Clone Sequence Records
BO07058.3prime Sequence
881 bp (744 high quality bases) assembled on 2005-12-03
> BO07058.3prime
ATGGTCTAGAAAGCTTGAGTGGCTGCCGCCGTTGGTGGTGCCATTGGCCT
TGGGCTTCTGCTTGCCGGCGGCAATGAAAGTGGTCACGTCCAGCTTGGTG
GCCAGAGCTTTGAGCTCCACCTTGCCGGCCGGGTTCTTGCCCAGGATGAG
CACGCTGGGGTCCACTTCGAGGACGCGGGCCAACTTGCCCAGAATCTCGG
ATTCGTTCAGTCGGATTACTCGTTTGTTGAGCGCCTTGATTGCGGGATCG
GACTGCTGGCGGTTCATGCTCACGATCTGCGTGATCAGCGTCTCCTGACC
CACGACGCCCAGGACAGAACCATCATCCTGATCCACGACGGGCAGCTGGT
CCACGCGGTGTTTCTTCATCAGGGCAATAGCCTCACCAACAGTTGCATCC
GACTTGAGAATGACCGGGGGAGCGGGTAGCTCCAACTCCGCGATGGCCAG
GCTCCACCACCAGTGACCGTGCTCGTTTACCGGCTCCTTGAAGTTGCGCG
CCTCCATCCAGTTGTCCGACACGAACTTGGTCATGTAGTTGCGTATGCCA
TCGGGCAGAATGACCACGCACCGCTGGCCTTTCTTCAATTTGCGGGCATG
CTCGAGGGCAGCGTGCATCGCTCCGCCACTGGACCCGCCGCACAACAGAC
CCTCCTCCGCGTTCAGGCGTCTGCTCATGGGGAAACAGTCTGAGTCGCCG
ATTTTCGTCCACACATCCACGACGGTGTCATCGAATACGGTGGGCGGAAA
GTCGTAGCCGATGCCCTCCACCTCGTAGAATTGCACATCGGTCTTGTTGA
GCTCAGCAGGGCGGGCAAGGATCGAGCCATANGGATCCACGCCGACTATC
TGGCAACTGGGAACCTGCTCCTTGATCTTAC
BO07058.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:54:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1753-PA | 1569 | CG1753-RA | 704..1567 | 881..18 | 4301 | 99.8 | Minus |
CG1753-PB | 1569 | CG1753-RB | 704..1567 | 881..18 | 4301 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:15:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-RC | 1788 | CG1753-RC | 795..1658 | 881..18 | 4309 | 99.9 | Minus |
Cbs-RB | 1990 | CG1753-RB | 997..1860 | 881..18 | 4309 | 99.9 | Minus |
Cbs-RA | 1911 | CG1753-RA | 918..1781 | 881..18 | 4309 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:15:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21048037..21048598 | 881..320 | 2799 | 99.8 | Minus |
X | 23542271 | X | 21048664..21048966 | 320..18 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 16:15:53 has no hits.
BO07058.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:07:57 Download gff for
BO07058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-PB | 704..1569 | 15..881 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:32 Download gff for
BO07058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-PB | 704..1569 | 15..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:10:10 Download gff for
BO07058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 918..1786 | 12..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:26:22 Download gff for
BO07058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 918..1786 | 12..881 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:26:22 Download gff for
BO07058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21048037..21048598 | 320..881 | 99 | -> | Minus |
X | 21048665..21048971 | 12..319 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:10:10 Download gff for
BO07058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20919064..20919625 | 320..881 | 99 | -> | Minus |
arm_X | 20919692..20919998 | 12..319 | 99 | | Minus |
BO07058.5prime Sequence
889 bp (847 high quality bases) assembled on 2005-12-03
> BO07058.5prime
GAAGTTATCAGTCGACATGCCACAACCGAAGCCATACGAGAGGCCCGCGG
ACTTCATCGATCCCGGCAAGCCGTCCAAGTGCAAATGGCATCTGGGTACA
GCCGAGAAGTCGCCCCACATCCATCGGGGCATCGCCCACCGCCAGCAGAT
TACGCCCAACATCCTCGAGGTGATCGGATGCACGCCACTGGTCAAGTTGA
ACAACATTCCCGCCAGCGACGGCATCGAATGCGAGATGTATGCCAAGTGC
GAGTTCCTTAATCCGGGTGGATCAGTGAAGGACCGCATTGGGTACCGCAT
GGTGCAGGACGCCGAGGAGCAGGGCCTGCTCAAGCCAGGCTACACCATCA
TCGAACCAACGTCTGGAAACACGGGCATTGGACTGGCAATGGCCTGTGCC
GTTAAGGGATACAAGTGCATTATCGTGATGCCGGAGAAGATGTCCAACGA
GAAGGTGTCCGCGCTGCGAACCCTCGGGGCCAAGATCATACGTACTCCAA
CGGAGGCAGCCTACGATTCGCCGGAGGGACTGATCTACGTTGCTCAGCAG
CTGCAGCGGGAAACGCCCAACTCGATTGTCTTGGATCAGTATCGCAACGC
TGGCAATCCGCTGGCTCACTACGATGGCACTGCCGCCGAGATTCTGTGGC
AGCTGGACAACAAGGTCGATATGATAGTGGTCTCGGCGGGAACGGCGGGA
ACTATCAGTGGTATTGGGCGTAAGATCAAGGAGCAGGTTCCCAGTTGCCA
GATAGTCGGCGTGGATCCCTATGGCTCGATCCTTGCCCGCCCTGCTGAGC
TCAACAAGACCGATGTGCAATTCTACGAGGTGGAGGGCATCGGCTACGAC
TTTCCGCCCACCGTATTCGATGACACCGTCGTGGATGTG
BO07058.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:54:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1753-PA | 1569 | CG1753-RA | 1..873 | 17..889 | 4365 | 100 | Plus |
CG1753-PB | 1569 | CG1753-RB | 1..873 | 17..889 | 4365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:16:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-RC | 1788 | CG1753-RC | 92..964 | 17..889 | 4365 | 100 | Plus |
Cbs-RB | 1990 | CG1753-RB | 294..1166 | 17..889 | 4365 | 100 | Plus |
Cbs-RA | 1911 | CG1753-RA | 215..1087 | 17..889 | 4365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:16:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21047557..21048206 | 240..889 | 3250 | 100 | Plus |
X | 23542271 | X | 21047190..21047412 | 17..239 | 1115 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 20:16:47 has no hits.
BO07058.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:07:58 Download gff for
BO07058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-PB | 1..873 | 17..889 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:33 Download gff for
BO07058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-PB | 1..873 | 17..889 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:23:58 Download gff for
BO07058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 208..1087 | 9..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:47:25 Download gff for
BO07058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 208..1087 | 9..889 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:47:25 Download gff for
BO07058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21047180..21047412 | 8..239 | 98 | -> | Plus |
X | 21047557..21048206 | 240..889 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:23:58 Download gff for
BO07058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20918207..20918439 | 8..239 | 98 | -> | Plus |
arm_X | 20918584..20919233 | 240..889 | 100 | | Plus |
BO07058.complete Sequence
1600 bp assembled on 2008-08-15
> BO07058.complete
GAAGTTATCAGTCGACATGCCACAACCGAAGCCATACGAGAGGCCCGCGG
ACTTCATCGATCCCGGCAAGCCGTCCAAGTGCAAATGGCATCTGGGTACA
GCCGAGAAGTCGCCCCACATCCATCGGGGCATCGCCCACCGCCAGCAGAT
TACGCCCAACATCCTCGAGGTGATCGGATGCACGCCACTGGTCAAGTTGA
ACAACATTCCCGCCAGCGACGGCATCGAATGCGAGATGTATGCCAAGTGC
GAGTTCCTTAATCCGGGTGGATCAGTGAAGGACCGCATTGGGTACCGCAT
GGTGCAGGACGCCGAGGAGCAGGGCCTGCTCAAGCCAGGCTACACCATCA
TCGAACCAACGTCTGGAAACACGGGCATTGGACTGGCAATGGCCTGTGCC
GTTAAGGGATACAAGTGCATTATCGTGATGCCGGAGAAGATGTCCAACGA
GAAGGTGTCCGCGCTGCGAACCCTCGGGGCCAAGATCATACGTACTCCAA
CGGAGGCAGCCTACGATTCGCCGGAGGGACTGATCTACGTTGCTCAGCAG
CTGCAGCGGGAAACGCCCAACTCGATTGTCTTGGATCAGTATCGCAACGC
TGGCAATCCGCTGGCTCACTACGATGGCACTGCCGCCGAGATTCTGTGGC
AGCTGGACAACAAGGTCGATATGATAGTGGTCTCGGCGGGAACGGCGGGA
ACTATCAGTGGTATTGGGCGTAAGATCAAGGAGCAGGTTCCCAGTTGCCA
GATAGTCGGCGTGGATCCCTATGGCTCGATCCTTGCCCGCCCTGCTGAGC
TCAACAAGACCGATGTGCAATTCTACGAGGTGGAGGGCATCGGCTACGAC
TTTCCGCCCACCGTATTCGATGACACCGTCGTGGATGTGTGGACGAAAAT
CGGCGACTCAGACTGTTTCCCCATGAGCAGACGCCTGAACGCGGAGGAGG
GTCTGTTGTGCGGCGGGTCCAGTGGCGGAGCGATGCACGCTGCCCTCGAG
CATGCCCGCAAATTGAAGAAAGGCCAGCGGTGCGTGGTCATTCTGCCCGA
TGGCATACGCAACTACATGACCAAGTTCGTGTCGGACAACTGGATGGAGG
CGCGCAACTTCAAGGAGCCGGTAAACGAGCACGGTCACTGGTGGTGGAGC
CTGGCCATCGCGGAGTTGGAGCTACCCGCTCCCCCGGTCATTCTCAAGTC
GGATGCAACTGTTGGTGAGGCTATTGCCCTGATGAAGAAACACCGCGTGG
ACCAGCTGCCCGTCGTGGATCAGGATGATGGTTCTGTCCTGGGCGTCGTG
GGTCAGGAGACGCTGATCACGCAGATCGTGAGCATGAACCGCCAGCAGTC
CGATCCCGCAATCAAGGCGCTCAACAAACGAGTAATCCGACTGAACGAAT
CCGAGATTCTGGGCAAGTTGGCCCGCGTCCTCGAAGTGGACCCCAGCGTG
CTCATCCTGGGCAAGAACCCGGCCGGCAAGGTGGAGCTCAAAGCTCTGGC
CACCAAGCTGGACGTGACCACTTTCATTGCCGCCGGCAAGCAGAAGCCCA
AGGCCAATGGCACCACCAACGGCGGCAGCCACTCAAGCTTTCTAGACCAT
BO07058.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:56:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-RC | 1569 | CG1753-PC | 1..1567 | 17..1583 | 7835 | 100 | Plus |
Cbs-RB | 1569 | CG1753-PB | 1..1567 | 17..1583 | 7835 | 100 | Plus |
Cbs-RA | 1569 | CG1753-PA | 1..1567 | 17..1583 | 7835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-RC | 1788 | CG1753-RC | 92..1658 | 17..1583 | 7835 | 100 | Plus |
Cbs-RB | 1990 | CG1753-RB | 294..1860 | 17..1583 | 7835 | 100 | Plus |
Cbs-RA | 1911 | CG1753-RA | 215..1781 | 17..1583 | 7835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21047557..21048598 | 240..1281 | 5210 | 100 | Plus |
X | 23542271 | X | 21048664..21048966 | 1281..1583 | 1515 | 100 | Plus |
X | 23542271 | X | 21047190..21047412 | 17..239 | 1115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:56:35 has no hits.
BO07058.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:47:17 Download gff for
BO07058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-RB | 285..1865 | 7..1589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:52 Download gff for
BO07058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 215..1781 | 17..1584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:01:45 Download gff for
BO07058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-RB | 294..1860 | 17..1584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:30 Download gff for
BO07058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 215..1781 | 17..1584 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:30 Download gff for
BO07058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21047190..21047412 | 17..239 | 100 | -> | Plus |
X | 21047557..21048598 | 240..1281 | 100 | -> | Plus |
X | 21048665..21048966 | 1282..1584 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:52 Download gff for
BO07058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20918217..20918439 | 17..239 | 100 | -> | Plus |
arm_X | 20918584..20919625 | 240..1281 | 100 | -> | Plus |
arm_X | 20919692..20919993 | 1282..1584 | 99 | | Plus |
BO07058.pep Sequence
Translation from 16 to 1600
> BO07058.pep
MPQPKPYERPADFIDPGKPSKCKWHLGTAEKSPHIHRGIAHRQQITPNIL
EVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAE
EQGLLKPGYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSAL
RTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLA
HYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVD
PYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDC
FPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLKKGQRCVVILPDGIRNY
MTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELELPAPPVILKSDATVG
EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIK
ALNKRVIRLNESEILGKLARVLEVDPSVLILGKNPAGKVELKALATKLDV
TTFIAAGKQKPKANGTTNGGSHSSFLDH
BO07058.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:31:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-PC | 522 | CG1753-PC | 1..522 | 1..522 | 2734 | 100 | Plus |
Cbs-PB | 522 | CG1753-PB | 1..522 | 1..522 | 2734 | 100 | Plus |
Cbs-PA | 522 | CG1753-PA | 1..522 | 1..522 | 2734 | 100 | Plus |