Clone BO07075 Report

Search the DGRC for BO07075

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:70
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptGalphai-RA
Protein status:BO07075.pep: validated full length
Sequenced Size:1099

Clone Sequence Records

BO07075.3prime Sequence

899 bp (806 high quality bases) assembled on 2005-12-03

> BO07075.3prime
ATGGTCTAGAAAGCTTGCGAATAAGCCAATTTGTTTCAGATTGTTCTTGA
TGATCACATCGGTGACGGCATCGAAGACGAACTTCACGTTGTTCGTATCC
GTGGCGCAGGTGAGATGCGTGTATATCTCCTTTTGGTCTTTTCGCTTGTT
CAGGTTTTCGAACTTCATGCGAATGTAGTTGGCCGCCTCCTCGAAGGTGT
TGGTTCCTGTGTACTCTGGGAAGCATATCGTCAGCGGAGATCTCTTGATC
TTCTCCTCAAACAGATCCTTCTTGTTGAGGAACAGTATTATGGATGTTTC
CACAAACCACTTGGAGTTGCAGATGGAATCGAACAGCTTCAGGGACTCAA
TCATACGATTCATCTCTTCGTCCTCGGCCAATACTAGATCGTAACCTGAT
AGCGCGACGCAGAAGATTATGGCCGTAACGCCCTCGAAGCAATGAATCCA
CTTTTTGCGCTCCGATCGCTGGCCACCCACATCGAAAAGTTTGAAGTGCA
GCTGCTTGCAGGAGAAGTGTGTCTCGATGATGCCAGTGGTCTTCACCCGC
GTGCGTAGCACATCCTGCTGCGTGGGTATGTAGTTCGGTTGCGCGATCCT
ATCCAGCGAATTTAGATAGTATCCCGCCGAGTCATTCAACTGATATTCGC
GCGATCGGGCGAAGCTCTGCTGTACGCCACCGTCTGCCCAGAGTTTCTTC
ATCAGGAGCACGATCTCGGGCAGCAGGATGCCCTCGTCGGCGGCAGAGGC
GTGTGTGAAGAACTGGCGGGCAATGTCCGTTCGGCTCGGATCGGCAAACT
CGATCTTCAGGCGTCCCATTGCGCGGATGATCACCATTAGACTCTGCACC
GTGTTGCTGAAGACGACGCGACGATACTCCTCGCATTCCTCCTGCGAGT

BO07075.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10060-PA 1068 G-ialpha65A-RA 185..1065 899..19 4405 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
Galphai-RA 2067 CG10060-RA 591..1471 899..19 4405 100 Minus
Galphao-RJ 1785 CG2204-RJ 263..612 555..206 440 75.4 Minus
Galphao-RI 5457 CG2204-RI 920..1269 555..206 440 75.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:59:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6974002..6974410 491..899 2045 100 Plus
3L 28110227 3L 6973589..6973780 206..397 960 100 Plus
3L 28110227 3L 6973346..6973535 19..208 950 100 Plus
3L 28110227 3L 6973836..6973932 394..490 485 100 Plus
2R 25286936 2R 10461302..10461444 348..206 220 76.9 Minus
Blast to na_te.dros performed on 2015-02-11 23:59:13 has no hits.

BO07075.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:32 Download gff for BO07075.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10060-PA 185..1068 16..899 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:20 Download gff for BO07075.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10060-PA 185..1068 16..899 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:44:41 Download gff for BO07075.3prime
Subject Subject Range Query Range Percent Splice Strand
Galphai-RA 591..1471 19..899 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:03:17 Download gff for BO07075.3prime
Subject Subject Range Query Range Percent Splice Strand
Galphai-RA 591..1471 19..899 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:03:17 Download gff for BO07075.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 6973346..6973533 19..206 100 <- Plus
3L 6973590..6973778 207..395 100 <- Plus
3L 6973838..6973932 396..490 100 <- Plus
3L 6974002..6974410 491..899 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:44:41 Download gff for BO07075.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6966446..6966633 19..206 100 <- Plus
arm_3L 6966690..6966878 207..395 100 <- Plus
arm_3L 6966938..6967032 396..490 100 <- Plus
arm_3L 6967102..6967510 491..899 100   Plus

BO07075.5prime Sequence

850 bp (789 high quality bases) assembled on 2005-12-03

> BO07075.5prime
GAAGTTATCAGTCGACATGGGTTGTGCCGTGAGTACAGCACGCGATAAGG
AGGCCATCGAGCGGTCGAAGAACATCGATCGCGCCCTGCGGGCGGAGGGC
GAGCGGGCCGCCTCGGAGGTGAAACTGCTGCTGCTGGGAGCCGGAGAGTC
GGGCAAGTCAACGATTGTGAAACAGATGAAGATCATCCATGACACGGGCT
ACTCGCAGGAGGAATGCGAGGAGTATCGTCGCGTCGTCTTCAGCAACACG
GTGCAGAGTCTAATGGTGATCATCCGCGCAATGGGACGCCTGAAGATCGA
GTTTGCCGATCCGAGCCGAACGGACATTGCCCGCCAGTTCTTCACACACG
CCTCTGCCGCCGACGAGGGCATCCTGCTGCCCGAGATCGTGCTCCTGATG
AAGAAACTCTGGGCAGACGGTGGCGTACAGCAGAGCTTCGCCCGATCGCG
CGAATATCAGTTGAATGACTCGGCGGGATACTATCTAAATTCGCTGGATA
GGATCGCGCAACCGAACTACATACCCACGCAGCAGGATGTGCTACGCACG
CGGGTGAAGACCACTGGCATCATCGAGACACACTTCTCCTGCAAGCAGCT
GCACTTCAAACTTTTCGATGTGGGTGGCCAGCGATCGGAGCGCAAAAAGT
GGATTCATTGCTTCGAGGGCGTTACGGCCATAATCTTCTGCGTCGCGCTA
TCAGGTTACGATCTAGTATTGGCCGAGGACGAAGAGATGAATCGTATGAT
TGAGTCCCTGAAGCTGTTCGATTCCATCTGCAACTCCAAGTGGTTTGTGG
AAACATCCATAATACTGTTCCCTCAACAGAAGGATCTGTTTGAGGAGAAG

BO07075.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10060-PA 1068 G-ialpha65A-RA 1..805 17..821 4025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:15:57
Subject Length Description Subject Range Query Range Score Percent Strand
Galphai-RA 2067 CG10060-RA 407..1240 17..850 4125 99.8 Plus
Galphao-RJ 1785 CG2204-RJ 263..568 545..850 330 74.3 Plus
Galphao-RI 5457 CG2204-RI 920..1225 545..850 330 74.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:15:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6974002..6974474 609..137 2365 100 Minus
3L 28110227 3L 6973633..6973780 850..703 665 96.6 Minus
3L 28110227 3L 6979517..6979638 138..17 610 100 Minus
3L 28110227 3L 6973836..6973932 706..610 485 100 Minus
Blast to na_te.dros performed on 2015-02-11 23:15:52 has no hits.

BO07075.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:34 Download gff for BO07075.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10060-PA 1..834 17..850 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:21 Download gff for BO07075.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10060-PA 1..834 17..850 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:46:31 Download gff for BO07075.5prime
Subject Subject Range Query Range Percent Splice Strand
Galphai-RA 401..1240 12..850 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:50:03 Download gff for BO07075.5prime
Subject Subject Range Query Range Percent Splice Strand
Galphai-RA 401..1240 12..850 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:50:03 Download gff for BO07075.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6973633..6973778 705..850 98 <- Minus
3L 6973838..6973932 610..704 100 <- Minus
3L 6974002..6974473 138..609 100 <- Minus
3L 6979518..6979644 12..137 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:46:31 Download gff for BO07075.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6966733..6966878 705..850 98 <- Minus
arm_3L 6966938..6967032 610..704 100 <- Minus
arm_3L 6967102..6967573 138..609 100 <- Minus
arm_3L 6972618..6972744 12..137 98   Minus

BO07075.complete Sequence

1099 bp (1099 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630652

> BO07075.complete
GAAGTTATCAGTCGACATGGGTTGTGCCGTGAGTACAGCACGCGATAAGG
AGGCCATCGAGCGGTCGAAGAACATCGATCGCGCCCTGCGGGCGGAGGGC
GAGCGGGCCGCCTCGGAGGTGAAACTGCTGCTGCTGGGAGCCGGAGAGTC
GGGCAAGTCAACGATTGTGAAACAGATGAAGATCATCCATGACACGGGCT
ACTCGCAGGAGGAATGCGAGGAGTATCGTCGCGTCGTCTTCAGCAACACG
GTGCAGAGTCTAATGGTGATCATCCGCGCAATGGGACGCCTGAAGATCGA
GTTTGCCGATCCGAGCCGAACGGACATTGCCCGCCAGTTCTTCACACACG
CCTCTGCCGCCGACGAGGGCATCCTGCTGCCCGAGATCGTGCTCCTGATG
AAGAAACTCTGGGCAGACGGTGGCGTACAGCAGAGCTTCGCCCGATCGCG
CGAATATCAGTTGAATGACTCGGCGGGATACTATCTAAATTCGCTGGATA
GGATCGCGCAACCGAACTACATACCCACGCAGCAGGATGTGCTACGCACG
CGGGTGAAGACCACTGGCATCATCGAGACACACTTCTCCTGCAAGCAGCT
GCACTTCAAACTTTTCGATGTGGGTGGCCAGCGATCGGAGCGCAAAAAGT
GGATTCATTGCTTCGAGGGCGTTACGGCCATAATCTTCTGCGTCGCGCTA
TCAGGTTACGATCTAGTATTGGCCGAGGACGAAGAGATGAATCGTATGAT
TGAGTCCCTGAAGCTGTTCGATTCCATCTGCAACTCCAAGTGGTTTGTGG
AAACATCCATAATACTGTTCCTCAACAAGAAGGATCTGTTTGAGGAGAAG
ATCAAGAGATCTCCGCTGACGATATGCTTCCCAGAGTACACAGGAACCAA
CACCTTCGAGGAGGCGGCCAACTACATTCGCATGAAGTTCGAAAACCTGA
ACAAGCGAAAAGACCAAAAGGAGATATACACGCATCTCACCTGCGCCACG
GATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCAT
CAAGAACAATCTGAAACAAATTGGCTTATTCGCAAGCTTTCTAGACCAT

BO07075.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
Galphai-RA 1068 CG10060-PA 1..1065 17..1081 5325 100 Plus
Galphao-RI 1065 CG2204-PI 529..878 545..894 415 74.6 Plus
Galphao-RH 1065 CG2204-PH 529..878 545..894 415 74.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
Galphai-RA 2067 CG10060-RA 407..1471 17..1081 5325 100 Plus
Galphao-RJ 1785 CG2204-RJ 263..612 545..894 415 74.6 Plus
Galphao-RI 5457 CG2204-RI 920..1269 545..894 415 74.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6974002..6974474 609..137 2365 100 Minus
3L 28110227 3L 6973589..6973780 894..703 960 100 Minus
3L 28110227 3L 6973346..6973535 1081..892 950 100 Minus
3L 28110227 3L 6979517..6979638 138..17 610 100 Minus
3L 28110227 3L 6973836..6973932 706..610 485 100 Minus
2R 25286936 2R 10461302..10461444 752..894 220 76.9 Plus
Blast to na_te.dros performed on 2014-11-27 07:51:29 has no hits.

BO07075.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:23 Download gff for BO07075.complete
Subject Subject Range Query Range Percent Splice Strand
G-ialpha65A-RA 1..1068 17..1084 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:54 Download gff for BO07075.complete
Subject Subject Range Query Range Percent Splice Strand
G-ialpha65A-RA 410..1480 12..1081 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:06:18 Download gff for BO07075.complete
Subject Subject Range Query Range Percent Splice Strand
Galphai-RA 407..1471 17..1083 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:23 Download gff for BO07075.complete
Subject Subject Range Query Range Percent Splice Strand
G-ialpha65A-RA 410..1480 12..1081 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:06:05 Download gff for BO07075.complete
Subject Subject Range Query Range Percent Splice Strand
Galphai-RA 407..1471 17..1083 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:06:05 Download gff for BO07075.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6973343..6973533 894..1083 98 <- Minus
3L 6973590..6973778 705..893 100 <- Minus
3L 6973838..6973932 610..704 100 <- Minus
3L 6974002..6974473 138..609 100 <- Minus
3L 6979518..6979638 17..137 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:06:18 Download gff for BO07075.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6966443..6966633 894..1083 98 <- Minus
arm_3L 6966690..6966878 705..893 100 <- Minus
arm_3L 6966938..6967032 610..704 100 <- Minus
arm_3L 6967102..6967573 138..609 100 <- Minus
arm_3L 6972618..6972738 17..137 100   Minus

BO07075.pep Sequence

Translation from 16 to 1099

> BO07075.pep
MGCAVSTARDKEAIERSKNIDRALRAEGERAASEVKLLLLGAGESGKSTI
VKQMKIIHDTGYSQEECEEYRRVVFSNTVQSLMVIIRAMGRLKIEFADPS
RTDIARQFFTHASAADEGILLPEIVLLMKKLWADGGVQQSFARSREYQLN
DSAGYYLNSLDRIAQPNYIPTQQDVLRTRVKTTGIIETHFSCKQLHFKLF
DVGGQRSERKKWIHCFEGVTAIIFCVALSGYDLVLAEDEEMNRMIESLKL
FDSICNSKWFVETSIILFLNKKDLFEEKIKRSPLTICFPEYTGTNTFEEA
ANYIRMKFENLNKRKDQKEIYTHLTCATDTNNVKFVFDAVTDVIIKNNLK
QIGLFASFLDH

BO07075.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:40
Subject Length Description Subject Range Query Range Score Percent Strand
Galphai-PA 355 CG10060-PA 1..355 1..355 1821 100 Plus
Galphao-PH 354 CG2204-PH 1..354 1..355 1165 64 Plus
Galphao-PG 354 CG2204-PG 1..354 1..355 1165 64 Plus
Galphao-PF 354 CG2204-PF 1..354 1..355 1165 64 Plus
Galphao-PE 354 CG2204-PE 1..354 1..355 1165 64 Plus