Clone Sequence Records
BO07086.3prime Sequence
921 bp (865 high quality bases) assembled on 2005-12-03
> BO07086.3prime
ATGGTCTAGAAAGCTTGCAAGTAGACCCTGGCGTTTTAGATCCTCGAACG
TCTTTCGGTTGACAACGTTTCCCAGCGAGTCCTCGAACTCTTCCTCCTGA
TCGGCTACCCAGCGCTCGCTCTGCTTTTGCGACTTGAGTTTTTCCCACAA
CGTGATTGCGTCCTCGATCTGGGTGACATTGGCGAAATGGGCGGTGTTCG
GAATGCCGAGGCATCGCATGCCGTGCGCATGCCGCCACTCGGCGAAGTGT
CGTTGAAAAGCCTTAGGACCCTTGTAGGTGAAGTTTCCACATATCTCGCA
ATTATAGCTAATATTCAGGCCATGCAGTTTATACAACCAGTAGGGGATAG
GTTTACCGTCCCATCCGAGCGGCAAGTTCTTGGGATTGTACGGAACGTCG
TCCGCGTCGGGATCATCTTCGTTGTCCGACTCGCTGGCCTCCACATCGCT
ATCGTCCCGCTCGCCACCAGTCCGAGCCTGTTTTCTCTGCACATTCTCCT
TGGTAGCCGCTCTCTGCTCAGACAACAGATCCGCGTATTTGTAGAGCAGA
GCCTCTAGCTGGGCAATCTCCTTGTGGCGTTCGTGCTCCCGTGACTGGGC
ACTAGCAGTCTTTGCGCTGGGCTTCTTGGCCATCAGTGCGGGATCCAAGG
TGCTTTTACCTTTTGTAGAGAATAAACGCTGTGCTCGCTCCTCCAGGGTG
CCGCCGCACTTAAGACCCAGAGCCACCAAAGCCGACTTTAGACGATCCAG
TCCTAGCGAGGCCAGCTCCTCCCAGCTGGAGAAGGCGGATAGATCAAGGT
GGGCGCCGGTGTTGGCCAACGCCGACTCAGTTTCCTTAATCGAAAAACCC
GGAAATGTGCCCATCAGCCACTGGCGCTGGAAGTCAAGTTCCACCTTTAG
CAGTTCGCCCTCCAGGTCGAG
BO07086.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2925-PA | 1512 | noi-RA | 607..1509 | 921..19 | 4515 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:00:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| noi-RA | 1859 | CG2925-RA | 734..1636 | 921..19 | 4515 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:00:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5589824..5590726 | 19..921 | 4515 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:00:46 has no hits.
BO07086.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:51 Download gff for
BO07086.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-PA | 607..1512 | 18..921 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:45 Download gff for
BO07086.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2925-PA | 607..1512 | 18..921 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:41:56 Download gff for
BO07086.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 734..1636 | 19..921 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:58:19 Download gff for
BO07086.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 734..1636 | 19..921 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:58:19 Download gff for
BO07086.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5589824..5590726 | 19..921 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:41:56 Download gff for
BO07086.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1415546..1416448 | 19..921 | 100 | | Plus |
BO07086.5prime Sequence
896 bp (824 high quality bases) assembled on 2005-12-03
> BO07086.5prime
GAAGTTATCAGTCGACATGGAGACGCTCCTGGAGCAACAGCGGCGCCTAC
ACGAGGAGCGCGAGCGCCTGGTCAAACTGATGGTGGACGAGCATGCGACC
AAAAAGCCGGGCGAAAAGGAGCGCATCCATTCGGAGCACCGGCTTAAATA
CCTCATGGAACTGCATCACAACTCTACGTCCCAGCTACGCGATCTCTACG
AGGACAAGGACAATGAACGAAAGGCGGAGATTGCCGCTCTTTCGGGGCCC
AACGAGTTCAATGAGTTCTACGCCCGCCTCAAGCAAATCAAGCAGTTCTA
CAAGTCCCATCCGGCGGAGGTCAGCGTGCCGCTGTCCGTCGAGTTCGACG
AGATGATTCGGGTGTACAACAATCCGGACGACATGAGTGCCCTAGTGGAG
TTCACTGACGAGGAGGGCGGCGGTCGCTATCTGGACCTCAACGAGTGCTA
CGAGCTGTACCTCAACTTGCGGTCGGTGGAGAAACTGGACTATATCACTT
ACCTTATGTCCTTTGACCACGTCTTCGATATTCCGAGAGAGCGCAAGAAC
CGCGAGTACCGCATATACATAGAGACCCTCAACGACTACCTGCACCACTT
CATCCTCCGAATCCAGCCCTTGCTCGACCTGGAGGGCGAACTGCTAAAGG
TGGAACTTGACTTCCAGCGCCAGTGGCTGATGGGCACATTTCCGGGTTTT
TCGATTAAGGAAACTGAGTCGGCGTTGGCCAACACCGGCGCCCACCTTGA
TCTATCCGCCTTCTCCAGCTGGGAGGAGCTGGCCTCGCTAGGACTGGATC
GTCTAAAGTCGGCTTTGGTGGCTCTGGGTCTTAAGTGCGGCGGCACCCTG
NAGGAGCGAGCACAGCGTTTATTCTCTACAAAAGGTAAAGCACCTT
BO07086.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2925-PA | 1512 | noi-RA | 1..873 | 17..889 | 4346 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:09:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| noi-RA | 1859 | CG2925-RA | 127..1008 | 16..896 | 4374 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5590460..5591333 | 889..16 | 4359 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 05:09:27 has no hits.
BO07086.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:08:52 Download gff for
BO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-PA | 1..881 | 17..896 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:47:46 Download gff for
BO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2925-PA | 1..881 | 17..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:05 Download gff for
BO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 122..1008 | 10..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:34:09 Download gff for
BO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 122..1008 | 10..896 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:34:09 Download gff for
BO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5590452..5591336 | 10..896 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:05 Download gff for
BO07086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1416174..1417058 | 10..896 | 99 | | Minus |
BO07086.complete Sequence
1543 bp (1543 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630658
> BO07086.complete
GAAGTTATCAGTCGACATGGAGACGCTCCTGGAGCAACAGCGGCGCCTAC
ACGAGGAGCGCGAGCGCCTGGTCAAACTGATGGTGGACGAGCATGCGACC
AAAAAGCCGGGCGAAAAGGAGCGCATCCATTCGGAGCACCGGCTTAAATA
CCTCATGGAACTGCATCACAACTCTACGTCCCAGCTACGCGATCTCTACG
AGGACAAGGACAATGAACGAAAGGCGGAGATTGCCGCTCTTTCGGGGCCC
AACGAGTTCAATGAGTTCTACGCCCGCCTCAAGCAAATCAAGCAGTTCTA
CAAGTCCCATCCGGCGGAGGTCAGCGTGCCGCTGTCCGTCGAGTTCGACG
AGATGATTCGGGTGTACAACAATCCGGACGACATGAGTGCCCTAGTGGAG
TTCACTGACGAGGAGGGCGGCGGTCGCTATCTGGACCTCAACGAGTGCTA
CGAGCTGTACCTCAACTTGCGGTCGGTGGAGAAACTGGACTATATCACTT
ACCTTATGTCCTTTGACCACGTCTTCGATATTCCGAGAGAGCGCAAGAAC
CGCGAGTACCGCATATACATAGAGACCCTCAACGACTACCTGCACCACTT
CATCCTCCGAATCCAGCCCTTGCTCGACCTGGAGGGCGAACTGCTAAAGG
TGGAACTTGACTTCCAGCGCCAGTGGCTGATGGGCACATTTCCGGGTTTT
TCGATTAAGGAAACTGAGTCGGCGTTGGCCAACACCGGCGCCCACCTTGA
TCTATCCGCCTTCTCCAGCTGGGAGGAGCTGGCCTCGCTAGGACTGGATC
GTCTAAAGTCGGCTTTGGTGGCTCTGGGTCTTAAGTGCGGCGGCACCCTG
GAGGAGCGAGCACAGCGTTTATTCTCTACAAAAGGTAAAAGCACCTTGGA
TCCCGCACTGATGGCCAAGAAGCCCAGCGCAAAGACTGCTAGTGCCCAGT
CACGGGAGCACGAACGCCACAAGGAGATTGCCCAGCTAGAGGCTCTGCTC
TACAAATACGCGGATCTGTTGTCTGAGCAGAGAGCGGCTACCAAGGAGAA
TGTGCAGAGAAAACAGGCTCGGACTGGTGGCGAGCGGGACGATAGCGATG
TGGAGGCCAGCGAGTCGGACAACGAAGATGATCCCGACGCGGACGACGTT
CCGTACAATCCCAAGAACTTGCCGCTCGGATGGGACGGTAAACCTATCCC
CTACTGGTTGTATAAACTGCATGGCCTGAATATTAGCTATAATTGCGAGA
TATGTGGAAACTTCACCTACAAGGGTCCTAAGGCTTTTCAACGACACTTC
GCCGAGTGGCGGCATGCGCACGGCATGCGATGCCTCGGCATTCCGAACAC
CGCCCATTTCGCCAATGTCACCCAGATCGAGGACGCAATCACGTTGTGGG
AAAAACTCAAGTCGCAAAAGCAGAGCGAGCGCTGGGTAGCCGATCAGGAG
GAAGAGTTCGAGGACTCGCTGGGAAACGTTGTCAACCGAAAGACGTTCGA
GGATCTAAAACGCCAGGGTCTACTTGCAAGCTTTCTAGACCAT
BO07086.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:35:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| noi-RA | 1512 | CG2925-PA | 1..1509 | 17..1525 | 7545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| noi-RA | 1859 | CG2925-RA | 127..1636 | 16..1525 | 7550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:35:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5589824..5591333 | 1525..16 | 7550 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:35:20 has no hits.
BO07086.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:27 Download gff for
BO07086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 1..1512 | 17..1526 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:59 Download gff for
BO07086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 121..1635 | 10..1525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:20 Download gff for
BO07086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 128..1636 | 17..1527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:27 Download gff for
BO07086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 121..1635 | 10..1525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:16 Download gff for
BO07086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 128..1636 | 17..1527 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:16 Download gff for
BO07086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5589822..5591332 | 17..1527 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:20 Download gff for
BO07086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1415544..1417054 | 17..1527 | 99 | | Minus |
BO07086.pep Sequence
Translation from 16 to 1543
> BO07086.pep
METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELH
HNSTSQLRDLYEDKDNERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPA
EVSVPLSVEFDEMIRVYNNPDDMSALVEFTDEEGGGRYLDLNECYELYLN
LRSVEKLDYITYLMSFDHVFDIPRERKNREYRIYIETLNDYLHHFILRIQ
PLLDLEGELLKVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFS
SWEELASLGLDRLKSALVALGLKCGGTLEERAQRLFSTKGKSTLDPALMA
KKPSAKTASAQSREHERHKEIAQLEALLYKYADLLSEQRAATKENVQRKQ
ARTGGERDDSDVEASESDNEDDPDADDVPYNPKNLPLGWDGKPIPYWLYK
LHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFAN
VTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQ
GLLASFLDH
BO07086.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| noi-PA | 503 | CG2925-PA | 1..503 | 1..503 | 2643 | 100 | Plus |
