Clone Sequence Records
BO07048.3prime Sequence
892 bp (832 high quality bases) assembled on 2005-12-03
> BO07048.3prime
ATGGTCTAGAAAGCTTGCCTGGGTCTTCAATTTACTCGCCTCCGCACGAT
TTTTTCGGATTTTACTTATAAGCGAAACGAAGACCCTTTGTAAGCATTTA
ATCAAAATAACGACGATCAGTAGGGAGACAAAAGTGATTGCGATGAGGAG
CCCCCAGGTGTCCAGTCCGTGGAACTGAATAAAATCCAGATCACGCGAAG
CACATCTCAAGTGTTTGGCTCCCTTATGCCGCAATACGTACTCGGTCCAC
CAAATGGCGCGCTCCAAAGCGGTTTCCTTCTGATCTCGGAATAATTTGGA
TTTAGTCTGAGCTGCTGCCGCATAACTGGGATTACTCAGCAATTCCTGGA
TCAAAGGCGTCAGTTCTGTCGCATTGACACTCCATATATCAGCACTGAGA
CCATAGCCTACCTGCTTGGCCCTCTGAACATTCAAGTGCTGATCATAGAA
AATGGGCAATCCAAGTATGGGCTTTCCAAAGTATATACTCTCGATGGTGC
TCAATAGACCTCCGTGGGTGATGAAGAGCTTAACATTCGGATGAGCGAGA
ATATCGGGTTGGGGGAACCACTTGCTGATGAAGACATTATCGGGTTTTTC
GGGCAACTGATCATCCTCGAATTTCCACAGCACACGTTGTGGCACACTGG
CAAAGGTTTGCATTAGCATTTTTCGTGTGGATGGCGGCAAGTCTTTGCTT
TTGATATTGGAACCCATGGAGAAATAGATTACTCCCTTCTCCGATTGCTC
GACAAATTCCGACAGTTCCTTTGCTAAGGGCTGAACCTTTCGCTTCTGTT
GTAAATGCAGTCCGCCCACCTCGATCATATTGGGCAAATAGGGGCGTGGA
TAGCTCAGGGAAAAGTGCTGGCCGAGAAGCATTAGCGCAAAG
BO07048.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:54:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6644-PA | 1614 | Ugt35a-RA | 738..1611 | 892..19 | 4370 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:32:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35a-RA | 1781 | CG6644-RA | 778..1651 | 892..19 | 4370 | 100 | Minus |
Ugt86Dd-RB | 1671 | CG6633-RB | 972..1191 | 633..414 | 395 | 78.6 | Minus |
Ugt35b-RA | 1672 | CG6649-RA | 977..1148 | 659..488 | 335 | 79.7 | Minus |
Ugt86Dd-RB | 1671 | CG6633-RB | 738..805 | 873..806 | 190 | 85.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:32:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11170947..11171820 | 19..892 | 4370 | 100 | Plus |
3R | 32079331 | 3R | 11127077..11127296 | 414..633 | 395 | 78.6 | Plus |
3R | 32079331 | 3R | 11169027..11169198 | 488..659 | 335 | 79.7 | Plus |
3R | 32079331 | 3R | 31394055..31394228 | 454..627 | 270 | 77 | Plus |
3R | 32079331 | 3R | 11164850..11165060 | 446..656 | 245 | 74.4 | Plus |
3R | 32079331 | 3R | 11127463..11127530 | 806..873 | 190 | 85.3 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:32:21 has no hits.
BO07048.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:07:39 Download gff for
BO07048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6644-PA | 738..1614 | 15..892 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:10 Download gff for
BO07048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6644-PA | 738..1614 | 15..892 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:31:11 Download gff for
BO07048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35a-RA | 778..1654 | 15..892 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:06:37 Download gff for
BO07048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35a-RA | 778..1654 | 15..892 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:06:37 Download gff for
BO07048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11170944..11171820 | 15..892 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:31:11 Download gff for
BO07048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6996666..6997542 | 15..892 | 99 | | Plus |
BO07048.5prime Sequence
828 bp (724 high quality bases) assembled on 2005-12-03
> BO07048.5prime
GAAGTTATCAGTCGACATGGGTGGAATATTTTCTGTAACTGGTCTTGGCA
TTCTGCTAATTGGCCTGATATGGCTGTTCGCCGCAAATGCCGATGAAGGG
GTTCAAAGTTCGCGCATATTGGCCGTGTTTCCTTTTCCCGGCCGATCGCA
GTACATTTTCGCTGAGCAGTTTATGAAGGAACTGGCCCATCGGGGTCACA
ATGTCACCGTAATCAATACCTTTGGTAGCGATAAAAACGAGCCCAACTTT
CGGGTGATTGGTGCTAAAAAAATTCACGAAATAATGGCGGCATTTGGAAA
TGCAGATTACACCCAAACGGCGAGTCAATGGCAAATGTTGACTATGACCA
CACAGTTTCTCAATCTTTTGACCACAAGTATCCTGGATGATGCGGCTGTA
AAGGATTTACTGAACAGCGGCGAGAAATTCGATTTGGTTATAATGGAAGC
GGTGCAAACCGAAGCCCTCTTCGGTTTGATCCAGCATTTTGGAGCAGAAA
CCATAGGTATCTCATCGTACGGCACAGATACACACATCGATGAGTTAATG
GGCAACATATCGCCATTGTCCTACAATCCCTTGCTACTCTCATCGCGAAC
GGAGCAAATGGATTTCAAGGATCGTGTGATGAATGTGTTTGAAGCCTCGG
TAATGTGGCTGCACAAGAGGATTGTCCACCTGCCGTCTCAACGGGATCTG
TATGCGAAATACTTTCCCACGGCCAGGAAATCATTGGATGAAGTTTTGGA
CAGCTTTGCGCTAATGCTTCTCGGCCAGCACTTTTCCCTGAGCTATCCAC
GCCCCTATTTGCCCAATATGATCGAGGT
BO07048.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:54:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6644-PA | 1614 | Ugt35a-RA | 1..812 | 17..828 | 4060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:14:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35a-RA | 1781 | CG6644-RA | 41..852 | 17..828 | 4060 | 100 | Plus |
Ugt86Dd-RB | 1671 | CG6633-RB | 700..793 | 735..828 | 200 | 80.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:14:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11171746..11172284 | 828..290 | 2695 | 100 | Minus |
3R | 32079331 | 3R | 11172351..11172624 | 290..17 | 1370 | 100 | Minus |
3R | 32079331 | 3R | 11127475..11127568 | 828..735 | 200 | 80.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:14:05 has no hits.
BO07048.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:07:40 Download gff for
BO07048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6644-PA | 1..812 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:11 Download gff for
BO07048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6644-PA | 1..812 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:03:56 Download gff for
BO07048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35a-RA | 41..852 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:24:59 Download gff for
BO07048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35a-RA | 41..852 | 17..828 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:24:59 Download gff for
BO07048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11171746..11172283 | 291..828 | 100 | <- | Minus |
3R | 11172351..11172624 | 17..290 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:03:56 Download gff for
BO07048.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6997468..6998005 | 291..828 | 100 | <- | Minus |
arm_3R | 6998073..6998346 | 17..290 | 100 | | Minus |
BO07048.complete Sequence
1645 bp (1645 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630639
> BO07048.complete
GAAGTTATCAGTCGACATGGGTGGAATATTTTCTGTAACTGGTCTTGGCA
TTCTGCTAATTGGCCTGATATGGCTGTTCGCCGCAAATGCCGATGAAGGG
GTTCAAAGTTCGCGCATATTGGCCGTGTTTCCTTTTCCCGGCCGATCGCA
GTACATTTTCGCTGAGCAGTTTATGAAGGAACTGGCCCATCGGGGTCACA
ATGTCACCGTAATCAATACCTTTGGTAGCGATAAAAACGAGCCCAACTTT
CGGGTGATTGGTGCTAAAAAAATTCACGAAATAATGGCGGCATTTGGAAA
TGCAGATTACACCCAAACGGCGAGTCAATGGCAAATGTTGACTATGACCA
CACAGTTTCTCAATCTTTTGACCACAAGTATCCTGGATGATGCGGCTGTA
AAGGATTTACTGAACAGCGGCGAGAAATTCGATTTGGTTATAATGGAAGC
GGTGCAAACCGAAGCCCTCTTCGGTTTGATCCAGCATTTTGGAGCAGAAA
CCATAGGTATCTCATCGTACGGCACAGATACACACATCGATGAGTTAATG
GGCAACATATCGCCATTGTCCTACAATCCCTTGCTACTCTCATCGCGAAC
GGAGCAAATGGATTTCAAGGATCGTGTGATGAATGTGTTTGAAGCCTCGG
TAATGTGGCTGCACAAGAGGATTGTCCACCTGCCGTCTCAACGGGATCTG
TATGCGAAATACTTTCCCACGGCCAGGAAATCATTGGATGAAGTTTTGGA
CAGCTTTGCGCTAATGCTTCTCGGCCAGCACTTTTCCCTGAGCTATCCAC
GCCCCTATTTGCCCAATATGATCGAGGTGGGCGGACTGCATTTACAACAG
AAGCGAAAGGTTCAGCCCTTAGCAAAGGAACTGTCGGAATTTGTCGAGCA
ATCGGAGAAGGGAGTAATCTATTTCTCCATGGGTTCCAATATCAAAAGCA
AAGACTTGCCGCCATCCACACGAAAAATGCTAATGCAAACCTTTGCCAGT
GTGCCACAACGTGTGCTGTGGAAATTCGAGGATGATCAGTTGCCCGAAAA
ACCCGATAATGTCTTCATCAGCAAGTGGTTCCCCCAACCCGATATTCTCG
CTCATCCGAATGTTAAGCTCTTCATCACCCACGGAGGTCTATTGAGCACC
ATCGAGAGTATATACTTTGGAAAGCCCATACTTGGATTGCCCATTTTCTA
TGATCAGCACTTGAATGTTCAGAGGGCCAAGCAGGTAGGCTATGGTCTCA
GTGCTGATATATGGAGTGTCAATGCGACAGAACTGACGCCTTTGATCCAG
GAATTGCTGAGTAATCCCAGTTATGCGGCAGCAGCTCAGACTAAATCCAA
ATTATTCCGAGATCAGAAGGAAACCGCTTTGGAGCGCGCCATTTGGTGGA
CCGAGTACGTATTGCGGCATAAGGGAGCCAAACACTTGAGATGTGCTTCG
CGTGATCTGGATTTTATTCAGTTCCACGGACTGGACACCTGGGGGCTCCT
CATCGCAATCACTTTTGTCTCCCTACTGATCGTCGTTATTTTGATTAAAT
GCTTACAAAGGGTCTTCGTTTCGCTTATAAGTAAAATCCGAAAAAATCGT
GCGGAGGCGAGTAAATTGAAGACCCAGGCAAGCTTTCTAGACCAT
BO07048.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:03:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35a-RA | 1614 | CG6644-PA | 1..1611 | 17..1627 | 8055 | 100 | Plus |
Ugt86Dd-RB | 1553 | CG6633-PB | 957..1176 | 1013..1232 | 395 | 78.6 | Plus |
Ugt35b-RA | 1551 | CG6649-PA | 941..1112 | 987..1158 | 335 | 79.7 | Plus |
Ugt86Dd-RB | 1553 | CG6633-PB | 685..790 | 735..840 | 215 | 80.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35a-RA | 1781 | CG6644-RA | 41..1651 | 17..1627 | 8055 | 100 | Plus |
Ugt86Dd-RB | 1671 | CG6633-RB | 972..1191 | 1013..1232 | 395 | 78.6 | Plus |
Ugt35b-RA | 1672 | CG6649-RA | 977..1148 | 987..1158 | 335 | 79.7 | Plus |
Ugt86Dd-RB | 1671 | CG6633-RB | 700..805 | 735..840 | 215 | 80.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11170947..11172284 | 1627..290 | 6690 | 100 | Minus |
3R | 32079331 | 3R | 11172351..11172624 | 290..17 | 1370 | 100 | Minus |
3R | 32079331 | 3R | 11127077..11127296 | 1232..1013 | 395 | 78.6 | Minus |
3R | 32079331 | 3R | 11169027..11169198 | 1158..987 | 335 | 79.7 | Minus |
3R | 32079331 | 3R | 31394055..31394228 | 1192..1019 | 270 | 77 | Minus |
3R | 32079331 | 3R | 11164850..11165060 | 1200..990 | 245 | 74.4 | Minus |
3R | 32079331 | 3R | 11127463..11127568 | 840..735 | 215 | 80.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:03:36 has no hits.
BO07048.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:39 Download gff for
BO07048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35a-RA | 1..1614 | 17..1631 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:41:13 Download gff for
BO07048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35a-RA | 41..1654 | 17..1631 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:37:48 Download gff for
BO07048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35a-RA | 41..1651 | 17..1629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:39 Download gff for
BO07048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35a-RA | 41..1654 | 17..1631 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:28 Download gff for
BO07048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt35a-RA | 41..1651 | 17..1629 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:28 Download gff for
BO07048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11170945..11172283 | 291..1629 | 99 | <- | Minus |
3R | 11172351..11172624 | 17..290 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:37:48 Download gff for
BO07048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6996667..6998005 | 291..1629 | 99 | <- | Minus |
arm_3R | 6998073..6998346 | 17..290 | 100 | | Minus |
BO07048.pep Sequence
Translation from 16 to 1645
> BO07048.pep
MGGIFSVTGLGILLIGLIWLFAANADEGVQSSRILAVFPFPGRSQYIFAE
QFMKELAHRGHNVTVINTFGSDKNEPNFRVIGAKKIHEIMAAFGNADYTQ
TASQWQMLTMTTQFLNLLTTSILDDAAVKDLLNSGEKFDLVIMEAVQTEA
LFGLIQHFGAETIGISSYGTDTHIDELMGNISPLSYNPLLLSSRTEQMDF
KDRVMNVFEASVMWLHKRIVHLPSQRDLYAKYFPTARKSLDEVLDSFALM
LLGQHFSLSYPRPYLPNMIEVGGLHLQQKRKVQPLAKELSEFVEQSEKGV
IYFSMGSNIKSKDLPPSTRKMLMQTFASVPQRVLWKFEDDQLPEKPDNVF
ISKWFPQPDILAHPNVKLFITHGGLLSTIESIYFGKPILGLPIFYDQHLN
VQRAKQVGYGLSADIWSVNATELTPLIQELLSNPSYAAAAQTKSKLFRDQ
KETALERAIWWTEYVLRHKGAKHLRCASRDLDFIQFHGLDTWGLLIAITF
VSLLIVVILIKCLQRVFVSLISKIRKNRAEASKLKTQASFLDH
BO07048.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt35a-PA | 537 | CG6644-PA | 1..537 | 1..537 | 2760 | 100 | Plus |
Ugt86Dd-PB | 517 | CG6633-PB | 22..496 | 30..509 | 1422 | 56.2 | Plus |
Ugt35b-PA | 516 | CG6649-PA | 17..503 | 29..516 | 1250 | 51.5 | Plus |
CG31002-PA | 521 | CG31002-PA | 16..506 | 30..513 | 1052 | 44.6 | Plus |
Ugt86Da-PA | 528 | CG18578-PA | 22..526 | 29..530 | 1013 | 43 | Plus |