Clone Sequence Records
BO07107.3prime Sequence
851 bp (762 high quality bases) assembled on 2005-12-04
> BO07107.3prime
ATGGTCTAGAAAGCTTGCAACGGCTTTTTGGGCATCGGGACTCGTCGTTG
AACTCTGAGGCAATAGGTTCTGCTCGGAGGACGCAACTAACTTCTCCTCC
AGTGGGAGGTGAACGCCGAAATCGTGCTTCATGTAGGACATGAGCACATT
GTAAACAGCCGTGCACACATTGACGAACGTCACCCGGTATTTGGTGTCTA
AATAGCGAAAGTTCAGGTACTGCGCCGCCGGCCAGGTCATCCAATCCAGC
ATGTAAACATACGGGAACTTGGAGATCAGCTCCTGATTGGTGGCGTCCAG
GGTCTGGCGCTCCAGATAGCAAAGCGAATAGAAGAATATGACGATGCAGG
CGGGCGACATGACCAGCTGGTCAATCAGGATCTTCTTGAAGATGTTCTTT
AGCGTACGAGCCGGCATTACCCTGTCCATCCAGTTGTACACGTAGTGGTG
AAGAGGTCCCTGCAGCGCGCCAGCCACAAACATCCGGTACATGCGATCCG
TATCGAAGCGGTCCTGGTGCCGCAATCCACGCCTGTACTCGTACTCCTGG
GCTATCACATCGCCCACGACCATCAGCAGTCCGGAGCCCACCACGTTCGT
AACGAGCAGATACTTGCCGAACATGTTGCTCCACGCGATCTTAGTCCATC
GCAGCAGTATGAAACTAAGCGCTCCACCCTCCGTTTCCCCCTTGCCATGG
GTAAAACGAAGTCCGTACTTTTGGTATCCCACACCATGGCTTCTCATCCG
GCACAGAGCCGCAAAATCTCTGCGGGAATTGTGGGAGCCATGGATTCGGA
GACTGTAGCACTGGCGCAGGCAACGAGTGCCAAACATGTCGACTGATAAC
T
BO07107.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-PA | 822 | CG32262-RA | 1..819 | 837..19 | 4095 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:27:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-RA | 1051 | CG32262-RA | 100..918 | 837..19 | 4095 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:26:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3809279..3810097 | 19..837 | 4095 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:27:01 has no hits.
BO07107.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:22 Download gff for
BO07107.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-PA | 1..822 | 15..837 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:26 Download gff for
BO07107.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-PA | 1..822 | 15..837 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:07:53 Download gff for
BO07107.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 100..922 | 14..837 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:19:25 Download gff for
BO07107.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 100..922 | 14..837 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:19:25 Download gff for
BO07107.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3809275..3810097 | 14..837 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:07:53 Download gff for
BO07107.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3809275..3810097 | 14..837 | 99 | | Plus |
BO07107.5prime Sequence
851 bp (796 high quality bases) assembled on 2005-12-03
> BO07107.5prime
GAAGTTATCAGTCGACATGTTTGGCACTCGTTGCCTGCGCCAGTGCTACA
GTCTCCGAATCCATGGCTCCCACAATTCCCGCAGAGATTTTGCGGCTCTG
TGCCGGATGAGAAGCCATGGTGTGGGATACCAAAAGTACGGACTTCGTTT
TACCCATGGCAAGGGGGAAACGGAGGGTGGAGCGCTTAGTTTCATACTGC
TGCGATGGACTAAGATCGCGTGGAGCAACATGTTCGGCAAGTATCTGCTC
GTTACGAACGTGGTGGGCTCCGGACTGCTGATGGTCGTGGGCGATGTGAT
AGCCCAGGAGTACGAGTACAGGCGTGGATTGCGGCACCAGGACCGCTTCG
ATACGGATCGCATGTACCGGATGTTTGTGGCTGGCGCGCTGCAGGGACCT
CTTCACCACTACGTGTACAACTGGATGGACAGGGTAATGCCGGCTCGTAC
GCTAAAGAACATCTTCAAGAAGATCCTGATTGACCAGCTGGTCATGTCGC
CCGCCTGCATCGTCATATTCTTCTATTCGCTTTGCTATCTGGAGCGCCAG
ACCCTGGACGCCACCAATCAGGAGCTGATCTCCAAGTTCCCGTATGTTTA
CATGCTGGATTGGATGACCTGGCCGGCGGCGCAGTACCTGAACTTTCGCT
ATTTAGACACCAAATACCGGGTGACGTTCGTCAATGTGTGCACGGCTGTT
TACAATGTGCTCATGTCCTACATGAAGCACGATTTCGGCGTTCACCTCCC
ACTGGAGGAGAAGTTAGTTGCGTCCTCCGAGCAGAACCTATTGCCTCAGA
GTTCAACGACGAGTCCCGATGCCCAAAAAGCCGTTGCAAGCTTTCTAGAC
C
BO07107.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-PA | 822 | CG32262-RA | 1..819 | 17..835 | 4095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:03:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-RA | 1051 | CG32262-RA | 100..918 | 17..835 | 4095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:03:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3809279..3810097 | 835..17 | 4095 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:03:18 has no hits.
BO07107.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:24 Download gff for
BO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-PA | 1..822 | 17..839 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:28 Download gff for
BO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-PA | 1..822 | 17..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:04:30 Download gff for
BO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 100..922 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:34:33 Download gff for
BO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 100..922 | 17..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:34:33 Download gff for
BO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3809275..3810097 | 17..840 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:04:30 Download gff for
BO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3809275..3810097 | 17..840 | 99 | | Minus |
BO07107.complete Sequence
853 bp (853 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630665
> BO07107.complete
GAAGTTATCAGTCGACATGTTTGGCACTCGTTGCCTGCGCCAGTGCTACA
GTCTCCGAATCCATGGCTCCCACAATTCCCGCAGAGATTTTGCGGCTCTG
TGCCGGATGAGAAGCCATGGTGTGGGATACCAAAAGTACGGACTTCGTTT
TACCCATGGCAAGGGGGAAACGGAGGGTGGAGCGCTTAGTTTCATACTGC
TGCGATGGACTAAGATCGCGTGGAGCAACATGTTCGGCAAGTATCTGCTC
GTTACGAACGTGGTGGGCTCCGGACTGCTGATGGTCGTGGGCGATGTGAT
AGCCCAGGAGTACGAGTACAGGCGTGGATTGCGGCACCAGGACCGCTTCG
ATACGGATCGCATGTACCGGATGTTTGTGGCTGGCGCGCTGCAGGGACCT
CTTCACCACTACGTGTACAACTGGATGGACAGGGTAATGCCGGCTCGTAC
GCTAAAGAACATCTTCAAGAAGATCCTGATTGACCAGCTGGTCATGTCGC
CCGCCTGCATCGTCATATTCTTCTATTCGCTTTGCTATCTGGAGCGCCAG
ACCCTGGACGCCACCAATCAGGAGCTGATCTCCAAGTTCCCGTATGTTTA
CATGCTGGATTGGATGACCTGGCCGGCGGCGCAGTACCTGAACTTTCGCT
ATTTAGACACCAAATACCGGGTGACGTTCGTCAATGTGTGCACGGCTGTT
TACAATGTGCTCATGTCCTACATGAAGCACGATTTCGGCGTTCACCTCCC
ACTGGAGGAGAAGTTAGTTGCGTCCTCCGAGCAGAACCTATTGCCTCAGA
GTTCAACGACGAGTCCCGATGCCCAAAAAGCCGTTGCAAGCTTTCTAGAC
CAT
BO07107.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:50:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-RA | 822 | CG32262-PA | 1..819 | 17..835 | 4095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:50:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-RA | 1051 | CG32262-RA | 100..918 | 17..835 | 4095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3809279..3810097 | 835..17 | 4095 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:50:57 has no hits.
BO07107.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:20 Download gff for
BO07107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 1..822 | 17..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:51 Download gff for
BO07107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 85..907 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:46:30 Download gff for
BO07107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 106..918 | 23..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:20 Download gff for
BO07107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 85..907 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:06:01 Download gff for
BO07107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 106..918 | 23..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:06:01 Download gff for
BO07107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3809277..3810091 | 23..837 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:46:30 Download gff for
BO07107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3809277..3810091 | 23..837 | 99 | | Minus |
BO07107.pep Sequence
Translation from 16 to 853
> BO07107.pep
MFGTRCLRQCYSLRIHGSHNSRRDFAALCRMRSHGVGYQKYGLRFTHGKG
ETEGGALSFILLRWTKIAWSNMFGKYLLVTNVVGSGLLMVVGDVIAQEYE
YRRGLRHQDRFDTDRMYRMFVAGALQGPLHHYVYNWMDRVMPARTLKNIF
KKILIDQLVMSPACIVIFFYSLCYLERQTLDATNQELISKFPYVYMLDWM
TWPAAQYLNFRYLDTKYRVTFVNVCTAVYNVLMSYMKHDFGVHLPLEEKL
VASSEQNLLPQSSTTSPDAQKAVASFLDH
BO07107.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-PA | 273 | CG32262-PA | 1..273 | 1..273 | 1458 | 100 | Plus |
| CG32263-PA | 206 | CG32263-PA | 33..206 | 69..245 | 400 | 46.3 | Plus |
| CG1662-PB | 245 | CG1662-PB | 62..234 | 61..238 | 299 | 38.2 | Plus |
| CG1662-PA | 245 | CG1662-PA | 62..234 | 61..238 | 299 | 38.2 | Plus |
| CG5906-PA | 196 | CG5906-PA | 16..186 | 63..238 | 271 | 35.8 | Plus |
