Clone Sequence Records
BO07064.3prime Sequence
879 bp (784 high quality bases) assembled on 2005-12-03
> BO07064.3prime
ATGGTCTAGAAAGCTTGCGTAGCGCTGCTGCGATGGACGCCCACCGGCGT
TGTAGTATCCACTGGCTCCTGGAGGCAAGCTAGGCGGCATTGGTGGTGGT
GGTGCAGCGCTCCCGCTATAGTGTCCGACCACTGTCTGCTGGACTCCCCA
TCCGGAAGAGGGGTACGGCGGCATAGGCACTACCGGCGGGGGCGGCGGTG
GAGGAGCATGATAAATGTGGTACCCGGATGGCTGACCTGGTGGTGTTGGG
CCCTGTAACAGGTTCTGGGAGTCGCTAGGACCAATGATTGGCACGCCACT
GGCTAGGGATTTAATGCTCTGAATGTTGCTAACTTCCAGCACGCCACCGT
TGCCACATACGGGGGGCGGCGGCTGTTGTGGAACGGAAAGTGGTCCAATA
CCCGTAGAATTGGTAAGCTTGCCGGATTTTGGACTGTCGGCTCTGCTTGG
TGGCTTTTGGGGCGGACTGGTTGGCTGGAGCGCTTCTTTTTGGGTTGATT
GGTACAGGTCCAGAACTTGGTGGCAGATGTCTTCGAGTATTTCCATCGTT
ACATCAGACACAAACATATCCCACCAACGCTGCTGCTGTGGCTGGCGGCC
CTCCCAGTCTTGCACAGTGAATTTGCTTAGCTTGCTGGCCAAATGGATAA
GAGCCACGGCGATAATCTCCGGCTCCCACTGTAGACAAACTACTGTGCTG
AGAGAGTCGTTGACGAAGTTCCACGCCATTTGCACCATCTTTTGCAGCTT
CTGCTGGTCGCCTTTGAAACACTTAGCGTACTTTAGGAGAAAGGTGTAAG
GATGCTCTACTTGCAAATCGAATTTGATGGTCTGCAGCAGAATACGCTCT
AGCGTCATCACCTCCTCCTTAGGGTCGTC
BO07064.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15218-PA | 1203 | CycK-RA | 340..1200 | 879..19 | 4305 | 100 | Minus |
CG15218-PB | 1203 | CycK-RB | 340..1200 | 879..19 | 4305 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:16:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CycK-RC | 5858 | CG15218-RC | 759..1619 | 879..19 | 4305 | 100 | Minus |
CycK-RB | 1679 | CG15218-RB | 559..1419 | 879..19 | 4305 | 100 | Minus |
CycK-RA | 1879 | CG15218-RA | 759..1619 | 879..19 | 4305 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:16:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22128524..22129384 | 19..879 | 4305 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:16:03 has no hits.
BO07064.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:10 Download gff for
BO07064.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-PA | 340..1203 | 18..879 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:50 Download gff for
BO07064.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15218-PB | 340..1203 | 18..879 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:10:13 Download gff for
BO07064.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-RA | 759..1619 | 19..879 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:26:59 Download gff for
BO07064.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-RA | 759..1619 | 19..879 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:26:59 Download gff for
BO07064.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22128524..22129384 | 19..879 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:10:13 Download gff for
BO07064.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22128524..22129384 | 19..879 | 100 | | Plus |
BO07064.5prime Sequence
884 bp (775 high quality bases) assembled on 2005-12-03
> BO07064.5prime
GAAGTTATCAGTCGACATGCCGTGCTGGTATTACGACAAAAAGGAGCTGC
GGGAGACGCCCTCGATCTTGGATGGAATAAGCTTCGAAACGGAGCGGCGG
TACAGAAAAGAAGGTGCTCGATTTATTATGGAATGTGGCACCAAAATGGG
CTTGGGCCACAACACGATGGCCACCGGCGTTGTATATTTTCACCGATTTT
ACATGTTTCATTCGTTCCGGAGTTTCCCCCGGTACGTGACTGCGTGCTGC
TGCCTGTTCTTTGCTGGCAAGGTGGAGGAGACGCCAAAGAAGTGTCGCGA
CATTATTAAAACTGCGCGTGGCATCCTTACCGACAATTACTTCTACTCGT
TTGGCGACGACCCTAAGGAGGAGGTGATGACGCTAGAGCGTATTCTGCTG
CAGACCATCAAATTCGATTTGCAAGTAGAGCATCCTTACACCTTTCTCCT
AAAGTACGCTAAGTGTTTCAAAGGCGACCAGCAGAAGCTGCAAAAGATGG
TGCAAATGGCGTGGAACTTCGTCAACGACTCTCTCAGCACAGTAGTTTGT
CTACAGTGGGAGCCGGAGATTATCGCCGTGGCTCTTATCCATTTGGCCAG
CAAGCTAAGCAAATTCACTGTGCAAGACTGGGAGGGCCGCCAGCCACAGC
AGCAGCGTTGGTGGGATATGTTTGTGTCTGATGTAACGATGGAAATACTC
GAAGACATCTGCCACCAAGTTCTGGACCTGTACCAATCAACCCAAAAAGA
AGCGCTCCAGCCAACCAGTCCGCCCCAAAAGCCACCAAGCAGAGCCGACA
GTCCAAAATCCGGCAAGCTTACCAATTCTACGGGTATTGGACCACTTTTC
GTTCCACAACAGCCGCCGCCCCCCGTATGTGGCA
BO07064.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15218-PA | 1203 | CycK-RA | 1..868 | 17..884 | 4315 | 99.8 | Plus |
CG15218-PB | 1203 | CycK-RB | 1..868 | 17..884 | 4315 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:33:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CycK-RC | 5858 | CG15218-RC | 420..1287 | 17..884 | 4325 | 99.9 | Plus |
CycK-RB | 1679 | CG15218-RB | 220..1087 | 17..884 | 4325 | 99.9 | Plus |
CycK-RA | 1879 | CG15218-RA | 420..1287 | 17..884 | 4325 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:33:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22128856..22129723 | 884..17 | 4325 | 99.9 | Minus |
2L | 23513712 | 2L | 22131022..22131126 | 263..159 | 345 | 88.6 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:33:37 has no hits.
BO07064.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:11 Download gff for
BO07064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-PA | 1..867 | 17..883 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:46:51 Download gff for
BO07064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15218-PB | 1..867 | 17..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:31:17 Download gff for
BO07064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-RA | 416..1286 | 13..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:10:34 Download gff for
BO07064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-RA | 416..1286 | 13..883 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:10:34 Download gff for
BO07064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22128857..22129725 | 13..883 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:31:17 Download gff for
BO07064.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22128857..22129725 | 13..883 | 99 | | Minus |
BO07064.complete Sequence
1234 bp (1234 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630644
> BO07064.complete
GAAGTTATCAGTCGACATGCCGTGCTGGTATTACGACAAAAAGGAGCTGC
GGGAGACGCCCTCGATCTTGGATGGAATAAGCTTCGAAACGGAGCGGCGG
TACAGAAAAGAAGGTGCTCGATTTATTATGGAATGTGGCACCAAAATGGG
CTTGGGCCACAACACGATGGCCACCGGCGTTGTATATTTTCACCGATTTT
ACATGTTTCATTCGTTCCGGAGTTTCCCCCGGTACGTGACTGCGTGCTGC
TGCCTGTTCTTTGCTGGCAAGGTGGAGGAGACGCCAAAGAAGTGTCGCGA
CATTATTAAAACTGCGCGTGGCATCCTTACCGACAATTACTTCTACTCGT
TTGGCGACGACCCTAAGGAGGAGGTGATGACGCTAGAGCGTATTCTGCTG
CAGACCATCAAATTCGATTTGCAAGTAGAGCATCCTTACACCTTTCTCCT
AAAGTACGCTAAGTGTTTCAAAGGCGACCAGCAGAAGCTGCAAAAGATGG
TGCAAATGGCGTGGAACTTCGTCAACGACTCTCTCAGCACAGTAGTTTGT
CTACAGTGGGAGCCGGAGATTATCGCCGTGGCTCTTATCCATTTGGCCAG
CAAGCTAAGCAAATTCACTGTGCAAGACTGGGAGGGCCGCCAGCCACAGC
AGCAGCGTTGGTGGGATATGTTTGTGTCTGATGTAACGATGGAAATACTC
GAAGACATCTGCCACCAAGTTCTGGACCTGTACCAATCAACCCAAAAAGA
AGCGCTCCAGCCAACCAGTCCGCCCCAAAAGCCACCAAGCAGAGCCGACA
GTCCAAAATCCGGCAAGCTTACCAATTCTACGGGTATTGGACCACTTTCC
GTTCCACAACAGCCGCCGCCCCCCGTATGTGGCAACGGTGGCGTGCTGGA
AGTTAGCAACATTCAGAGCATTAAATCCCTAGCCAGTGGCGTGCCAATCA
TTGGTCCTAGCGACTCCCAGAACCTGTTACAGGGCCCAACACCACCAGGT
CAGCCATCCGGGTACCACATTTATCATGCTCCTCCACCGCCGCCCCCGCC
GGTAGTGCCTATGCCGCCGTACCCCTCTTCCGGATGGGGAGTCCAGCAGA
CAGTGGTCGGACACTATAGCGGGAGCGCTGCACCACCACCACCAATGCCG
CCTAGCTTGCCTCCAGGAGCCAGTGGATACTACAACGCCGGTGGGCGTCC
ATCGCAGCAGCGCTACGCAAGCTTTCTAGACCAT
BO07064.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:10:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CycK-RC | 1203 | CG15218-PC | 1..1200 | 17..1216 | 6000 | 100 | Plus |
CycK-RB | 1203 | CG15218-PB | 1..1200 | 17..1216 | 6000 | 100 | Plus |
CycK-RA | 1203 | CG15218-PA | 1..1200 | 17..1216 | 6000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:10:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CycK-RC | 5858 | CG15218-RC | 420..1619 | 17..1216 | 6000 | 100 | Plus |
CycK-RB | 1679 | CG15218-RB | 220..1419 | 17..1216 | 6000 | 100 | Plus |
CycK-RA | 1879 | CG15218-RA | 420..1619 | 17..1216 | 6000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:10:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22128524..22129723 | 1216..17 | 6000 | 100 | Minus |
2L | 23513712 | 2L | 22131022..22131126 | 263..159 | 345 | 88.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:10:34 has no hits.
BO07064.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:30 Download gff for
BO07064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-RB | 1..1203 | 17..1217 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:41:03 Download gff for
BO07064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-RB | 189..1392 | 13..1216 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:35 Download gff for
BO07064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-RA | 420..1619 | 17..1218 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:30 Download gff for
BO07064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-RB | 189..1392 | 13..1216 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:28 Download gff for
BO07064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycK-RA | 420..1619 | 17..1218 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:28 Download gff for
BO07064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22128522..22129723 | 17..1218 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:35 Download gff for
BO07064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22128522..22129723 | 17..1218 | 99 | | Minus |
BO07064.pep Sequence
Translation from 16 to 1234
> BO07064.pep
MPCWYYDKKELRETPSILDGISFETERRYRKEGARFIMECGTKMGLGHNT
MATGVVYFHRFYMFHSFRSFPRYVTACCCLFFAGKVEETPKKCRDIIKTA
RGILTDNYFYSFGDDPKEEVMTLERILLQTIKFDLQVEHPYTFLLKYAKC
FKGDQQKLQKMVQMAWNFVNDSLSTVVCLQWEPEIIAVALIHLASKLSKF
TVQDWEGRQPQQQRWWDMFVSDVTMEILEDICHQVLDLYQSTQKEALQPT
SPPQKPPSRADSPKSGKLTNSTGIGPLSVPQQPPPPVCGNGGVLEVSNIQ
SIKSLASGVPIIGPSDSQNLLQGPTPPGQPSGYHIYHAPPPPPPPVVPMP
PYPSSGWGVQQTVVGHYSGSAAPPPPMPPSLPPGASGYYNAGGRPSQQRY
ASFLDH
BO07064.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CycK-PC | 400 | CG15218-PC | 1..400 | 1..400 | 2188 | 100 | Plus |
CycK-PB | 400 | CG15218-PB | 1..400 | 1..400 | 2188 | 100 | Plus |
CycK-PA | 400 | CG15218-PA | 1..400 | 1..400 | 2188 | 100 | Plus |
CycT-PC | 1097 | CG6292-PC | 45..275 | 4..242 | 323 | 31.2 | Plus |
CycT-PB | 1097 | CG6292-PB | 45..275 | 4..242 | 323 | 31.2 | Plus |