Clone BO07064 Report

Search the DGRC for BO07064

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:70
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCycK-RA
Protein status:BO07064.pep: validated full length
Sequenced Size:1234

Clone Sequence Records

BO07064.3prime Sequence

879 bp (784 high quality bases) assembled on 2005-12-03

> BO07064.3prime
ATGGTCTAGAAAGCTTGCGTAGCGCTGCTGCGATGGACGCCCACCGGCGT
TGTAGTATCCACTGGCTCCTGGAGGCAAGCTAGGCGGCATTGGTGGTGGT
GGTGCAGCGCTCCCGCTATAGTGTCCGACCACTGTCTGCTGGACTCCCCA
TCCGGAAGAGGGGTACGGCGGCATAGGCACTACCGGCGGGGGCGGCGGTG
GAGGAGCATGATAAATGTGGTACCCGGATGGCTGACCTGGTGGTGTTGGG
CCCTGTAACAGGTTCTGGGAGTCGCTAGGACCAATGATTGGCACGCCACT
GGCTAGGGATTTAATGCTCTGAATGTTGCTAACTTCCAGCACGCCACCGT
TGCCACATACGGGGGGCGGCGGCTGTTGTGGAACGGAAAGTGGTCCAATA
CCCGTAGAATTGGTAAGCTTGCCGGATTTTGGACTGTCGGCTCTGCTTGG
TGGCTTTTGGGGCGGACTGGTTGGCTGGAGCGCTTCTTTTTGGGTTGATT
GGTACAGGTCCAGAACTTGGTGGCAGATGTCTTCGAGTATTTCCATCGTT
ACATCAGACACAAACATATCCCACCAACGCTGCTGCTGTGGCTGGCGGCC
CTCCCAGTCTTGCACAGTGAATTTGCTTAGCTTGCTGGCCAAATGGATAA
GAGCCACGGCGATAATCTCCGGCTCCCACTGTAGACAAACTACTGTGCTG
AGAGAGTCGTTGACGAAGTTCCACGCCATTTGCACCATCTTTTGCAGCTT
CTGCTGGTCGCCTTTGAAACACTTAGCGTACTTTAGGAGAAAGGTGTAAG
GATGCTCTACTTGCAAATCGAATTTGATGGTCTGCAGCAGAATACGCTCT
AGCGTCATCACCTCCTCCTTAGGGTCGTC

BO07064.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15218-PA 1203 CycK-RA 340..1200 879..19 4305 100 Minus
CG15218-PB 1203 CycK-RB 340..1200 879..19 4305 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:16:04
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-RC 5858 CG15218-RC 759..1619 879..19 4305 100 Minus
CycK-RB 1679 CG15218-RB 559..1419 879..19 4305 100 Minus
CycK-RA 1879 CG15218-RA 759..1619 879..19 4305 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:16:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22128524..22129384 19..879 4305 100 Plus
Blast to na_te.dros performed on 2015-02-13 16:16:03 has no hits.

BO07064.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:10 Download gff for BO07064.3prime
Subject Subject Range Query Range Percent Splice Strand
CycK-PA 340..1203 18..879 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:50 Download gff for BO07064.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15218-PB 340..1203 18..879 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:10:13 Download gff for BO07064.3prime
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 759..1619 19..879 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:26:59 Download gff for BO07064.3prime
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 759..1619 19..879 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:26:59 Download gff for BO07064.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 22128524..22129384 19..879 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:10:13 Download gff for BO07064.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22128524..22129384 19..879 100   Plus

BO07064.5prime Sequence

884 bp (775 high quality bases) assembled on 2005-12-03

> BO07064.5prime
GAAGTTATCAGTCGACATGCCGTGCTGGTATTACGACAAAAAGGAGCTGC
GGGAGACGCCCTCGATCTTGGATGGAATAAGCTTCGAAACGGAGCGGCGG
TACAGAAAAGAAGGTGCTCGATTTATTATGGAATGTGGCACCAAAATGGG
CTTGGGCCACAACACGATGGCCACCGGCGTTGTATATTTTCACCGATTTT
ACATGTTTCATTCGTTCCGGAGTTTCCCCCGGTACGTGACTGCGTGCTGC
TGCCTGTTCTTTGCTGGCAAGGTGGAGGAGACGCCAAAGAAGTGTCGCGA
CATTATTAAAACTGCGCGTGGCATCCTTACCGACAATTACTTCTACTCGT
TTGGCGACGACCCTAAGGAGGAGGTGATGACGCTAGAGCGTATTCTGCTG
CAGACCATCAAATTCGATTTGCAAGTAGAGCATCCTTACACCTTTCTCCT
AAAGTACGCTAAGTGTTTCAAAGGCGACCAGCAGAAGCTGCAAAAGATGG
TGCAAATGGCGTGGAACTTCGTCAACGACTCTCTCAGCACAGTAGTTTGT
CTACAGTGGGAGCCGGAGATTATCGCCGTGGCTCTTATCCATTTGGCCAG
CAAGCTAAGCAAATTCACTGTGCAAGACTGGGAGGGCCGCCAGCCACAGC
AGCAGCGTTGGTGGGATATGTTTGTGTCTGATGTAACGATGGAAATACTC
GAAGACATCTGCCACCAAGTTCTGGACCTGTACCAATCAACCCAAAAAGA
AGCGCTCCAGCCAACCAGTCCGCCCCAAAAGCCACCAAGCAGAGCCGACA
GTCCAAAATCCGGCAAGCTTACCAATTCTACGGGTATTGGACCACTTTTC
GTTCCACAACAGCCGCCGCCCCCCGTATGTGGCA

BO07064.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG15218-PA 1203 CycK-RA 1..868 17..884 4315 99.8 Plus
CG15218-PB 1203 CycK-RB 1..868 17..884 4315 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:33:40
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-RC 5858 CG15218-RC 420..1287 17..884 4325 99.9 Plus
CycK-RB 1679 CG15218-RB 220..1087 17..884 4325 99.9 Plus
CycK-RA 1879 CG15218-RA 420..1287 17..884 4325 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22128856..22129723 884..17 4325 99.9 Minus
2L 23513712 2L 22131022..22131126 263..159 345 88.6 Minus
Blast to na_te.dros performed on 2015-02-13 01:33:37 has no hits.

BO07064.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:11 Download gff for BO07064.5prime
Subject Subject Range Query Range Percent Splice Strand
CycK-PA 1..867 17..883 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:51 Download gff for BO07064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15218-PB 1..867 17..883 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:31:17 Download gff for BO07064.5prime
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 416..1286 13..883 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:10:34 Download gff for BO07064.5prime
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 416..1286 13..883 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:10:34 Download gff for BO07064.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 22128857..22129725 13..883 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:31:17 Download gff for BO07064.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22128857..22129725 13..883 99   Minus

BO07064.complete Sequence

1234 bp (1234 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630644

> BO07064.complete
GAAGTTATCAGTCGACATGCCGTGCTGGTATTACGACAAAAAGGAGCTGC
GGGAGACGCCCTCGATCTTGGATGGAATAAGCTTCGAAACGGAGCGGCGG
TACAGAAAAGAAGGTGCTCGATTTATTATGGAATGTGGCACCAAAATGGG
CTTGGGCCACAACACGATGGCCACCGGCGTTGTATATTTTCACCGATTTT
ACATGTTTCATTCGTTCCGGAGTTTCCCCCGGTACGTGACTGCGTGCTGC
TGCCTGTTCTTTGCTGGCAAGGTGGAGGAGACGCCAAAGAAGTGTCGCGA
CATTATTAAAACTGCGCGTGGCATCCTTACCGACAATTACTTCTACTCGT
TTGGCGACGACCCTAAGGAGGAGGTGATGACGCTAGAGCGTATTCTGCTG
CAGACCATCAAATTCGATTTGCAAGTAGAGCATCCTTACACCTTTCTCCT
AAAGTACGCTAAGTGTTTCAAAGGCGACCAGCAGAAGCTGCAAAAGATGG
TGCAAATGGCGTGGAACTTCGTCAACGACTCTCTCAGCACAGTAGTTTGT
CTACAGTGGGAGCCGGAGATTATCGCCGTGGCTCTTATCCATTTGGCCAG
CAAGCTAAGCAAATTCACTGTGCAAGACTGGGAGGGCCGCCAGCCACAGC
AGCAGCGTTGGTGGGATATGTTTGTGTCTGATGTAACGATGGAAATACTC
GAAGACATCTGCCACCAAGTTCTGGACCTGTACCAATCAACCCAAAAAGA
AGCGCTCCAGCCAACCAGTCCGCCCCAAAAGCCACCAAGCAGAGCCGACA
GTCCAAAATCCGGCAAGCTTACCAATTCTACGGGTATTGGACCACTTTCC
GTTCCACAACAGCCGCCGCCCCCCGTATGTGGCAACGGTGGCGTGCTGGA
AGTTAGCAACATTCAGAGCATTAAATCCCTAGCCAGTGGCGTGCCAATCA
TTGGTCCTAGCGACTCCCAGAACCTGTTACAGGGCCCAACACCACCAGGT
CAGCCATCCGGGTACCACATTTATCATGCTCCTCCACCGCCGCCCCCGCC
GGTAGTGCCTATGCCGCCGTACCCCTCTTCCGGATGGGGAGTCCAGCAGA
CAGTGGTCGGACACTATAGCGGGAGCGCTGCACCACCACCACCAATGCCG
CCTAGCTTGCCTCCAGGAGCCAGTGGATACTACAACGCCGGTGGGCGTCC
ATCGCAGCAGCGCTACGCAAGCTTTCTAGACCAT

BO07064.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:10:34
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-RC 1203 CG15218-PC 1..1200 17..1216 6000 100 Plus
CycK-RB 1203 CG15218-PB 1..1200 17..1216 6000 100 Plus
CycK-RA 1203 CG15218-PA 1..1200 17..1216 6000 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:10:36
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-RC 5858 CG15218-RC 420..1619 17..1216 6000 100 Plus
CycK-RB 1679 CG15218-RB 220..1419 17..1216 6000 100 Plus
CycK-RA 1879 CG15218-RA 420..1619 17..1216 6000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:10:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22128524..22129723 1216..17 6000 100 Minus
2L 23513712 2L 22131022..22131126 263..159 345 88.6 Minus
Blast to na_te.dros performed on 2014-11-27 20:10:34 has no hits.

BO07064.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:30 Download gff for BO07064.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RB 1..1203 17..1217 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:41:03 Download gff for BO07064.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RB 189..1392 13..1216 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:35 Download gff for BO07064.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 420..1619 17..1218 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:30 Download gff for BO07064.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RB 189..1392 13..1216 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:28 Download gff for BO07064.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 420..1619 17..1218 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:28 Download gff for BO07064.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22128522..22129723 17..1218 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:35 Download gff for BO07064.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22128522..22129723 17..1218 99   Minus

BO07064.pep Sequence

Translation from 16 to 1234

> BO07064.pep
MPCWYYDKKELRETPSILDGISFETERRYRKEGARFIMECGTKMGLGHNT
MATGVVYFHRFYMFHSFRSFPRYVTACCCLFFAGKVEETPKKCRDIIKTA
RGILTDNYFYSFGDDPKEEVMTLERILLQTIKFDLQVEHPYTFLLKYAKC
FKGDQQKLQKMVQMAWNFVNDSLSTVVCLQWEPEIIAVALIHLASKLSKF
TVQDWEGRQPQQQRWWDMFVSDVTMEILEDICHQVLDLYQSTQKEALQPT
SPPQKPPSRADSPKSGKLTNSTGIGPLSVPQQPPPPVCGNGGVLEVSNIQ
SIKSLASGVPIIGPSDSQNLLQGPTPPGQPSGYHIYHAPPPPPPPVVPMP
PYPSSGWGVQQTVVGHYSGSAAPPPPMPPSLPPGASGYYNAGGRPSQQRY
ASFLDH

BO07064.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:30
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-PC 400 CG15218-PC 1..400 1..400 2188 100 Plus
CycK-PB 400 CG15218-PB 1..400 1..400 2188 100 Plus
CycK-PA 400 CG15218-PA 1..400 1..400 2188 100 Plus
CycT-PC 1097 CG6292-PC 45..275 4..242 323 31.2 Plus
CycT-PB 1097 CG6292-PB 45..275 4..242 323 31.2 Plus