Clone BO07081 Report

Search the DGRC for BO07081

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:70
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptTango11-RA
Protein status:BO07081.pep: validated full length
Sequenced Size:865

Clone Sequence Records

BO07081.3prime Sequence

863 bp (770 high quality bases) assembled on 2005-12-03

> BO07081.3prime
ATGGTCTAGAAAGCTTGCGTTGCGATTCAGCCAGAATATTGTCTTGAGAA
CGAAGTAGGCCAGGCCCAGACAGTAGACGATCTTCTCCCGCTGCGTGCGC
TGTTCATTGTTGATCTCGATGTTCAGCACCCGGCGATTCAGCTTGGCCAG
CTGGCGTCTCAGATACAGGATCTCCTCGTGGGGCGTCAGCTCGCCCATGG
GCGTGCCCTCTCGGTGCGCCAGCATTGAGGCATCCAGGTTGTTGTGCTGC
TGTTGATTCAGCTGCGAGCGCTTGCTGGCACTGCCTGTGGTCAACTGCGA
GTCCGATTCAACGGAATTGGTGTCATTGCCTTGAAATCCCATACGGGCGA
CTCCATTGGCACGCACATATTGGGTGGCATGGACCTCCTCATCGTCGGCG
TCCTCGTCGAGATCATTACCATACAAATGATGACCATTGGCCCGGATGGG
CGAGCTCTCCTCGGAGGCCGAGGGAAAGTGTTGATCGGTGAGGGTGATAA
TGCGCGGTGGCGTCTGGACGCGCACCAATCCGACCGATGGGTTCTTGGGC
AGAATGGAGTTCTCCAGCTGGATTTCCCGCGGAGCAGATCGCGTCTCCAG
ATGCTGATTGTGGCCCAGGACCACAATTCGATCCGGTACATTCATGTCGA
TCTTGTCGTGATAGTTCCAGGAGCTGATCATCCCGTTCTGGTTGGACAGC
AGCAGATCCTCGTTGGAATACTCCCCGGTGGCCTTTATTCTTTTGGGAAC
CCGCATCTTGTCGTTAATCTCGTGGGCATATTTGGCGTCGCTGTAGAGAT
CATCGTCCAATCCATTGAACATGGGCGTCGGCGATTGCGGGGTCACCATG
TCGACTGATAACT

BO07081.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG30404-PA 834 CG30404-RA 1..831 849..19 4155 100 Minus
CG30404-PB 834 CG30404-RB 1..831 849..19 4155 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
Tango11-RB 1682 CG30404-RB 206..1041 854..19 4165 99.9 Minus
Tango11-RA 1629 CG30404-RA 153..988 854..19 4165 99.9 Minus
Tango11-RC 1007 CG30404-RC 90..366 295..19 1385 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:26:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21719077..21719640 291..854 2790 99.6 Plus
2R 25286936 2R 21717421..21717699 19..297 1395 100 Plus
Blast to na_te.dros performed on 2015-02-13 05:26:40 has no hits.

BO07081.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:43 Download gff for BO07081.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30404-PA 1..834 18..849 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:33 Download gff for BO07081.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30404-PB 1..834 18..849 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:02:23 Download gff for BO07081.3prime
Subject Subject Range Query Range Percent Splice Strand
Tango11-RA 147..988 19..863 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:57:37 Download gff for BO07081.3prime
Subject Subject Range Query Range Percent Splice Strand
Tango11-RA 147..988 19..863 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:57:37 Download gff for BO07081.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21717421..21717696 19..294 100 <- Plus
2R 21719081..21719646 295..863 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:02:23 Download gff for BO07081.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17604926..17605201 19..294 100 <- Plus
arm_2R 17606586..17607151 295..863 99   Plus

BO07081.5prime Sequence

837 bp (820 high quality bases) assembled on 2005-12-03

> BO07081.5prime
GAAGTTATCAGTCGACATGGTGACCCCGCAATCGCCGACGCCCATGTTCA
ATGGATTGGACGATGATCTCTACAGCGACGCCAAATATGCCCACGAGATT
AACGACAAGATGCGGGTTCCCAAAAGAATAAAGGCCACCGGGGAGTATTC
CAACGAGGATCTGCTGCTGTCCAACCAGAACGGGATGATCAGCTCCTGGA
ACTATCACGACAAGATCGACATGAATGTACCGGATCGAATTGTGGTCCTG
GGCCACAATCAGCATCTGGAGACGCGATCTGCTCCGCGGGAAATCCAGCT
GGAGAACTCCATTCTGCCCAAGAACCCATCGGTCGGATTGGTGCGCGTCC
AGACGCCACCGCGCATTATCACCCTCACCGATCAACACTTTCCCTCGGCC
TCCGAGGAGAGCTCGCCCATCCGGGCCAATGGTCATCATTTGTATGGTAA
TGATCTCGACGAGGACGCCGACGATGAGGAGGTCCATGCCACCCAATATG
TGCGTGCCAATGGAGTCGCCCGTATGGGATTTCAAGGCAATGACACCAAT
TCCGTTGAATCGGACTCGCAGTTGACCACAGGCAGTGCCAGCAAGCGCTC
GCAGCTGAATCAACAGCAGCACAACAACCTGGATGCCTCAATGCTGGCGC
ACCGAGAGGGCACGCCCATGGGCGAGCTGACGCCCCACGAGGAGATCCTG
TATCTGAGACGCCAGCTGGCCAAGCTGAATCGCCGGGTGCTGAACATCGA
GATCAACAATGAACAGCGCACGCAGCGGGAGAAGATCGTCTACTGTCTGG
GCCTGGCCTACTTCGTTCTCAAGACAATATTCTGGCT

BO07081.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG30404-PA 834 CG30404-RA 1..821 17..837 4105 100 Plus
CG30404-PB 834 CG30404-RB 1..821 17..837 4105 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 09:53:39
Subject Length Description Subject Range Query Range Score Percent Strand
Tango11-RB 1682 CG30404-RB 206..1031 12..837 4115 99.9 Plus
Tango11-RA 1629 CG30404-RA 153..978 12..837 4115 99.9 Plus
Tango11-RC 1007 CG30404-RC 90..356 571..837 1335 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 09:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21719077..21719640 575..12 2790 99.6 Minus
2R 25286936 2R 21717431..21717699 837..569 1345 100 Minus
Blast to na_te.dros performed on 2015-02-12 09:53:39 has no hits.

BO07081.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:44 Download gff for BO07081.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30404-PA 1..821 17..837 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:35 Download gff for BO07081.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30404-PB 1..821 17..837 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:43:25 Download gff for BO07081.5prime
Subject Subject Range Query Range Percent Splice Strand
Tango11-RA 147..978 3..837 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:53:41 Download gff for BO07081.5prime
Subject Subject Range Query Range Percent Splice Strand
Tango11-RA 147..978 3..837 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:53:41 Download gff for BO07081.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21717431..21717696 572..837 100 <- Minus
2R 21719081..21719646 3..571 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:43:25 Download gff for BO07081.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17604936..17605201 572..837 100 <- Minus
arm_2R 17606586..17607151 3..571 99   Minus

BO07081.complete Sequence

865 bp (865 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630656

> BO07081.complete
GAAGTTATCAGTCGACATGGTGACCCCGCAATCGCCGACGCCCATGTTCA
ATGGATTGGACGATGATCTCTACAGCGACGCCAAATATGCCCACGAGATT
AACGACAAGATGCGGGTTCCCAAAAGAATAAAGGCCACCGGGGAGTATTC
CAACGAGGATCTGCTGCTGTCCAACCAGAACGGGATGATCAGCTCCTGGA
ACTATCACGACAAGATCGACATGAATGTACCGGATCGAATTGTGGTCCTG
GGCCACAATCAGCATCTGGAGACGCGATCTGCTCCGCGGGAAATCCAGCT
GGAGAACTCCATTCTGCCCAAGAACCCATCGGTCGGATTGGTGCGCGTCC
AGACGCCACCGCGCATTATCACCCTCACCGATCAACACTTTCCCTCGGCC
TCCGAGGAGAGCTCGCCCATCCGGGCCAATGGTCATCATTTGTATGGTAA
TGATCTCGACGAGGACGCCGACGATGAGGAGGTCCATGCCACCCAATATG
TGCGTGCCAATGGAGTCGCCCGTATGGGATTTCAAGGCAATGACACCAAT
TCCGTTGAATCGGACTCGCAGTTGACCACAGGCAGTGCCAGCAAGCGCTC
GCAGCTGAATCAACAGCAGCACAACAACCTGGATGCCTCAATGCTGGCGC
ACCGAGAGGGCACGCCCATGGGCGAGCTGACGCCCCACGAGGAGATCCTG
TATCTGAGACGCCAGCTGGCCAAGCTGAATCGCCGGGTGCTGAACATCGA
GATCAACAATGAACAGCGCACGCAGCGGGAGAAGATCGTCTACTGTCTGG
GCCTGGCCTACTTCGTTCTCAAGACAATATTCTGGCTGAATCGCAACGCA
AGCTTTCTAGACCAT

BO07081.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
Tango11-RB 834 CG30404-PB 1..831 17..847 4155 100 Plus
Tango11-RA 834 CG30404-PA 1..831 17..847 4155 100 Plus
Tango11-RC 282 CG30404-PC 3..279 571..847 1385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:42:17
Subject Length Description Subject Range Query Range Score Percent Strand
Tango11-RB 1682 CG30404-RB 206..1041 12..847 4165 99.9 Plus
Tango11-RA 1629 CG30404-RA 153..988 12..847 4165 99.9 Plus
Tango11-RC 1007 CG30404-RC 90..366 571..847 1385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:42:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21719077..21719640 575..12 2790 99.6 Minus
2R 25286936 2R 21717421..21717699 847..569 1395 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:42:15 has no hits.

BO07081.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:24 Download gff for BO07081.complete
Subject Subject Range Query Range Percent Splice Strand
Tango11-RB 1..834 17..848 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:56 Download gff for BO07081.complete
Subject Subject Range Query Range Percent Splice Strand
Tango11-RB 200..1041 3..847 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:50 Download gff for BO07081.complete
Subject Subject Range Query Range Percent Splice Strand
Tango11-RA 158..988 17..849 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:25 Download gff for BO07081.complete
Subject Subject Range Query Range Percent Splice Strand
Tango11-RB 200..1041 3..847 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:17:03 Download gff for BO07081.complete
Subject Subject Range Query Range Percent Splice Strand
Tango11-RA 158..988 17..849 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:17:03 Download gff for BO07081.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21717419..21717696 572..849 99 <- Minus
2R 21719081..21719635 17..571 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:50 Download gff for BO07081.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17604924..17605201 572..849 99 <- Minus
arm_2R 17606586..17607140 17..571 100   Minus

BO07081.pep Sequence

Translation from 16 to 865

> BO07081.pep
MVTPQSPTPMFNGLDDDLYSDAKYAHEINDKMRVPKRIKATGEYSNEDLL
LSNQNGMISSWNYHDKIDMNVPDRIVVLGHNQHLETRSAPREIQLENSIL
PKNPSVGLVRVQTPPRIITLTDQHFPSASEESSPIRANGHHLYGNDLDED
ADDEEVHATQYVRANGVARMGFQGNDTNSVESDSQLTTGSASKRSQLNQQ
QHNNLDASMLAHREGTPMGELTPHEEILYLRRQLAKLNRRVLNIEINNEQ
RTQREKIVYCLGLAYFVLKTIFWLNRNASFLDH

BO07081.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
Tango11-PB 277 CG30404-PB 1..277 1..277 1449 100 Plus
Tango11-PA 277 CG30404-PA 1..277 1..277 1449 100 Plus
Tango11-PC 93 CG30404-PC 2..93 186..277 474 100 Plus