Clone Sequence Records
BO07106.3prime Sequence
942 bp (773 high quality bases) assembled on 2005-12-04
> BO07106.3prime
ATGGTCTAGAAAGCTTGCATTATTGCTTTCCAGCACTTTTATTAGGTCGT
AAGCATGTTGGAAACGCATATCACAGAAGTCATCTTGGCATGCTACACAC
TGCTCCAGGAGCAGCTGCAGCTTTTCGTTGTCCAAATTCTTAAGCAAGTA
ATCCCTTAGCAAAAGGCACGCCTGGTAGATATTGGCATCCAGCTGATGGC
CGGAGCAGAATGCAGAGACATCAAATGTGAATCCCTCGCCGGTCAGCGGC
TCGTACTTTTCGGCATGTCCTGCTGCGAACGAAGCGTCCACCAGGACCAC
GGAGTCCAAATCAATGAGGTACACCTTCTTGGTGTCTTCGTCGTAAGCCA
AATTATCGGCCGTGAAATCGGTTAAGATAATGCGAAAGTCCGCGAATCCA
AAAGTCAGCTTGAGGGAGAGCTGGATCAACTGGAGAGCCAGCTCCACACG
CAAACCTTCTTCAGCATCGACGTAATGAGCTAAAGTACGTCCTGCATTGG
ATTGAAAATGTGTTAGTCCGCAGGAGGCGTAGGTGGTAGGCACTGGAAAT
CCCTGCAGATGCAGTTCCTGCATAAGCAGCGGACTAACGTAGTACATCAT
GTAGAACCACACACTGGCGGCAGCATGTCCACGCTGCTCCAAGTACGAAA
CAAAGCGGGGTTCCCTTGCCAGAGTTCGGCAGAGATGAAAACCACCAGGT
CGCTCCTCTAGTTCATAGAAATCTTTTTTCACATTTTTTATCTGATTACT
CTGTGCATCAATGATTTTTCTTTTGGCCACCAGCTGGACTTCCTGATCCC
GGTCTTTTAGCCTTAGAAAGTAAATCGCTCGGCGATCAACGAGCAACGAA
ATGGCTTTCACAAGTCTACTCCAATCCGAGGGCTCTGCAATTTTCTGGAG
ATTTCCCCGCACGGCTCACTCTGTCCAACGAAACAGTCTGGA
BO07106.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-PB | 1047 | CG11170-RB | 164..1044 | 899..19 | 4405 | 100 | Minus |
| CG11170-PB | 1047 | CG11170-RB | 120..163 | 942..899 | 220 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:29:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-RD | 1106 | CG11170-RD | 157..1081 | 942..19 | 4600 | 99.9 | Minus |
| CG11170-RC | 1135 | CG11170-RC | 186..1110 | 942..19 | 4600 | 99.9 | Minus |
| CG11170-RB | 1195 | CG11170-RB | 246..1170 | 942..19 | 4600 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:29:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22177444..22178368 | 19..942 | 4575 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-11 03:29:34 has no hits.
BO07106.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:20 Download gff for
BO07106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-PB | 121..1047 | 15..941 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:23 Download gff for
BO07106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-PB | 121..1047 | 15..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:54:42 Download gff for
BO07106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 247..1176 | 13..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:05:57 Download gff for
BO07106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 247..1176 | 13..941 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:05:57 Download gff for
BO07106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22177438..22178367 | 13..941 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:54:42 Download gff for
BO07106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18064943..18065872 | 13..941 | 99 | | Plus |
BO07106.5prime Sequence
891 bp (850 high quality bases) assembled on 2005-12-03
> BO07106.5prime
GAAGTTATCAGTCGACATGCACCTGTCACACGGCCAACTGAAAGTGGTGC
TCATTTTGGCCCTGCTGCAGGAGCTGCAGGTGAAGCCGCAGCGAGAGGTG
TTCCAGGAACTTTTCGAGAAGGATCTGCGCTTGTGTCCAGACTGTTTCGT
TGGACAGAGTGAGCCGTGCGGGGAAATCTTCCAGAAAATTGCAGAGCCCT
CGGATTGGAGTAGACTTGTGAAAGCCATTTCGTTGCTCGTTGATCGCCGA
GCGATTTACTTTCTAAGGCTAAAAGACCGGGATCAGGAAGTCCAGCTGGT
GGCCAAAAGAAAAATCATTGATGCACAGAGTAATCAGATAAAAAATGTGA
AAAAAGATTTCTATGAACTAGAGGAGCGACCTGGTGGTTTTCATCTCTGC
CGAACTCTGGCAAGGGAACCCCGCTTTGTTTCGTACTTGGAGCAGCGTGG
ACATGCTGCCGCCAGTGTGTGGTTCTACATGATGTACTACGTTAGTCCGC
TGCTTATGCAGGAACTGCATCTGCAGGGATTTCCAGTGCCTACCACCTAC
GCCTCCTGCGGACTAACACATTTTCAATCCAATGCAGGACGTACTTTAGC
TCATTACGTCGATGCTGAAGAAGGTTTGCGTGTGGAGCTGGCTCTCCAGT
TGATCCAGCTCTCCCTCAAGCTGACTTTTGGATTCGCGGACTTTCGCATT
ATCTTAACCGATTTCACGGCCGATAATTTGGCTTACGACGAAGACACCAA
GAAGGTGTACCTCATTGATTTGGACTCCGTGGTCCTGGTGGACGCTTCGT
TCGCAGCANGACATGCCGAAAAGTACGAGCCGCTGACCGGCGAGGGATCA
CATTTGATGTCTCTGCATTCTGCTCCGGCCATCAGCTGGAT
BO07106.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-PB | 1047 | CG11170-RB | 1..832 | 17..848 | 4141 | 99.8 | Plus |
| CG11170-PB | 1047 | CG11170-RB | 833..876 | 848..891 | 220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:01:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-RD | 1106 | CG11170-RD | 38..913 | 17..891 | 4344 | 99.8 | Plus |
| CG11170-RC | 1135 | CG11170-RC | 67..942 | 17..891 | 4344 | 99.8 | Plus |
| CG11170-RB | 1195 | CG11170-RB | 127..1002 | 17..891 | 4344 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:01:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22177612..22178487 | 891..17 | 4319 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:01:30 has no hits.
BO07106.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:21 Download gff for
BO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-PB | 1..876 | 17..891 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:25 Download gff for
BO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-PB | 1..876 | 17..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:41:59 Download gff for
BO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 124..1002 | 11..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:59:48 Download gff for
BO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 124..1002 | 11..891 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:59:48 Download gff for
BO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22177612..22178490 | 11..891 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:41:59 Download gff for
BO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18065117..18065995 | 11..891 | 99 | | Minus |
BO07106.complete Sequence
1078 bp (1078 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630664
> BO07106.complete
GAAGTTATCAGTCGACATGCACCTGTCACACGGCCAACTGAAAGTGGTGC
TCATTTTGGCCCTGCTGCAGGAGCTGCAGGTGAAGCCGCAGCGAGAGGTG
TTCCAGGAACTTTTCGAGAAGGATCTGCGCTTGTGTCCAGACTGTTTCGT
TGGACAGAGTGAGCCGTGCGGGGAAATCTTCCAGAAAATTGCAGAGCCCT
CGGATTGGAGTAGACTTGTGAAAGCCATTTCGTTGCTCGTTGATCGCCGA
GCGATTTACTTTCTAAGGCTAAAAGACCGGGATCAGGAAGTCCAGCTGGT
GGCCAAAAGAAAAATCATTGATGCACAGAGTAATCAGATAAAAAATGTGA
AAAAAGATTTCTATGAACTAGAGGAGCGACCTGGTGGTTTTCATCTCTGC
CGAACTCTGGCAAGGGAACCCCGCTTTGTTTCGTACTTGGAGCAGCGTGG
ACATGCTGCCGCCAGTGTGTGGTTCTACATGATGTACTACGTTAGTCCGC
TGCTTATGCAGGAACTGCATCTGCAGGGATTTCCAGTGCCTACCACCTAC
GCCTCCTGCGGACTAACACATTTTCAATCCAATGCAGGACGTACTTTAGC
TCATTACGTCGATGCTGAAGAAGGTTTGCGTGTGGAGCTGGCTCTCCAGT
TGATCCAGCTCTCCCTCAAGCTGACTTTTGGATTCGCGGACTTTCGCATT
ATCTTAACCGATTTCACGGCCGATAATTTGGCTTACGACGAAGACACCAA
GAAGGTGTACCTCATTGATTTGGACTCCGTGGTCCTGGTGGACGCTTCGT
TCGCAGCAGGACATGCCGAAAAGTACGAGCCGCTGACCGGCGAGGGATTC
ACATTTGATGTCTCTGCATTCTGCTCCGGCCATCAGCTGGATGCCAATAT
CTACCAGGCGTGCCTTTTGCTAAGGGATTACTTGCTTAAGAATTTGGACA
ACGAAAAGCTGCAGCTGCTCCTGGAGCAGTGTGTAGCATGCCAAGATGAC
TTCTGTGATATGCGTTTCCAACATGCTTACGACCTAATAAAAGTGCTGGA
AAGCAATAATGCAAGCTTTCTAGACCAT
BO07106.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:54:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-RD | 1047 | CG11170-PD | 1..1044 | 17..1060 | 5220 | 100 | Plus |
| CG11170-RC | 1047 | CG11170-PC | 1..1044 | 17..1060 | 5220 | 100 | Plus |
| CG11170-RB | 1047 | CG11170-PB | 1..1044 | 17..1060 | 5220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:54:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-RD | 1106 | CG11170-RD | 38..1081 | 17..1060 | 5220 | 100 | Plus |
| CG11170-RC | 1135 | CG11170-RC | 67..1110 | 17..1060 | 5220 | 100 | Plus |
| CG11170-RB | 1195 | CG11170-RB | 127..1170 | 17..1060 | 5220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:54:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22177444..22178487 | 1060..17 | 5220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:54:44 has no hits.
BO07106.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:19 Download gff for
BO07106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 1..1047 | 17..1064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:49 Download gff for
BO07106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 77..1126 | 11..1064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:40 Download gff for
BO07106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 127..1170 | 17..1062 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:19 Download gff for
BO07106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 77..1126 | 11..1064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:57:50 Download gff for
BO07106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 127..1170 | 17..1062 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:57:50 Download gff for
BO07106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22177442..22178487 | 17..1062 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:40 Download gff for
BO07106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18064947..18065992 | 17..1062 | 99 | | Minus |
BO07106.pep Sequence
Translation from 16 to 1078
> BO07106.pep
MHLSHGQLKVVLILALLQELQVKPQREVFQELFEKDLRLCPDCFVGQSEP
CGEIFQKIAEPSDWSRLVKAISLLVDRRAIYFLRLKDRDQEVQLVAKRKI
IDAQSNQIKNVKKDFYELEERPGGFHLCRTLAREPRFVSYLEQRGHAAAS
VWFYMMYYVSPLLMQELHLQGFPVPTTYASCGLTHFQSNAGRTLAHYVDA
EEGLRVELALQLIQLSLKLTFGFADFRIILTDFTADNLAYDEDTKKVYLI
DLDSVVLVDASFAAGHAEKYEPLTGEGFTFDVSAFCSGHQLDANIYQACL
LLRDYLLKNLDNEKLQLLLEQCVACQDDFCDMRFQHAYDLIKVLESNNAS
FLDH
BO07106.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-PD | 348 | CG11170-PD | 1..348 | 1..348 | 1807 | 100 | Plus |
| CG11170-PC | 348 | CG11170-PC | 1..348 | 1..348 | 1807 | 100 | Plus |
| CG11170-PB | 348 | CG11170-PB | 1..348 | 1..348 | 1807 | 100 | Plus |
