Clone BO07048 Report

Search the DGRC for BO07048

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:70
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptUgt35a-RA
Protein status:BO07048.pep: validated full length
Sequenced Size:1645

Clone Sequence Records

BO07048.3prime Sequence

892 bp (832 high quality bases) assembled on 2005-12-03

> BO07048.3prime
ATGGTCTAGAAAGCTTGCCTGGGTCTTCAATTTACTCGCCTCCGCACGAT
TTTTTCGGATTTTACTTATAAGCGAAACGAAGACCCTTTGTAAGCATTTA
ATCAAAATAACGACGATCAGTAGGGAGACAAAAGTGATTGCGATGAGGAG
CCCCCAGGTGTCCAGTCCGTGGAACTGAATAAAATCCAGATCACGCGAAG
CACATCTCAAGTGTTTGGCTCCCTTATGCCGCAATACGTACTCGGTCCAC
CAAATGGCGCGCTCCAAAGCGGTTTCCTTCTGATCTCGGAATAATTTGGA
TTTAGTCTGAGCTGCTGCCGCATAACTGGGATTACTCAGCAATTCCTGGA
TCAAAGGCGTCAGTTCTGTCGCATTGACACTCCATATATCAGCACTGAGA
CCATAGCCTACCTGCTTGGCCCTCTGAACATTCAAGTGCTGATCATAGAA
AATGGGCAATCCAAGTATGGGCTTTCCAAAGTATATACTCTCGATGGTGC
TCAATAGACCTCCGTGGGTGATGAAGAGCTTAACATTCGGATGAGCGAGA
ATATCGGGTTGGGGGAACCACTTGCTGATGAAGACATTATCGGGTTTTTC
GGGCAACTGATCATCCTCGAATTTCCACAGCACACGTTGTGGCACACTGG
CAAAGGTTTGCATTAGCATTTTTCGTGTGGATGGCGGCAAGTCTTTGCTT
TTGATATTGGAACCCATGGAGAAATAGATTACTCCCTTCTCCGATTGCTC
GACAAATTCCGACAGTTCCTTTGCTAAGGGCTGAACCTTTCGCTTCTGTT
GTAAATGCAGTCCGCCCACCTCGATCATATTGGGCAAATAGGGGCGTGGA
TAGCTCAGGGAAAAGTGCTGGCCGAGAAGCATTAGCGCAAAG

BO07048.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:54:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG6644-PA 1614 Ugt35a-RA 738..1611 892..19 4370 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-RA 1781 CG6644-RA 778..1651 892..19 4370 100 Minus
Ugt86Dd-RB 1671 CG6633-RB 972..1191 633..414 395 78.6 Minus
Ugt35b-RA 1672 CG6649-RA 977..1148 659..488 335 79.7 Minus
Ugt86Dd-RB 1671 CG6633-RB 738..805 873..806 190 85.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11170947..11171820 19..892 4370 100 Plus
3R 32079331 3R 11127077..11127296 414..633 395 78.6 Plus
3R 32079331 3R 11169027..11169198 488..659 335 79.7 Plus
3R 32079331 3R 31394055..31394228 454..627 270 77 Plus
3R 32079331 3R 11164850..11165060 446..656 245 74.4 Plus
3R 32079331 3R 11127463..11127530 806..873 190 85.3 Plus
Blast to na_te.dros performed on 2015-02-13 01:32:21 has no hits.

BO07048.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:07:39 Download gff for BO07048.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6644-PA 738..1614 15..892 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:10 Download gff for BO07048.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6644-PA 738..1614 15..892 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:31:11 Download gff for BO07048.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 778..1654 15..892 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:06:37 Download gff for BO07048.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 778..1654 15..892 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:06:37 Download gff for BO07048.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11170944..11171820 15..892 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:31:11 Download gff for BO07048.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6996666..6997542 15..892 99   Plus

BO07048.5prime Sequence

828 bp (724 high quality bases) assembled on 2005-12-03

> BO07048.5prime
GAAGTTATCAGTCGACATGGGTGGAATATTTTCTGTAACTGGTCTTGGCA
TTCTGCTAATTGGCCTGATATGGCTGTTCGCCGCAAATGCCGATGAAGGG
GTTCAAAGTTCGCGCATATTGGCCGTGTTTCCTTTTCCCGGCCGATCGCA
GTACATTTTCGCTGAGCAGTTTATGAAGGAACTGGCCCATCGGGGTCACA
ATGTCACCGTAATCAATACCTTTGGTAGCGATAAAAACGAGCCCAACTTT
CGGGTGATTGGTGCTAAAAAAATTCACGAAATAATGGCGGCATTTGGAAA
TGCAGATTACACCCAAACGGCGAGTCAATGGCAAATGTTGACTATGACCA
CACAGTTTCTCAATCTTTTGACCACAAGTATCCTGGATGATGCGGCTGTA
AAGGATTTACTGAACAGCGGCGAGAAATTCGATTTGGTTATAATGGAAGC
GGTGCAAACCGAAGCCCTCTTCGGTTTGATCCAGCATTTTGGAGCAGAAA
CCATAGGTATCTCATCGTACGGCACAGATACACACATCGATGAGTTAATG
GGCAACATATCGCCATTGTCCTACAATCCCTTGCTACTCTCATCGCGAAC
GGAGCAAATGGATTTCAAGGATCGTGTGATGAATGTGTTTGAAGCCTCGG
TAATGTGGCTGCACAAGAGGATTGTCCACCTGCCGTCTCAACGGGATCTG
TATGCGAAATACTTTCCCACGGCCAGGAAATCATTGGATGAAGTTTTGGA
CAGCTTTGCGCTAATGCTTCTCGGCCAGCACTTTTCCCTGAGCTATCCAC
GCCCCTATTTGCCCAATATGATCGAGGT

BO07048.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:54:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG6644-PA 1614 Ugt35a-RA 1..812 17..828 4060 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:14:10
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-RA 1781 CG6644-RA 41..852 17..828 4060 100 Plus
Ugt86Dd-RB 1671 CG6633-RB 700..793 735..828 200 80.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:14:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11171746..11172284 828..290 2695 100 Minus
3R 32079331 3R 11172351..11172624 290..17 1370 100 Minus
3R 32079331 3R 11127475..11127568 828..735 200 80.9 Minus
Blast to na_te.dros performed on 2015-02-10 17:14:05 has no hits.

BO07048.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:07:40 Download gff for BO07048.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6644-PA 1..812 17..828 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:11 Download gff for BO07048.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6644-PA 1..812 17..828 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:03:56 Download gff for BO07048.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..852 17..828 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:24:59 Download gff for BO07048.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..852 17..828 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:24:59 Download gff for BO07048.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11171746..11172283 291..828 100 <- Minus
3R 11172351..11172624 17..290 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:03:56 Download gff for BO07048.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6997468..6998005 291..828 100 <- Minus
arm_3R 6998073..6998346 17..290 100   Minus

BO07048.complete Sequence

1645 bp (1645 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630639

> BO07048.complete
GAAGTTATCAGTCGACATGGGTGGAATATTTTCTGTAACTGGTCTTGGCA
TTCTGCTAATTGGCCTGATATGGCTGTTCGCCGCAAATGCCGATGAAGGG
GTTCAAAGTTCGCGCATATTGGCCGTGTTTCCTTTTCCCGGCCGATCGCA
GTACATTTTCGCTGAGCAGTTTATGAAGGAACTGGCCCATCGGGGTCACA
ATGTCACCGTAATCAATACCTTTGGTAGCGATAAAAACGAGCCCAACTTT
CGGGTGATTGGTGCTAAAAAAATTCACGAAATAATGGCGGCATTTGGAAA
TGCAGATTACACCCAAACGGCGAGTCAATGGCAAATGTTGACTATGACCA
CACAGTTTCTCAATCTTTTGACCACAAGTATCCTGGATGATGCGGCTGTA
AAGGATTTACTGAACAGCGGCGAGAAATTCGATTTGGTTATAATGGAAGC
GGTGCAAACCGAAGCCCTCTTCGGTTTGATCCAGCATTTTGGAGCAGAAA
CCATAGGTATCTCATCGTACGGCACAGATACACACATCGATGAGTTAATG
GGCAACATATCGCCATTGTCCTACAATCCCTTGCTACTCTCATCGCGAAC
GGAGCAAATGGATTTCAAGGATCGTGTGATGAATGTGTTTGAAGCCTCGG
TAATGTGGCTGCACAAGAGGATTGTCCACCTGCCGTCTCAACGGGATCTG
TATGCGAAATACTTTCCCACGGCCAGGAAATCATTGGATGAAGTTTTGGA
CAGCTTTGCGCTAATGCTTCTCGGCCAGCACTTTTCCCTGAGCTATCCAC
GCCCCTATTTGCCCAATATGATCGAGGTGGGCGGACTGCATTTACAACAG
AAGCGAAAGGTTCAGCCCTTAGCAAAGGAACTGTCGGAATTTGTCGAGCA
ATCGGAGAAGGGAGTAATCTATTTCTCCATGGGTTCCAATATCAAAAGCA
AAGACTTGCCGCCATCCACACGAAAAATGCTAATGCAAACCTTTGCCAGT
GTGCCACAACGTGTGCTGTGGAAATTCGAGGATGATCAGTTGCCCGAAAA
ACCCGATAATGTCTTCATCAGCAAGTGGTTCCCCCAACCCGATATTCTCG
CTCATCCGAATGTTAAGCTCTTCATCACCCACGGAGGTCTATTGAGCACC
ATCGAGAGTATATACTTTGGAAAGCCCATACTTGGATTGCCCATTTTCTA
TGATCAGCACTTGAATGTTCAGAGGGCCAAGCAGGTAGGCTATGGTCTCA
GTGCTGATATATGGAGTGTCAATGCGACAGAACTGACGCCTTTGATCCAG
GAATTGCTGAGTAATCCCAGTTATGCGGCAGCAGCTCAGACTAAATCCAA
ATTATTCCGAGATCAGAAGGAAACCGCTTTGGAGCGCGCCATTTGGTGGA
CCGAGTACGTATTGCGGCATAAGGGAGCCAAACACTTGAGATGTGCTTCG
CGTGATCTGGATTTTATTCAGTTCCACGGACTGGACACCTGGGGGCTCCT
CATCGCAATCACTTTTGTCTCCCTACTGATCGTCGTTATTTTGATTAAAT
GCTTACAAAGGGTCTTCGTTTCGCTTATAAGTAAAATCCGAAAAAATCGT
GCGGAGGCGAGTAAATTGAAGACCCAGGCAAGCTTTCTAGACCAT

BO07048.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-RA 1614 CG6644-PA 1..1611 17..1627 8055 100 Plus
Ugt86Dd-RB 1553 CG6633-PB 957..1176 1013..1232 395 78.6 Plus
Ugt35b-RA 1551 CG6649-PA 941..1112 987..1158 335 79.7 Plus
Ugt86Dd-RB 1553 CG6633-PB 685..790 735..840 215 80.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-RA 1781 CG6644-RA 41..1651 17..1627 8055 100 Plus
Ugt86Dd-RB 1671 CG6633-RB 972..1191 1013..1232 395 78.6 Plus
Ugt35b-RA 1672 CG6649-RA 977..1148 987..1158 335 79.7 Plus
Ugt86Dd-RB 1671 CG6633-RB 700..805 735..840 215 80.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11170947..11172284 1627..290 6690 100 Minus
3R 32079331 3R 11172351..11172624 290..17 1370 100 Minus
3R 32079331 3R 11127077..11127296 1232..1013 395 78.6 Minus
3R 32079331 3R 11169027..11169198 1158..987 335 79.7 Minus
3R 32079331 3R 31394055..31394228 1192..1019 270 77 Minus
3R 32079331 3R 11164850..11165060 1200..990 245 74.4 Minus
3R 32079331 3R 11127463..11127568 840..735 215 80.2 Minus
Blast to na_te.dros performed on 2014-11-28 01:03:36 has no hits.

BO07048.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:39 Download gff for BO07048.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 1..1614 17..1631 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:41:13 Download gff for BO07048.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..1654 17..1631 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:37:48 Download gff for BO07048.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..1651 17..1629 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:39 Download gff for BO07048.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..1654 17..1631 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:28 Download gff for BO07048.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..1651 17..1629 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:28 Download gff for BO07048.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11170945..11172283 291..1629 99 <- Minus
3R 11172351..11172624 17..290 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:37:48 Download gff for BO07048.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6996667..6998005 291..1629 99 <- Minus
arm_3R 6998073..6998346 17..290 100   Minus

BO07048.pep Sequence

Translation from 16 to 1645

> BO07048.pep
MGGIFSVTGLGILLIGLIWLFAANADEGVQSSRILAVFPFPGRSQYIFAE
QFMKELAHRGHNVTVINTFGSDKNEPNFRVIGAKKIHEIMAAFGNADYTQ
TASQWQMLTMTTQFLNLLTTSILDDAAVKDLLNSGEKFDLVIMEAVQTEA
LFGLIQHFGAETIGISSYGTDTHIDELMGNISPLSYNPLLLSSRTEQMDF
KDRVMNVFEASVMWLHKRIVHLPSQRDLYAKYFPTARKSLDEVLDSFALM
LLGQHFSLSYPRPYLPNMIEVGGLHLQQKRKVQPLAKELSEFVEQSEKGV
IYFSMGSNIKSKDLPPSTRKMLMQTFASVPQRVLWKFEDDQLPEKPDNVF
ISKWFPQPDILAHPNVKLFITHGGLLSTIESIYFGKPILGLPIFYDQHLN
VQRAKQVGYGLSADIWSVNATELTPLIQELLSNPSYAAAAQTKSKLFRDQ
KETALERAIWWTEYVLRHKGAKHLRCASRDLDFIQFHGLDTWGLLIAITF
VSLLIVVILIKCLQRVFVSLISKIRKNRAEASKLKTQASFLDH

BO07048.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:17
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-PA 537 CG6644-PA 1..537 1..537 2760 100 Plus
Ugt86Dd-PB 517 CG6633-PB 22..496 30..509 1422 56.2 Plus
Ugt35b-PA 516 CG6649-PA 17..503 29..516 1250 51.5 Plus
CG31002-PA 521 CG31002-PA 16..506 30..513 1052 44.6 Plus
Ugt86Da-PA 528 CG18578-PA 22..526 29..530 1013 43 Plus