Clone Sequence Records
BO07105.3prime Sequence
653 bp (652 high quality bases) assembled on 2005-12-04
> BO07105.3prime
ATGGTCTAGAAAGCTTGCATGTGCACTGTTATTTTGATTTTGATTACATC
TTTGTTCGTTAAGTATTTGTGTAATCTCCTCAGCCAATTGGGTAAATAGA
TAAGAGTACTTGCTGTCCGGATATTTTATTACAACAGGCACTCCACTCTC
GTTGCTATCCGCTATTCGTGAGTCTAACGGAAGAGAAATTAGCTTGCGCG
GTAGAGAACTTATACGGCTGTCTTTAAAAAACTCCAATCGTTGATTACAG
TTCTGACAAATGGTGTACTTCATGTTCTCTACTACGCCAAAGATAGGAAC
ATTTAACTTTTCGTACATGCTTGCACCTTTCAAGGTCACCTGAACAGCTG
CAGTATGAGGTGTTGTTACCAGGATAACCCCTGTGATAGGTGCATGCTGG
GATAGTGAGAGATGTACATCTCCAGTGCCCGGTGGAGTATCTATAACTAG
GACATCTAGAAGCCCCCAATCAGTACCTTTTAGCAGTCGTTGTATTGCTG
ACATTACAAGAGGACCTCGCCAGATAACAGAGGTCTCTACAGGTGTCAGC
ATGCCCATAGACAAGCACTTTACATTGTAGTTTTGCGGCGGGATCATCAA
ATTCTTATCGTTCACAACCGGCTCACCATGGACATTCATGTCGACTGATA
ACT
BO07105.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-PA | 894 | CG3262-RA | 270..891 | 640..19 | 3110 | 100 | Minus |
CG3262-PB | 624 | CG3262-RB | 1..621 | 639..19 | 3105 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:17:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-RF | 900 | CG3262-RF | 258..879 | 640..19 | 3110 | 100 | Minus |
CG3262-RE | 7023 | CG3262-RE | 274..895 | 640..19 | 3110 | 100 | Minus |
CG3262-RD | 1013 | CG3262-RD | 274..895 | 640..19 | 3110 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:17:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22240239..22240860 | 640..19 | 3110 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 23:17:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib3 | 2883 | transib3 TRANSIB3 2883bp | 1498..1536 | 450..488 | 114 | 76.9 | Plus |
BO07105.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:19 Download gff for
BO07105.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-PA | 255..882 | 15..644 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:21 Download gff for
BO07105.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-PA | 267..894 | 15..644 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:46:36 Download gff for
BO07105.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 271..898 | 15..644 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:50:16 Download gff for
BO07105.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 271..898 | 15..644 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:50:16 Download gff for
BO07105.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22240236..22240868 | 13..644 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:46:36 Download gff for
BO07105.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22240236..22240868 | 13..644 | 98 | <- | Minus |
BO07105.5prime Sequence
653 bp (652 high quality bases) assembled on 2005-12-03
> BO07105.5prime
GAAGTTATCAGTCGACATGAATGTCCATGGTGAGCCGGTTGTGAACGATA
AGAATTTGATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATG
GGCATGCTGACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGT
AATGTCAGCAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAG
ATGTCCTAGTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCA
CTATCCCAGCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCA
TACTGCAGCTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGT
TAAATGTTCCTATCTTTGGCGTAGTAGAGAACATGAAGTACACCATTTGT
CAGAACTGTAATCAACGATTGGAGTTTTTTAAAGACAGCCGTATAAGTTC
TCTACCGCGCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATA
GCAACGAGAGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTAC
TCTTATCTATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGA
ACAAAGATGTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAG
ACC
BO07105.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-PA | 894 | CG3262-RA | 270..891 | 16..637 | 3110 | 100 | Plus |
CG3262-PB | 624 | CG3262-RB | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:27:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-RF | 900 | CG3262-RF | 258..879 | 16..637 | 3110 | 100 | Plus |
CG3262-RE | 7023 | CG3262-RE | 274..895 | 16..637 | 3110 | 100 | Plus |
CG3262-RD | 1013 | CG3262-RD | 274..895 | 16..637 | 3110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:27:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22240239..22240860 | 16..637 | 3110 | 100 | Plus |
Blast to na_te.dros performed 2015-02-13 05:27:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib3 | 2883 | transib3 TRANSIB3 2883bp | 1498..1536 | 206..168 | 114 | 76.9 | Minus |
BO07105.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:19 Download gff for
BO07105.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-PA | 255..882 | 12..641 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:22 Download gff for
BO07105.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-PA | 267..894 | 12..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:02:28 Download gff for
BO07105.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 271..898 | 12..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:58:02 Download gff for
BO07105.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 271..898 | 12..641 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:58:02 Download gff for
BO07105.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22240236..22240863 | 12..641 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:02:28 Download gff for
BO07105.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22240236..22240863 | 12..641 | 99 | | Plus |
BO07105.complete Sequence
655 bp (655 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630663
> BO07105.complete
GAAGTTATCAGTCGACATGAATGTCCATGGTGAGCCGGTTGTGAACGATA
AGAATTTGATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATG
GGCATGCTGACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGT
AATGTCAGCAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAG
ATGTCCTAGTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCA
CTATCCCAGCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCA
TACTGCAGCTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGT
TAAATGTTCCTATCTTTGGCGTAGTAGAGAACATGAAGTACACCATTTGT
CAGAACTGTAATCAACGATTGGAGTTTTTTAAAGACAGCCGTATAAGTTC
TCTACCGCGCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATA
GCAACGAGAGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTAC
TCTTATCTATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGA
ACAAAGATGTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAG
ACCAT
BO07105.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:38:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-RE | 882 | CG3262-PE | 258..879 | 16..637 | 3110 | 100 | Plus |
CG3262-RD | 882 | CG3262-PD | 258..879 | 16..637 | 3110 | 100 | Plus |
CG3262-RF | 624 | CG3262-PF | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:38:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-RF | 900 | CG3262-RF | 258..879 | 16..637 | 3110 | 100 | Plus |
CG3262-RE | 7023 | CG3262-RE | 274..895 | 16..637 | 3110 | 100 | Plus |
CG3262-RD | 1013 | CG3262-RD | 274..895 | 16..637 | 3110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:38:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22240239..22240860 | 16..637 | 3110 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 08:38:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib3 | 2883 | transib3 TRANSIB3 2883bp | 1498..1536 | 206..168 | 114 | 76.9 | Minus |
BO07105.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:55:24 Download gff for
BO07105.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 255..882 | 12..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:02:16 Download gff for
BO07105.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 285..905 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:59 Download gff for
BO07105.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 275..895 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:55:25 Download gff for
BO07105.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 281..908 | 12..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:14 Download gff for
BO07105.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 275..895 | 17..639 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:14 Download gff for
BO07105.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22240240..22240860 | 17..639 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:59 Download gff for
BO07105.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22240240..22240860 | 17..639 | 99 | | Plus |
BO07105.pep Sequence
Translation from 16 to 655
> BO07105.pep
MNVHGEPVVNDKNLMIPPQNYNVKCLSMGMLTPVETSVIWRGPLVMSAIQ
RLLKGTDWGLLDVLVIDTPPGTGDVHLSLSQHAPITGVILVTTPHTAAVQ
VTLKGASMYEKLNVPIFGVVENMKYTICQNCNQRLEFFKDSRISSLPRKL
ISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEITQILNEQRCNQ
NQNNSAHASFLDH
BO07105.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:24:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-PF | 207 | CG3262-PF | 1..207 | 1..207 | 1077 | 100 | Plus |
CG3262-PE | 293 | CG3262-PE | 87..293 | 1..207 | 1077 | 100 | Plus |
CG3262-PD | 293 | CG3262-PD | 87..293 | 1..207 | 1077 | 100 | Plus |
CG17904-PA | 311 | CG17904-PA | 127..285 | 22..166 | 229 | 35.8 | Plus |
CG4858-PA | 260 | CG4858-PA | 75..258 | 19..193 | 224 | 31 | Plus |