Clone BO07105 Report

Search the DGRC for BO07105

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:71
Well:5
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO07105.pep: validated not full length
Sequenced Size:655

Clone Sequence Records

BO07105.3prime Sequence

653 bp (652 high quality bases) assembled on 2005-12-04

> BO07105.3prime
ATGGTCTAGAAAGCTTGCATGTGCACTGTTATTTTGATTTTGATTACATC
TTTGTTCGTTAAGTATTTGTGTAATCTCCTCAGCCAATTGGGTAAATAGA
TAAGAGTACTTGCTGTCCGGATATTTTATTACAACAGGCACTCCACTCTC
GTTGCTATCCGCTATTCGTGAGTCTAACGGAAGAGAAATTAGCTTGCGCG
GTAGAGAACTTATACGGCTGTCTTTAAAAAACTCCAATCGTTGATTACAG
TTCTGACAAATGGTGTACTTCATGTTCTCTACTACGCCAAAGATAGGAAC
ATTTAACTTTTCGTACATGCTTGCACCTTTCAAGGTCACCTGAACAGCTG
CAGTATGAGGTGTTGTTACCAGGATAACCCCTGTGATAGGTGCATGCTGG
GATAGTGAGAGATGTACATCTCCAGTGCCCGGTGGAGTATCTATAACTAG
GACATCTAGAAGCCCCCAATCAGTACCTTTTAGCAGTCGTTGTATTGCTG
ACATTACAAGAGGACCTCGCCAGATAACAGAGGTCTCTACAGGTGTCAGC
ATGCCCATAGACAAGCACTTTACATTGTAGTTTTGCGGCGGGATCATCAA
ATTCTTATCGTTCACAACCGGCTCACCATGGACATTCATGTCGACTGATA
ACT

BO07105.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-PA 894 CG3262-RA 270..891 640..19 3110 100 Minus
CG3262-PB 624 CG3262-RB 1..621 639..19 3105 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-RF 900 CG3262-RF 258..879 640..19 3110 100 Minus
CG3262-RE 7023 CG3262-RE 274..895 640..19 3110 100 Minus
CG3262-RD 1013 CG3262-RD 274..895 640..19 3110 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22240239..22240860 640..19 3110 100 Minus
Blast to na_te.dros performed 2015-02-11 23:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
transib3 2883 transib3 TRANSIB3 2883bp 1498..1536 450..488 114 76.9 Plus

BO07105.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:19 Download gff for BO07105.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-PA 255..882 15..644 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:21 Download gff for BO07105.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-PA 267..894 15..644 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:46:36 Download gff for BO07105.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 271..898 15..644 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:50:16 Download gff for BO07105.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 271..898 15..644 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:50:16 Download gff for BO07105.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 22240236..22240868 13..644 98 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:46:36 Download gff for BO07105.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22240236..22240868 13..644 98 <- Minus

BO07105.5prime Sequence

653 bp (652 high quality bases) assembled on 2005-12-03

> BO07105.5prime
GAAGTTATCAGTCGACATGAATGTCCATGGTGAGCCGGTTGTGAACGATA
AGAATTTGATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATG
GGCATGCTGACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGT
AATGTCAGCAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAG
ATGTCCTAGTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCA
CTATCCCAGCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCA
TACTGCAGCTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGT
TAAATGTTCCTATCTTTGGCGTAGTAGAGAACATGAAGTACACCATTTGT
CAGAACTGTAATCAACGATTGGAGTTTTTTAAAGACAGCCGTATAAGTTC
TCTACCGCGCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATA
GCAACGAGAGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTAC
TCTTATCTATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGA
ACAAAGATGTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAG
ACC

BO07105.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-PA 894 CG3262-RA 270..891 16..637 3110 100 Plus
CG3262-PB 624 CG3262-RB 1..621 17..637 3105 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:27:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-RF 900 CG3262-RF 258..879 16..637 3110 100 Plus
CG3262-RE 7023 CG3262-RE 274..895 16..637 3110 100 Plus
CG3262-RD 1013 CG3262-RD 274..895 16..637 3110 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:27:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22240239..22240860 16..637 3110 100 Plus
Blast to na_te.dros performed 2015-02-13 05:27:02
Subject Length Description Subject Range Query Range Score Percent Strand
transib3 2883 transib3 TRANSIB3 2883bp 1498..1536 206..168 114 76.9 Minus

BO07105.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:19 Download gff for BO07105.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-PA 255..882 12..641 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:22 Download gff for BO07105.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-PA 267..894 12..641 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:02:28 Download gff for BO07105.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 271..898 12..641 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:58:02 Download gff for BO07105.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 271..898 12..641 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:58:02 Download gff for BO07105.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 22240236..22240863 12..641 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:02:28 Download gff for BO07105.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22240236..22240863 12..641 99   Plus

BO07105.complete Sequence

655 bp (655 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630663

> BO07105.complete
GAAGTTATCAGTCGACATGAATGTCCATGGTGAGCCGGTTGTGAACGATA
AGAATTTGATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATG
GGCATGCTGACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGT
AATGTCAGCAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAG
ATGTCCTAGTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCA
CTATCCCAGCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCA
TACTGCAGCTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGT
TAAATGTTCCTATCTTTGGCGTAGTAGAGAACATGAAGTACACCATTTGT
CAGAACTGTAATCAACGATTGGAGTTTTTTAAAGACAGCCGTATAAGTTC
TCTACCGCGCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATA
GCAACGAGAGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTAC
TCTTATCTATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGA
ACAAAGATGTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAG
ACCAT

BO07105.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:38:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-RE 882 CG3262-PE 258..879 16..637 3110 100 Plus
CG3262-RD 882 CG3262-PD 258..879 16..637 3110 100 Plus
CG3262-RF 624 CG3262-PF 1..621 17..637 3105 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:38:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-RF 900 CG3262-RF 258..879 16..637 3110 100 Plus
CG3262-RE 7023 CG3262-RE 274..895 16..637 3110 100 Plus
CG3262-RD 1013 CG3262-RD 274..895 16..637 3110 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:38:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22240239..22240860 16..637 3110 100 Plus
Blast to na_te.dros performed 2014-11-28 08:38:52
Subject Length Description Subject Range Query Range Score Percent Strand
transib3 2883 transib3 TRANSIB3 2883bp 1498..1536 206..168 114 76.9 Minus

BO07105.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:55:24 Download gff for BO07105.complete
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 255..882 12..641 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:02:16 Download gff for BO07105.complete
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 285..905 17..639 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:59 Download gff for BO07105.complete
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 275..895 17..639 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:55:25 Download gff for BO07105.complete
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 281..908 12..641 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:14 Download gff for BO07105.complete
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 275..895 17..639 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:14 Download gff for BO07105.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22240240..22240860 17..639 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:59 Download gff for BO07105.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22240240..22240860 17..639 99   Plus

BO07105.pep Sequence

Translation from 16 to 655

> BO07105.pep
MNVHGEPVVNDKNLMIPPQNYNVKCLSMGMLTPVETSVIWRGPLVMSAIQ
RLLKGTDWGLLDVLVIDTPPGTGDVHLSLSQHAPITGVILVTTPHTAAVQ
VTLKGASMYEKLNVPIFGVVENMKYTICQNCNQRLEFFKDSRISSLPRKL
ISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEITQILNEQRCNQ
NQNNSAHASFLDH

BO07105.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:24:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-PF 207 CG3262-PF 1..207 1..207 1077 100 Plus
CG3262-PE 293 CG3262-PE 87..293 1..207 1077 100 Plus
CG3262-PD 293 CG3262-PD 87..293 1..207 1077 100 Plus
CG17904-PA 311 CG17904-PA 127..285 22..166 229 35.8 Plus
CG4858-PA 260 CG4858-PA 75..258 19..193 224 31 Plus