Clone Sequence Records
BO06991.3prime Sequence
800 bp (794 high quality bases) assembled on 2005-12-03
> BO06991.3prime
ATGGTCTAGAAAGCTTGCCATCTGCCAGTGCATCGTGGGCGTAACCTCCT
TCAGCTGGCCCATGCTCACAATCCACATGCTGCCGTTCTTCATCATCTCC
ATCGCGTGGATCATTTGCATGGCTGCCTCCTCGGGCATTTGGCGCTTGGC
GCTCTCGATGGCCTCCACCATGGATTCGGAGTGGTGCCAGGTAACGTTGT
CGCGCAGGTTCATAATCATCTCGCTGTTGGTGAGTCCCGGGCACATGGCC
ATGAACATGACGCCGGTCTTTTGGTAGATCATCTTGTCGCCCATGGAGCG
GGTGAATCCGAGGATGCCGTGCATGGCAGCGGCGTAGACAGAAAAGGCGG
GCGCGGGTTCCAGGCCATAGACAGAGGACATGTTAACCACCATGCCACCC
ATGCCCATCTGTGTCTTGTCCATGTAGGGCATGGCCATCATCGTCGACTG
GATCATGCCAGTCAGATTCATGCCCATCGTAGTCTCCACATCCTTGTCGA
GCAGGACACCCTCGCCATTGATCATCACATCAATGTGTCCCATCATTTGA
CCCATTTTCTTCATCGCCTGTTCGATCGACATCTTTTCCATGAGGTTCAT
TTGCATGAAGACCACTTTCACGGATGGATTAATGGCCTGCAGCTTCTTCA
TCATCTTAACGTTCTCCATGCGATGCATAATGCCCATCATCTTGATGTCC
TTCTGCATCAGCTGCATCATCATCTGCCATCCAATGCCGCTGAAGCTGCC
CACATAGACAACATTCTTACCGGTCCAGTCAAACATGTCGACTGATAACT
BO06991.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:53:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3763-PA | 771 | Fbp2-RA | 1..768 | 786..19 | 3840 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:19:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-RC | 871 | CG3763-RC | 65..832 | 786..19 | 3840 | 100 | Minus |
Fbp2-RB | 1074 | CG3763-RB | 152..919 | 786..19 | 3840 | 100 | Minus |
Fbp2-RA | 916 | CG3763-RA | 76..843 | 786..19 | 3840 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:19:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9427318..9427762 | 463..19 | 2225 | 100 | Minus |
2L | 23513712 | 2L | 9426935..9427258 | 786..463 | 1620 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:19:21 has no hits.
BO06991.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:05:57 Download gff for
BO06991.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3763-PA | 1..771 | 15..786 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:43:58 Download gff for
BO06991.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3763-PA | 1..771 | 15..786 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:03:42 Download gff for
BO06991.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 11..793 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:42 Download gff for
BO06991.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 11..793 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:42 Download gff for
BO06991.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9426928..9427258 | 463..793 | 98 | -> | Minus |
2L | 9427319..9427772 | 11..462 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:03:42 Download gff for
BO06991.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9426928..9427258 | 463..793 | 98 | -> | Minus |
arm_2L | 9427319..9427772 | 11..462 | 99 | | Minus |
BO06991.5prime Sequence
800 bp (799 high quality bases) assembled on 2005-12-03
> BO06991.5prime
GAAGTTATCAGTCGACATGTTTGACTGGACCGGTAAGAATGTTGTCTATG
TGGGCAGCTTCAGCGGCATTGGATGGCAGATGATGATGCAGCTGATGCAG
AAGGACATCAAGATGATGGGCATTATGCATCGCATGGAGAACGTTAAGAT
GATGAAGAAGCTGCAGGCCATTAATCCATCCGTGAAAGTGGTCTTCATGC
AAATGAACCTCATGGAAAAGATGTCGATCGAACAGGCGATGAAGAAAATG
GGTCAAATGATGGGACACATTGATGTGATGATCAATGGCGAGGGTGTCCT
GCTCGACAAGGATGTGGAGACTACGATGGGCATGAATCTGACTGGCATGA
TCCAGTCGACGATGATGGCCATGCCCTACATGGACAAGACACAGATGGGC
ATGGGTGGCATGGTGGTTAACATGTCCTCTGTCTATGGCCTGGAACCCGC
GCCCGCCTTTTCTGTCTACGCCGCTGCCATGCACGGCATCCTCGGATTCA
CCCGCTCCATGGGCGACAAGATGATCTACCAAAAGACCGGCGTCATGTTC
ATGGCCATGTGCCCGGGACTCACCAACAGCGAGATGATTATGAACCTGCG
CGACAACGTTACCTGGCACCACTCCGAATCCATGGTGGAGGCCATCGAGA
GCGCCAAGCGCCAAATGCCCGAGGAGGCAGCCATGCAAATGATCCACGCG
ATGGAGATGATGAAGAACGGCAGCATGTGGATTGTGAGCATGGGCCAGCT
GAAGGAGGTTACGCCCACGATGCACTGGCAGATGGCAAGCTTTCTAGACC
BO06991.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:53:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3763-PA | 771 | Fbp2-RA | 1..768 | 17..784 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:15:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-RC | 871 | CG3763-RC | 65..832 | 17..784 | 3840 | 100 | Plus |
Fbp2-RB | 1074 | CG3763-RB | 152..919 | 17..784 | 3840 | 100 | Plus |
Fbp2-RA | 916 | CG3763-RA | 76..843 | 17..784 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:15:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9427318..9427762 | 340..784 | 2225 | 100 | Plus |
2L | 23513712 | 2L | 9426935..9427258 | 17..340 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:15:06 has no hits.
BO06991.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:05:57 Download gff for
BO06991.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3763-PA | 1..771 | 17..788 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:44:00 Download gff for
BO06991.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3763-PA | 1..771 | 17..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:10:00 Download gff for
BO06991.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 10..792 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:23:41 Download gff for
BO06991.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 10..792 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:23:41 Download gff for
BO06991.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9426928..9427258 | 10..340 | 98 | -> | Plus |
2L | 9427319..9427772 | 341..792 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:10:00 Download gff for
BO06991.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9426928..9427258 | 10..340 | 98 | -> | Plus |
arm_2L | 9427319..9427772 | 341..792 | 99 | | Plus |
BO06991.complete Sequence
802 bp (802 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ630619
> BO06991.complete
GAAGTTATCAGTCGACATGTTTGACTGGACCGGTAAGAATGTTGTCTATG
TGGGCAGCTTCAGCGGCATTGGATGGCAGATGATGATGCAGCTGATGCAG
AAGGACATCAAGATGATGGGCATTATGCATCGCATGGAGAACGTTAAGAT
GATGAAGAAGCTGCAGGCCATTAATCCATCCGTGAAAGTGGTCTTCATGC
AAATGAACCTCATGGAAAAGATGTCGATCGAACAGGCGATGAAGAAAATG
GGTCAAATGATGGGACACATTGATGTGATGATCAATGGCGAGGGTGTCCT
GCTCGACAAGGATGTGGAGACTACGATGGGCATGAATCTGACTGGCATGA
TCCAGTCGACGATGATGGCCATGCCCTACATGGACAAGACACAGATGGGC
ATGGGTGGCATGGTGGTTAACATGTCCTCTGTCTATGGCCTGGAACCCGC
GCCCGCCTTTTCTGTCTACGCCGCTGCCATGCACGGCATCCTCGGATTCA
CCCGCTCCATGGGCGACAAGATGATCTACCAAAAGACCGGCGTCATGTTC
ATGGCCATGTGCCCGGGACTCACCAACAGCGAGATGATTATGAACCTGCG
CGACAACGTTACCTGGCACCACTCCGAATCCATGGTGGAGGCCATCGAGA
GCGCCAAGCGCCAAATGCCCGAGGAGGCAGCCATGCAAATGATCCACGCG
ATGGAGATGATGAAGAACGGCAGCATGTGGATTGTGAGCATGGGCCAGCT
GAAGGAGGTTACGCCCACGATGCACTGGCAGATGGCAAGCTTTCTAGACC
AT
BO06991.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:09:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-RC | 771 | CG3763-PC | 1..768 | 17..784 | 3840 | 100 | Plus |
Fbp2-RB | 771 | CG3763-PB | 1..768 | 17..784 | 3840 | 100 | Plus |
Fbp2-RA | 771 | CG3763-PA | 1..768 | 17..784 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:09:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-RC | 871 | CG3763-RC | 65..832 | 17..784 | 3840 | 100 | Plus |
Fbp2-RB | 1074 | CG3763-RB | 152..919 | 17..784 | 3840 | 100 | Plus |
Fbp2-RA | 916 | CG3763-RA | 76..843 | 17..784 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:09:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9427318..9427762 | 340..784 | 2225 | 100 | Plus |
2L | 23513712 | 2L | 9426935..9427258 | 17..340 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:09:17 has no hits.
BO06991.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:19:42 Download gff for
BO06991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 1..771 | 17..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:29 Download gff for
BO06991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 10..792 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:57 Download gff for
BO06991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 82..843 | 23..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:19:42 Download gff for
BO06991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 10..792 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:00 Download gff for
BO06991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 82..843 | 23..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:00 Download gff for
BO06991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9426941..9427258 | 23..340 | 100 | -> | Plus |
2L | 9427319..9427762 | 341..786 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:57 Download gff for
BO06991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9426941..9427258 | 23..340 | 100 | -> | Plus |
arm_2L | 9427319..9427762 | 341..786 | 99 | | Plus |
BO06991.pep Sequence
Translation from 16 to 802
> BO06991.pep
MFDWTGKNVVYVGSFSGIGWQMMMQLMQKDIKMMGIMHRMENVKMMKKLQ
AINPSVKVVFMQMNLMEKMSIEQAMKKMGQMMGHIDVMINGEGVLLDKDV
ETTMGMNLTGMIQSTMMAMPYMDKTQMGMGGMVVNMSSVYGLEPAPAFSV
YAAAMHGILGFTRSMGDKMIYQKTGVMFMAMCPGLTNSEMIMNLRDNVTW
HHSESMVEAIESAKRQMPEEAAMQMIHAMEMMKNGSMWIVSMGQLKEVTP
TMHWQMASFLDH
BO06991.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-PC | 256 | CG3763-PC | 1..256 | 1..256 | 1333 | 100 | Plus |
Fbp2-PB | 256 | CG3763-PB | 1..256 | 1..256 | 1333 | 100 | Plus |
Fbp2-PA | 256 | CG3763-PA | 1..256 | 1..256 | 1333 | 100 | Plus |
CG4842-PA | 259 | CG4842-PA | 2..254 | 3..255 | 494 | 36 | Plus |
CG18814-PB | 267 | CG18814-PB | 2..254 | 3..254 | 463 | 34.4 | Plus |