BO06983.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8065049..8065931 | 19..902 | 99 | | Plus |
BO06983.5prime Sequence
918 bp (823 high quality bases) assembled on 2005-12-03
> BO06983.5prime
GAAGTTATCAGTCGACATGAGTGCTCCTCGAGTGGGTGGCGTATTAGCTT
TGGGTGCCACCGCCCTGGGCGCCTTTTATCTGGGCACCCACGTGGAACGC
GAACGCCAGCACAATGGCTCCACAAGTGGCCTTCCGCGGCTGCCTGGTCT
GCCCACCTTTGGAACTGTTTCGGCTGCCAGTTTGATTCCCGCCCAAGAGA
ACAATGTAAGCTTGACGGCAACTCCGTCTCGGATCGGACAGATCATGAAG
TATGGATTTCCCGGACTCGATCACGTGCGCTCCCATTCGGACTACGTGCT
GTCTTACGATCGGAGGAACCGGGTGCCCCACTGGGTGTTCGAGCACCTTA
CGGCAGAGTCGGTGGCGAAGAACGATGCCGTGGACAGATCGAAGTGCGAT
TTCAAGCAGGACGAGAGCATCCATCCGTTCTTCAGGTCACAGAACACGGA
CTACCGACGATCGGGCTATGATCGCGGGCACATGGCCGCCGCTGGAAATC
ACCGACTGCACCAGAAGCACTGCGACGAAACCTTCTACCTATCGAACATG
GCGCCACAGGTGGGCCAGGGCTTCAACCGGGATGCCTGGAACACGCTGGA
GGCACACGTGCGCAGACTGACCAAGACCTACTCCAATGTGTACGTCTGTA
CGGGTCCACTGTACCTACCGCACAAGGAGGACGATGGGAAATCGTATGTC
AAGTACGAGGTCATCGGCGCCAACACCGTGGCTGTTCCCACCCACTTCTA
CAAGGTTATTGTGGGCGAGTCCGCGGACCACAAACTCCACATGGAGTCGT
ACGTGATGCCCAATCAGGTGATCAGCAACGACACTCCCATCAGTGTGTTT
CAGGTGCCGCCAGAGAGCGTGGAACGCTCGGCGGGATTGCTCTTCTTCGA
TCAAATCAATCGCAAGCA
BO06983.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:53:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8862-PA | 933 | CG8862-RA | 1..902 | 17..918 | 4510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:15:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
EndoG-RA | 1124 | CG8862-RA | 81..982 | 17..918 | 4510 | 100 | Plus |
Tengl2-RA | 1018 | CG32463-RA | 476..576 | 479..579 | 250 | 83.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:15:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12177572..12178473 | 918..17 | 4510 | 100 | Minus |
2L | 23513712 | 2L | 2238746..2238846 | 579..479 | 250 | 83.2 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:15:23 has no hits.
BO06983.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:05:44 Download gff for
BO06983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8862-PA | 1..901 | 17..917 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:43:40 Download gff for
BO06983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8862-PA | 1..901 | 17..917 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:03:37 Download gff for
BO06983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
EndoG-RA | 81..981 | 17..917 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:11 Download gff for
BO06983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
EndoG-RA | 81..981 | 17..917 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:11 Download gff for
BO06983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12177573..12178468 | 22..917 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:03:37 Download gff for
BO06983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8065078..8065973 | 22..917 | 100 | <- | Minus |
BO06983.complete Sequence
964 bp assembled on 2008-08-15
GenBank Submission: FJ630616
> BO06983.complete
GAAGTTATCAGTCGACATGAGTGCTCCTCGAGTGGGTGGCGTATTAGCTT
TGGGTGCCACCGCCCTGGGCGCCTTTTATCTGGGCACCCACGTGGAACGC
GAACGCCAGCACAATGGCTCCACAAGTGGCCTTCCGCGGCTGCCTGGTCT
GCCCACCTTTGGAACTGTTTCGGCTGCCAGTTTGATTCCCGCCCAAGAGA
ACAATGTAAGCTTGACGGCAACTCCGTCTCGGATCGGACAGATCATGAAG
TATGGATTTCCCGGACTCGATCACGTGCGCTCCCATTCGGACTACGTGCT
GTCTTACGATCGGAGGAACCGGGTGCCCCACTGGGTGTTCGAGCACCTTA
CGGCAGAGTCGGTGGCGAAGAACGATGCCGTGGACAGATCGAAGTGCGAT
TTCAAGCAGGACGAGAGCATCCATCCGTTCTTCAGGTCACAGAACACGGA
CTACCGACGATCGGGCTATGATCGCGGGCACATGGCCGCCGCTGGAAATC
ACCGACTGCACCAGAAGCACTGCGACGAAACCTTCTACCTATCGAACATG
GCGCCACAGGTGGGCCAGGGCTTCAACCGGGATGCCTGGAACACGCTGGA
GGCACACGTGCGCAGACTGACCAAGACCTACTCCAATGTGTACGTCTGTA
CGGGTCCACTGTACCTACCGCACAAGGAGGACGATGGGAAATCGTATGTC
AAGTACGAGGTCATCGGCGCCAACACCGTGGCTGTTCCCACCCACTTCTA
CAAGGTTATTGTGGGCGAGTCCGCGGACCACAAACTCCACATGGAGTCGT
ACGTGATGCCCAATCAGGTGATCAGCAACGACACTCCCATCAGTGTGTTT
CAGGTGCCGCCAGAGAGCGTGGAACGCTCGGCGGGATTGCTCTTCTTCGA
TCAAATCAATCGCAAGCAGCTAACCACCATCAATGGCAAAAAAGTCGCAA
GCTTTCTAGACCAT
BO06983.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:13:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
EndoG-RA | 933 | CG8862-PA | 1..930 | 17..946 | 4635 | 99.9 | Plus |
Tengl2-RA | 957 | CG32463-PA | 457..557 | 479..579 | 250 | 83.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
EndoG-RA | 1124 | CG8862-RA | 81..1010 | 17..946 | 4635 | 99.9 | Plus |
Tengl2-RA | 1018 | CG32463-RA | 476..576 | 479..579 | 250 | 83.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12177544..12178473 | 946..17 | 4635 | 99.9 | Minus |
2L | 23513712 | 2L | 2238746..2238846 | 579..479 | 250 | 83.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:13:42 has no hits.
BO06983.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:44:42 Download gff for
BO06983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8862-RA | 58..987 | 17..946 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:08:58 Download gff for
BO06983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
EndoG-RA | 81..1010 | 17..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:35 Download gff for
BO06983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8862-RA | 58..987 | 17..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:13:34 Download gff for
BO06983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
EndoG-RA | 81..1010 | 17..948 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:13:34 Download gff for
BO06983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12177542..12178473 | 17..948 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:08:58 Download gff for
BO06983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8065047..8065978 | 17..948 | 99 | | Minus |
BO06983.pep Sequence
Translation from 16 to 964
> BO06983.pep
MSAPRVGGVLALGATALGAFYLGTHVERERQHNGSTSGLPRLPGLPTFGT
VSAASLIPAQENNVSLTATPSRIGQIMKYGFPGLDHVRSHSDYVLSYDRR
NRVPHWVFEHLTAESVAKNDAVDRSKCDFKQDESIHPFFRSQNTDYRRSG
YDRGHMAAAGNHRLHQKHCDETFYLSNMAPQVGQGFNRDAWNTLEAHVRR
LTKTYSNVYVCTGPLYLPHKEDDGKSYVKYEVIGANTVAVPTHFYKVIVG
ESADHKLHMESYVMPNQVISNDTPISVFQVPPESVERSAGLLFFDQINRK
QLTTINGKKVASFLDH
BO06983.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:41:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
EndoG-PA | 310 | CG8862-PA | 1..310 | 1..310 | 1647 | 100 | Plus |
Tengl2-PA | 318 | CG32463-PA | 15..302 | 8..302 | 675 | 47.8 | Plus |
Tengl4-PA | 378 | CG4683-PA | 133..364 | 73..302 | 398 | 36.1 | Plus |
Tengl1-PA | 319 | CG31682-PA | 1..280 | 1..304 | 260 | 27.1 | Plus |
Tengl3-PA | 337 | CG31679-PA | 102..292 | 67..293 | 218 | 28.4 | Plus |