Clone BO07084 Report

Search the DGRC for BO07084

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:70
Well:84
Vector:pDNR-Dual
Associated Gene/Transcriptwek-RA
Protein status:BO07084.pep: full length peptide match
Sequenced Size:1444

Clone Sequence Records

BO07084.3prime Sequence

880 bp (797 high quality bases) assembled on 2005-12-03

> BO07084.3prime
ATGGTCTAGAAAGCTTGCATCCTGTTTGGCCTTGGCCATCTCGCGAGTTA
TCGCTCTCAGTTCTTCCAATGTTGGCACTGGAACACGTGAAGATTCGGTT
TCATCCTCCTTGGACGCCAGTTCCGGATGTTTTTTCCATTTGTGGGAGCG
ACAGTTGGTGTTGCTGGCGAACGCCTTTCCGCAGTACTTGCATACGTAGG
GTCTGAGGCCGGTGTGTCCAAGGAGATGGATCTTCAAGGCCGTGGAGTTC
TTACAGCCGCTGCCACAAACCTCGCACTTGAAGCGCCGCTCATCCGTGTG
CACATACTTGTGCTTGTTAAGAATCGCCCGTGTCTGCAGCTTTTTGCCGC
AGACATTGCACTCAAACTTGGGCTCACCATGTGTCTGACTGTGCACTCTC
AGCCTAGCTTTGTTCTTAAAACCAGCATTGCAGACGGGGCATATACAGGG
CTTCTCTTCCGTGTGAACCAGCTGGTGCTCCACCAGCGATGTGAAGGTCT
TCAAACCCTTTCCGCAGTGATCGCAAACGTATTTCTTCGGACCGCCGTGC
ATGTCGTGCTTGTGCCTGCGCAGAGCCATGAAGGACATAAAGGTTTCGTT
GCAGATTTTGCAGGGATAATCGACGAAATTCGAACTCTGGGAGCCATGGG
GTGACATGCTCAATTCGGATGTCTTGTCATCTTGTTTGGATTTAGCATTG
TCGTCTGGTTCGCGGGAAGTTACGTTATCGCTGTCGTCCACGTTTTTCTG
TTTGCCTGAGCCCTTGGGTCTGCCTCTTTTTCGCTTCAAAGGCGGCGGGG
ATACGGCCTCGTCTTCGTCTAGAATGGCCTCCTCATCATCCGACTCGGGT
GCAGTGTACACTTTGGAATTTCGCTTAGCC

BO07084.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG4148-PA 1413 wek-RA 549..1410 880..19 4285 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
wek-RB 2033 CG4148-RB 667..1528 880..19 4295 99.9 Minus
wek-RA 1691 CG4148-RA 667..1528 880..19 4295 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:01:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15767138..15767623 395..880 2415 99.8 Plus
2L 23513712 2L 15766733..15767079 50..396 1735 100 Plus
Blast to na_te.dros performed on 2015-02-10 18:01:33 has no hits.

BO07084.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:47 Download gff for BO07084.3prime
Subject Subject Range Query Range Percent Splice Strand
wek-PA 549..1413 18..880 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:39 Download gff for BO07084.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4148-PA 549..1413 18..880 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:04:24 Download gff for BO07084.3prime
Subject Subject Range Query Range Percent Splice Strand
wek-RA 667..1528 19..880 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:33:54 Download gff for BO07084.3prime
Subject Subject Range Query Range Percent Splice Strand
wek-RA 667..1528 19..880 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:33:54 Download gff for BO07084.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 15766639..15766668 20..49 100 <- Plus
2L 15766733..15767079 50..396 100 <- Plus
2L 15767140..15767623 397..880 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:04:24 Download gff for BO07084.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15766639..15766668 20..49 100 <- Plus
arm_2L 15766733..15767079 50..396 100 <- Plus
arm_2L 15767140..15767623 397..880 99   Plus

BO07084.5prime Sequence

841 bp (801 high quality bases) assembled on 2005-12-03

> BO07084.5prime
GAAGTTATCAGTCGACATGGGAGTTCCCACAAGCGATTGGATATACTGGT
GTCGCCTGTGCGCCCGCGACGACGTTGTATACAAAGTGCGCGAGCGGGAC
GACGATCTGGTTAGGATTATCAGCAAATGCTTTGATGTGGAGATGACCCT
CGAGGAACCGGAACTGGGCAGCATGTTGTGCGAGGAGTGCTACTCGGTGA
TTGGCCAGCTGATCACCTTCTCGGATAGCGTTTCCAAAGTACAAGCCATT
TTTGAGCTTCTGCGACACTCGGAGCCGCAGGATAGCCAGGACTTGGACGC
CCTGCGTCTGGAATACGGCCTTCCGCCGGCCTGCAAGCAGGACCTCGAGT
TCCTGGACATAGACGATACGGAGGATAGGTGTTCCTTGGTAGAGGAGCTA
ACGATATCAGACCATTCCACATCTCCGTCACCCGATTTTGAAGCACAGAC
CGTGCGAACACGAGCTAATCTCAAACAGTGTAATTCCGATCCCAAAGTGC
TAGCCTCACCTACTGCATCAATTCCTGAAGTTGAAACAAAACGAAGTCGC
CGACAGCAGTTTGCGGCTAAGCGAAATTCCAAAGTGTACACTGCAACCGA
GTCGGATGATGAGGAGGCCATTCTAGACGAAGACGAGGCCGTATCCCCGC
CGCCTTTGAAGCGAAAAAGAGGCAGACCCAAGGGCTCAGGCAAACAGAAA
AACGTGGACGACAGCGATAACGTAACTTCCCGCGAACCAGACGACAATGC
TAAATCCAAACAAGATGACAAGACATCCGAATTGAGCATGTCACCCCATG
GCTCCCAGAGTTCGAATTTCGTCGATTATCCCTGCAAAATC

BO07084.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG4148-PA 1413 wek-RA 1..825 17..841 4125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:26:49
Subject Length Description Subject Range Query Range Score Percent Strand
wek-RB 2033 CG4148-RB 118..943 16..841 4130 100 Plus
wek-RA 1691 CG4148-RA 118..943 16..841 4130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15767347..15768047 841..141 3505 100 Minus
2L 23513712 2L 15768106..15768232 142..16 635 100 Minus
Blast to na_te.dros performed on 2015-02-13 05:26:48 has no hits.

BO07084.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:48 Download gff for BO07084.5prime
Subject Subject Range Query Range Percent Splice Strand
wek-PA 1..825 17..841 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:40 Download gff for BO07084.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4148-PA 1..825 17..841 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:02:25 Download gff for BO07084.5prime
Subject Subject Range Query Range Percent Splice Strand
wek-RA 112..943 7..841 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:57:40 Download gff for BO07084.5prime
Subject Subject Range Query Range Percent Splice Strand
wek-RA 112..943 7..841 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:57:40 Download gff for BO07084.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 15767347..15768045 143..841 100 <- Minus
2L 15768106..15768238 7..142 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:02:25 Download gff for BO07084.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15767347..15768045 143..841 100 <- Minus
arm_2L 15768106..15768238 7..142 97   Minus

BO07084.complete Sequence

1444 bp (1444 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630657

> BO07084.complete
GAAGTTATCAGTCGACATGGGAGTTCCCACAAGCGATTGGATATACTGGT
GTCGCCTGTGCGCCCGCGACGACGTTGTATACAAAGTGCGCGAGCGGGAC
GACGATCTGGTTAGGATTATCAGCAAATGCTTTGATGTGGAGATGACCCT
CGAGGAACCGGAACTGGGCAGCATGTTGTGCGAGGAGTGCTACTCGGTGA
TTGGCCAGCTGATCACCTTCTCGGATAGCGTTTCCAAAGTACAAGCCATT
TTTGAGCTTCTGCGACACTCGGAGCCGCAGGATAGCCAGGACTTGGACGC
CCTGCGTCTGGAATACGGCCTTCCGCCGGCCTGCAAGCAGGACCTCGAGT
TCCTGGACATAGACGATACGGAGGATAGGTGTTCCTTGGTAGAGGAGCTA
ACGATATCAGACCATTCCACATCTCCGTCACCCGATTTTGAAGCACAGAC
CGTGCGAACACGAGCTAATCTCAAACAGTGTAATTCCGATCCCAAAGTGC
TAGCCTCACCTACTGCATCAATTCCTGAAGTTGAAACAAAACGAAGTCGC
CGACAGCAGTTTGCGGCTAAGCGAAATTCCAAAGTGTACACTGCAACCGA
GTCGGATGATGAGGAGGCCATTCTAGACGAAGACGAGGCCGTATCCCCGC
CGCCTTTGAAGCGAAAAAGAGGCAGACCCAAGGGCTCAGGCAAACAGAAA
AACGTGGACGACAGCGATAACGTAACTTCCCGCGAACCAGACGACAATGC
TAAATCCAAACAAGATGACAAGACATCCGAATTGAGCATGTCACCCCATG
GCTCCCAGAGTTCGAATTTCGTCGATTATCCCTGCAAAATCTGCAACGAA
ACCTTTATGTCCTTCATGGCTCTGCGCAGGCACAAGCACGACATGCACGG
CGGTCCGAAGAAATACGTTTGCGATCACTGCGGAAAGGGTTTGAAGACCT
TCACATCGCTGGTGGAGCACCAGCTGGTTCACACGGAAGAGAAGCCCTGT
ATATGCCCCGTCTGCAATGCTGGTTTTAAGAACAAAGCTAGGCTGAGAGT
GCACAGTCAGACACATGGTGAGCCCAAGTTTGAGTGCAATGTCTGCGGCA
AAAAGCTGCAGACACGGGCGATTCTTAACAAGCACAAGTATGTGCACACG
GATGAGCGGCGCTTCAAGTGCGAGGTTTGTGGCAGCGGCTGTAAGAACTC
CACGGCCTTGAAGATCCATCTCCTTGGACACACCGGCCTCAGACCCTACG
TATGCAAGTACTGCGGAAAGGCGTTCGCCAGCAACACCAACTGTCGCTCC
CACAAATGGAAAAAACATCCGGAACTGGCGTCCAAGGAGGATGAAACCGA
ATCTTCACGTGTTCCAGTGCCAACATTGGAAGAACTGAGAGCGATAACTC
GCGAGATGGCCAAGGCCAAACAGGATGCAAGCTTTCTAGACCAT

BO07084.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
wek-RB 1413 CG4148-PB 1..1410 17..1426 7050 100 Plus
wek-RA 1413 CG4148-PA 1..1410 17..1426 7050 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
wek-RB 2033 CG4148-RB 118..1528 16..1426 7055 100 Plus
wek-RA 1691 CG4148-RA 118..1528 16..1426 7055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15767138..15768047 1050..141 4550 100 Minus
2L 23513712 2L 15766733..15767079 1395..1049 1735 100 Minus
2L 23513712 2L 15768106..15768232 142..16 635 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:44:20 has no hits.

BO07084.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:26 Download gff for BO07084.complete
Subject Subject Range Query Range Percent Splice Strand
wek-RA 1..1413 17..1427 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:58 Download gff for BO07084.complete
Subject Subject Range Query Range Percent Splice Strand
wek-RA 80..1496 7..1426 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:30 Download gff for BO07084.complete
Subject Subject Range Query Range Percent Splice Strand
wek-RA 119..1528 17..1428 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:26 Download gff for BO07084.complete
Subject Subject Range Query Range Percent Splice Strand
wek-RA 80..1496 7..1426 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:15 Download gff for BO07084.complete
Subject Subject Range Query Range Percent Splice Strand
wek-RA 119..1528 17..1428 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:15 Download gff for BO07084.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15766636..15766668 1396..1428 93 <- Minus
2L 15766733..15767079 1049..1395 100 <- Minus
2L 15767140..15768045 143..1048 100 <- Minus
2L 15768106..15768231 17..142 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:30 Download gff for BO07084.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15766636..15766668 1396..1428 93 <- Minus
arm_2L 15766733..15767079 1049..1395 100 <- Minus
arm_2L 15767140..15768045 143..1048 100 <- Minus
arm_2L 15768106..15768231 17..142 100   Minus

BO07084.pep Sequence

Translation from 16 to 1444

> BO07084.pep
MGVPTSDWIYWCRLCARDDVVYKVRERDDDLVRIISKCFDVEMTLEEPEL
GSMLCEECYSVIGQLITFSDSVSKVQAIFELLRHSEPQDSQDLDALRLEY
GLPPACKQDLEFLDIDDTEDRCSLVEELTISDHSTSPSPDFEAQTVRTRA
NLKQCNSDPKVLASPTASIPEVETKRSRRQQFAAKRNSKVYTATESDDEE
AILDEDEAVSPPPLKRKRGRPKGSGKQKNVDDSDNVTSREPDDNAKSKQD
DKTSELSMSPHGSQSSNFVDYPCKICNETFMSFMALRRHKHDMHGGPKKY
VCDHCGKGLKTFTSLVEHQLVHTEEKPCICPVCNAGFKNKARLRVHSQTH
GEPKFECNVCGKKLQTRAILNKHKYVHTDERRFKCEVCGSGCKNSTALKI
HLLGHTGLRPYVCKYCGKAFASNTNCRSHKWKKHPELASKEDETESSRVP
VPTLEELRAITREMAKAKQDASFLDH

BO07084.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
wek-PB 470 CG4148-PB 1..470 1..470 2521 100 Plus
wek-PA 470 CG4148-PA 1..470 1..470 2521 100 Plus
CG17568-PA 513 CG17568-PA 5..508 6..466 823 38.5 Plus
CG10366-PA 578 CG10366-PA 21..500 4..462 539 28.7 Plus
CG6254-PA 634 CG6254-PA 392..580 270..457 524 51.3 Plus
CG10366-PA 578 CG10366-PA 349..514 257..417 178 27.6 Plus