Clone Sequence Records
BO07075.3prime Sequence
899 bp (806 high quality bases) assembled on 2005-12-03
> BO07075.3prime
ATGGTCTAGAAAGCTTGCGAATAAGCCAATTTGTTTCAGATTGTTCTTGA
TGATCACATCGGTGACGGCATCGAAGACGAACTTCACGTTGTTCGTATCC
GTGGCGCAGGTGAGATGCGTGTATATCTCCTTTTGGTCTTTTCGCTTGTT
CAGGTTTTCGAACTTCATGCGAATGTAGTTGGCCGCCTCCTCGAAGGTGT
TGGTTCCTGTGTACTCTGGGAAGCATATCGTCAGCGGAGATCTCTTGATC
TTCTCCTCAAACAGATCCTTCTTGTTGAGGAACAGTATTATGGATGTTTC
CACAAACCACTTGGAGTTGCAGATGGAATCGAACAGCTTCAGGGACTCAA
TCATACGATTCATCTCTTCGTCCTCGGCCAATACTAGATCGTAACCTGAT
AGCGCGACGCAGAAGATTATGGCCGTAACGCCCTCGAAGCAATGAATCCA
CTTTTTGCGCTCCGATCGCTGGCCACCCACATCGAAAAGTTTGAAGTGCA
GCTGCTTGCAGGAGAAGTGTGTCTCGATGATGCCAGTGGTCTTCACCCGC
GTGCGTAGCACATCCTGCTGCGTGGGTATGTAGTTCGGTTGCGCGATCCT
ATCCAGCGAATTTAGATAGTATCCCGCCGAGTCATTCAACTGATATTCGC
GCGATCGGGCGAAGCTCTGCTGTACGCCACCGTCTGCCCAGAGTTTCTTC
ATCAGGAGCACGATCTCGGGCAGCAGGATGCCCTCGTCGGCGGCAGAGGC
GTGTGTGAAGAACTGGCGGGCAATGTCCGTTCGGCTCGGATCGGCAAACT
CGATCTTCAGGCGTCCCATTGCGCGGATGATCACCATTAGACTCTGCACC
GTGTTGCTGAAGACGACGCGACGATACTCCTCGCATTCCTCCTGCGAGT
BO07075.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10060-PA | 1068 | G-ialpha65A-RA | 185..1065 | 899..19 | 4405 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:59:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphai-RA | 2067 | CG10060-RA | 591..1471 | 899..19 | 4405 | 100 | Minus |
Galphao-RJ | 1785 | CG2204-RJ | 263..612 | 555..206 | 440 | 75.4 | Minus |
Galphao-RI | 5457 | CG2204-RI | 920..1269 | 555..206 | 440 | 75.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:59:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6974002..6974410 | 491..899 | 2045 | 100 | Plus |
3L | 28110227 | 3L | 6973589..6973780 | 206..397 | 960 | 100 | Plus |
3L | 28110227 | 3L | 6973346..6973535 | 19..208 | 950 | 100 | Plus |
3L | 28110227 | 3L | 6973836..6973932 | 394..490 | 485 | 100 | Plus |
2R | 25286936 | 2R | 10461302..10461444 | 348..206 | 220 | 76.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:59:13 has no hits.
BO07075.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:32 Download gff for
BO07075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10060-PA | 185..1068 | 16..899 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:20 Download gff for
BO07075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10060-PA | 185..1068 | 16..899 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:44:41 Download gff for
BO07075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphai-RA | 591..1471 | 19..899 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:03:17 Download gff for
BO07075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphai-RA | 591..1471 | 19..899 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:03:17 Download gff for
BO07075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6973346..6973533 | 19..206 | 100 | <- | Plus |
3L | 6973590..6973778 | 207..395 | 100 | <- | Plus |
3L | 6973838..6973932 | 396..490 | 100 | <- | Plus |
3L | 6974002..6974410 | 491..899 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:44:41 Download gff for
BO07075.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6966446..6966633 | 19..206 | 100 | <- | Plus |
arm_3L | 6966690..6966878 | 207..395 | 100 | <- | Plus |
arm_3L | 6966938..6967032 | 396..490 | 100 | <- | Plus |
arm_3L | 6967102..6967510 | 491..899 | 100 | | Plus |
BO07075.5prime Sequence
850 bp (789 high quality bases) assembled on 2005-12-03
> BO07075.5prime
GAAGTTATCAGTCGACATGGGTTGTGCCGTGAGTACAGCACGCGATAAGG
AGGCCATCGAGCGGTCGAAGAACATCGATCGCGCCCTGCGGGCGGAGGGC
GAGCGGGCCGCCTCGGAGGTGAAACTGCTGCTGCTGGGAGCCGGAGAGTC
GGGCAAGTCAACGATTGTGAAACAGATGAAGATCATCCATGACACGGGCT
ACTCGCAGGAGGAATGCGAGGAGTATCGTCGCGTCGTCTTCAGCAACACG
GTGCAGAGTCTAATGGTGATCATCCGCGCAATGGGACGCCTGAAGATCGA
GTTTGCCGATCCGAGCCGAACGGACATTGCCCGCCAGTTCTTCACACACG
CCTCTGCCGCCGACGAGGGCATCCTGCTGCCCGAGATCGTGCTCCTGATG
AAGAAACTCTGGGCAGACGGTGGCGTACAGCAGAGCTTCGCCCGATCGCG
CGAATATCAGTTGAATGACTCGGCGGGATACTATCTAAATTCGCTGGATA
GGATCGCGCAACCGAACTACATACCCACGCAGCAGGATGTGCTACGCACG
CGGGTGAAGACCACTGGCATCATCGAGACACACTTCTCCTGCAAGCAGCT
GCACTTCAAACTTTTCGATGTGGGTGGCCAGCGATCGGAGCGCAAAAAGT
GGATTCATTGCTTCGAGGGCGTTACGGCCATAATCTTCTGCGTCGCGCTA
TCAGGTTACGATCTAGTATTGGCCGAGGACGAAGAGATGAATCGTATGAT
TGAGTCCCTGAAGCTGTTCGATTCCATCTGCAACTCCAAGTGGTTTGTGG
AAACATCCATAATACTGTTCCCTCAACAGAAGGATCTGTTTGAGGAGAAG
BO07075.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10060-PA | 1068 | G-ialpha65A-RA | 1..805 | 17..821 | 4025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:15:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphai-RA | 2067 | CG10060-RA | 407..1240 | 17..850 | 4125 | 99.8 | Plus |
Galphao-RJ | 1785 | CG2204-RJ | 263..568 | 545..850 | 330 | 74.3 | Plus |
Galphao-RI | 5457 | CG2204-RI | 920..1225 | 545..850 | 330 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:15:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6974002..6974474 | 609..137 | 2365 | 100 | Minus |
3L | 28110227 | 3L | 6973633..6973780 | 850..703 | 665 | 96.6 | Minus |
3L | 28110227 | 3L | 6979517..6979638 | 138..17 | 610 | 100 | Minus |
3L | 28110227 | 3L | 6973836..6973932 | 706..610 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:15:52 has no hits.
BO07075.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:34 Download gff for
BO07075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10060-PA | 1..834 | 17..850 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:21 Download gff for
BO07075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10060-PA | 1..834 | 17..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:46:31 Download gff for
BO07075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphai-RA | 401..1240 | 12..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:50:03 Download gff for
BO07075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphai-RA | 401..1240 | 12..850 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:50:03 Download gff for
BO07075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6973633..6973778 | 705..850 | 98 | <- | Minus |
3L | 6973838..6973932 | 610..704 | 100 | <- | Minus |
3L | 6974002..6974473 | 138..609 | 100 | <- | Minus |
3L | 6979518..6979644 | 12..137 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:46:31 Download gff for
BO07075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6966733..6966878 | 705..850 | 98 | <- | Minus |
arm_3L | 6966938..6967032 | 610..704 | 100 | <- | Minus |
arm_3L | 6967102..6967573 | 138..609 | 100 | <- | Minus |
arm_3L | 6972618..6972744 | 12..137 | 98 | | Minus |
BO07075.complete Sequence
1099 bp (1099 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630652
> BO07075.complete
GAAGTTATCAGTCGACATGGGTTGTGCCGTGAGTACAGCACGCGATAAGG
AGGCCATCGAGCGGTCGAAGAACATCGATCGCGCCCTGCGGGCGGAGGGC
GAGCGGGCCGCCTCGGAGGTGAAACTGCTGCTGCTGGGAGCCGGAGAGTC
GGGCAAGTCAACGATTGTGAAACAGATGAAGATCATCCATGACACGGGCT
ACTCGCAGGAGGAATGCGAGGAGTATCGTCGCGTCGTCTTCAGCAACACG
GTGCAGAGTCTAATGGTGATCATCCGCGCAATGGGACGCCTGAAGATCGA
GTTTGCCGATCCGAGCCGAACGGACATTGCCCGCCAGTTCTTCACACACG
CCTCTGCCGCCGACGAGGGCATCCTGCTGCCCGAGATCGTGCTCCTGATG
AAGAAACTCTGGGCAGACGGTGGCGTACAGCAGAGCTTCGCCCGATCGCG
CGAATATCAGTTGAATGACTCGGCGGGATACTATCTAAATTCGCTGGATA
GGATCGCGCAACCGAACTACATACCCACGCAGCAGGATGTGCTACGCACG
CGGGTGAAGACCACTGGCATCATCGAGACACACTTCTCCTGCAAGCAGCT
GCACTTCAAACTTTTCGATGTGGGTGGCCAGCGATCGGAGCGCAAAAAGT
GGATTCATTGCTTCGAGGGCGTTACGGCCATAATCTTCTGCGTCGCGCTA
TCAGGTTACGATCTAGTATTGGCCGAGGACGAAGAGATGAATCGTATGAT
TGAGTCCCTGAAGCTGTTCGATTCCATCTGCAACTCCAAGTGGTTTGTGG
AAACATCCATAATACTGTTCCTCAACAAGAAGGATCTGTTTGAGGAGAAG
ATCAAGAGATCTCCGCTGACGATATGCTTCCCAGAGTACACAGGAACCAA
CACCTTCGAGGAGGCGGCCAACTACATTCGCATGAAGTTCGAAAACCTGA
ACAAGCGAAAAGACCAAAAGGAGATATACACGCATCTCACCTGCGCCACG
GATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCAT
CAAGAACAATCTGAAACAAATTGGCTTATTCGCAAGCTTTCTAGACCAT
BO07075.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:51:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphai-RA | 1068 | CG10060-PA | 1..1065 | 17..1081 | 5325 | 100 | Plus |
Galphao-RI | 1065 | CG2204-PI | 529..878 | 545..894 | 415 | 74.6 | Plus |
Galphao-RH | 1065 | CG2204-PH | 529..878 | 545..894 | 415 | 74.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphai-RA | 2067 | CG10060-RA | 407..1471 | 17..1081 | 5325 | 100 | Plus |
Galphao-RJ | 1785 | CG2204-RJ | 263..612 | 545..894 | 415 | 74.6 | Plus |
Galphao-RI | 5457 | CG2204-RI | 920..1269 | 545..894 | 415 | 74.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6974002..6974474 | 609..137 | 2365 | 100 | Minus |
3L | 28110227 | 3L | 6973589..6973780 | 894..703 | 960 | 100 | Minus |
3L | 28110227 | 3L | 6973346..6973535 | 1081..892 | 950 | 100 | Minus |
3L | 28110227 | 3L | 6979517..6979638 | 138..17 | 610 | 100 | Minus |
3L | 28110227 | 3L | 6973836..6973932 | 706..610 | 485 | 100 | Minus |
2R | 25286936 | 2R | 10461302..10461444 | 752..894 | 220 | 76.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:51:29 has no hits.
BO07075.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:23 Download gff for
BO07075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-ialpha65A-RA | 1..1068 | 17..1084 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:54 Download gff for
BO07075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-ialpha65A-RA | 410..1480 | 12..1081 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:06:18 Download gff for
BO07075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphai-RA | 407..1471 | 17..1083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:23 Download gff for
BO07075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-ialpha65A-RA | 410..1480 | 12..1081 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:06:05 Download gff for
BO07075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphai-RA | 407..1471 | 17..1083 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:06:05 Download gff for
BO07075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6973343..6973533 | 894..1083 | 98 | <- | Minus |
3L | 6973590..6973778 | 705..893 | 100 | <- | Minus |
3L | 6973838..6973932 | 610..704 | 100 | <- | Minus |
3L | 6974002..6974473 | 138..609 | 100 | <- | Minus |
3L | 6979518..6979638 | 17..137 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:06:18 Download gff for
BO07075.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6966443..6966633 | 894..1083 | 98 | <- | Minus |
arm_3L | 6966690..6966878 | 705..893 | 100 | <- | Minus |
arm_3L | 6966938..6967032 | 610..704 | 100 | <- | Minus |
arm_3L | 6967102..6967573 | 138..609 | 100 | <- | Minus |
arm_3L | 6972618..6972738 | 17..137 | 100 | | Minus |
BO07075.pep Sequence
Translation from 16 to 1099
> BO07075.pep
MGCAVSTARDKEAIERSKNIDRALRAEGERAASEVKLLLLGAGESGKSTI
VKQMKIIHDTGYSQEECEEYRRVVFSNTVQSLMVIIRAMGRLKIEFADPS
RTDIARQFFTHASAADEGILLPEIVLLMKKLWADGGVQQSFARSREYQLN
DSAGYYLNSLDRIAQPNYIPTQQDVLRTRVKTTGIIETHFSCKQLHFKLF
DVGGQRSERKKWIHCFEGVTAIIFCVALSGYDLVLAEDEEMNRMIESLKL
FDSICNSKWFVETSIILFLNKKDLFEEKIKRSPLTICFPEYTGTNTFEEA
ANYIRMKFENLNKRKDQKEIYTHLTCATDTNNVKFVFDAVTDVIIKNNLK
QIGLFASFLDH
BO07075.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphai-PA | 355 | CG10060-PA | 1..355 | 1..355 | 1821 | 100 | Plus |
Galphao-PH | 354 | CG2204-PH | 1..354 | 1..355 | 1165 | 64 | Plus |
Galphao-PG | 354 | CG2204-PG | 1..354 | 1..355 | 1165 | 64 | Plus |
Galphao-PF | 354 | CG2204-PF | 1..354 | 1..355 | 1165 | 64 | Plus |
Galphao-PE | 354 | CG2204-PE | 1..354 | 1..355 | 1165 | 64 | Plus |