Clone BO07108 Report

Search the DGRC for BO07108

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:71
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG1681-RA
Protein status:BO07108.pep: validated full length
Sequenced Size:745

Clone Sequence Records

BO07108.3prime Sequence

743 bp (742 high quality bases) assembled on 2005-12-04

> BO07108.3prime
ATGGTCTAGAAAGCTTGCTTGCTTCACCGCCTGGGCGACGCCCTGCTGCT
GACCACTGCCACTGCCCTTCAGCTTGGCCTCGAACTCGCCCAGCACCTCC
TTGTAGTGGGGACCCAGCTCCTCGCGCACCGTTTCATACCAACGCGCCAG
CTTGTTGCGATTCTGGAACGCATTGTAGCCAATGGATTTCGGCTGATCGA
TTTCGCAGATGGCGCTGAGATCCGCATACGAAATGTTGTCGCCCATCATG
AACTTGCGGGAGTTGAGGAATAGCTGTTCGAACTCGTTGAGCGTGTGCTC
CAGCTGCTTGCTGGCGAGATTCACCGCATTATCGGCTGGCCGGGTCTTTT
GCAGATACGGCACCAGCCACTTTTGCTGGAAATACTCCGTGGTGGCCACA
CCCATGTTGGTCTGCTGCCAGGCCAGGTACTCATCGATGCGACTACGGCC
GAGATGTCGTCGCGGATACCAGTGCTCCGGCACCAACTTTTCGCGTGCCA
GATGCCGGAAGATGGCCACATTCTCGGACAGCTGGTAGCCGTGATCCGTG
ATCGCCGGCAGCTTGCGGAACCGGTTCACATTGTCCCGGAACTCGCCAGT
CAGGTGCTCGCCTTTGAGCATCGATATGGGTATGGCCTCGAAGGGGATCT
TGGAGGCCTCCAGGAGGATGTAGAGCGCCCGGCTCGATTGGTTCAGGAAA
TCGAAGTAGAACTTGAGTGGCTGCGACATGTCGACTGATAACT

BO07108.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG1681-PA 714 CG1681-RA 1..711 729..19 3555 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:37:10
Subject Length Description Subject Range Query Range Score Percent Strand
GstT4-RA 1220 CG1681-RA 215..929 733..19 3560 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:37:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13408286..13408576 613..323 1455 100 Minus
X 23542271 X 13408863..13409032 188..19 850 100 Minus
X 23542271 X 13408655..13408791 325..189 685 100 Minus
X 23542271 X 13404963..13405089 733..607 605 98.4 Minus
Blast to na_te.dros performed on 2015-02-13 12:37:10 has no hits.

BO07108.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:25 Download gff for BO07108.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1681-PA 1..714 18..729 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:29 Download gff for BO07108.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1681-PA 1..714 18..729 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:04 Download gff for BO07108.3prime
Subject Subject Range Query Range Percent Splice Strand
GstT4-RA 206..934 12..743 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:16:27 Download gff for BO07108.3prime
Subject Subject Range Query Range Percent Splice Strand
GstT4-RA 206..934 12..743 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:16:27 Download gff for BO07108.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13408863..13409037 12..188 98   Minus
X 13404954..13405084 612..743 96 -> Minus
X 13408288..13408574 325..611 100 -> Minus
X 13408656..13408791 189..324 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:04 Download gff for BO07108.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13298987..13299117 612..743 96 -> Minus
arm_X 13302321..13302607 325..611 100 -> Minus
arm_X 13302689..13302824 189..324 100 -> Minus
arm_X 13302896..13303070 12..188 98   Minus

BO07108.5prime Sequence

743 bp (742 high quality bases) assembled on 2005-12-03

> BO07108.5prime
GAAGTTATCAGTCGACATGTCGCAGCCACTCAAGTTCTACTTCGATTTCC
TGAACCAATCGAGCCGGGCGCTCTACATCCTCCTGGAGGCCTCCAAGATC
CCCTTCGAGGCCATACCCATATCGATGCTCAAAGGCGAGCACCTGACTGG
CGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGCTGCCGGCGATCACGG
ATCACGGCTACCAGCTGTCCGAGAATGTGGCCATCTTCCGGCATCTGGCA
CGCGAAAAGTTGGTGCCGGAGCACTGGTATCCGCGACGACATCTCGGCCG
TAGTCGCATCGATGAGTACCTGGCCTGGCAGCAGACCAACATGGGTGTGG
CCACCACGGAGTATTTCCAGCAAAAGTGGCTGGTGCCGTATCTGCAAAAG
ACCCGGCCAGCCGATAATGCGGTGAATCTCGCCAGCAAGCAGCTGGAGCA
CACGCTCAACGAGTTCGAACAGCTATTCCTCAACTCCCGCAAGTTCATGA
TGGGCGACAACATTTCGTATGCGGATCTCAGCGCCATCTGCGAAATCGAT
CAGCCGAAATCCATTGGCTACAATGCGTTCCAGAATCGCAACAAGCTGGC
GCGTTGGTATGAAACGGTGCGCGAGGAGCTGGGTCCCCACTACAAGGAGG
TGCTGGGCGAGTTCGAGGCCAAGCTGAAGGGCAGTGGCAGTGGTCAGCAG
CAGGGCGTCGCCCAGGCGGTGAAGCAAGCAAGCTTTCTAGACC

BO07108.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG1681-PA 714 CG1681-RA 1..711 17..727 3555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
GstT4-RA 1220 CG1681-RA 215..929 13..727 3560 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:37:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13408286..13408576 133..423 1455 100 Plus
X 23542271 X 13408863..13409032 558..727 850 100 Plus
X 23542271 X 13408655..13408791 421..557 685 100 Plus
X 23542271 X 13404963..13405089 13..139 605 98.4 Plus
Blast to na_te.dros performed on 2015-02-13 12:37:25 has no hits.

BO07108.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:26 Download gff for BO07108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1681-PA 1..714 17..728 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:30 Download gff for BO07108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1681-PA 1..714 17..728 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:08 Download gff for BO07108.5prime
Subject Subject Range Query Range Percent Splice Strand
GstT4-RA 209..934 6..734 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:16:43 Download gff for BO07108.5prime
Subject Subject Range Query Range Percent Splice Strand
GstT4-RA 209..934 6..734 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:16:43 Download gff for BO07108.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13404957..13405084 6..134 97 -> Plus
X 13408288..13408574 135..421 100 -> Plus
X 13408656..13408791 422..557 100 -> Plus
X 13408863..13409037 558..734 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:08 Download gff for BO07108.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13298990..13299117 6..134 97 -> Plus
arm_X 13302321..13302607 135..421 100 -> Plus
arm_X 13302689..13302824 422..557 100 -> Plus
arm_X 13302896..13303070 558..734 98   Plus

BO07108.complete Sequence

745 bp (745 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630666

> BO07108.complete
GAAGTTATCAGTCGACATGTCGCAGCCACTCAAGTTCTACTTCGATTTCC
TGAACCAATCGAGCCGGGCGCTCTACATCCTCCTGGAGGCCTCCAAGATC
CCCTTCGAGGCCATACCCATATCGATGCTCAAAGGCGAGCACCTGACTGG
CGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGCTGCCGGCGATCACGG
ATCACGGCTACCAGCTGTCCGAGAATGTGGCCATCTTCCGGCATCTGGCA
CGCGAAAAGTTGGTGCCGGAGCACTGGTATCCGCGACGACATCTCGGCCG
TAGTCGCATCGATGAGTACCTGGCCTGGCAGCAGACCAACATGGGTGTGG
CCACCACGGAGTATTTCCAGCAAAAGTGGCTGGTGCCGTATCTGCAAAAG
ACCCGGCCAGCCGATAATGCGGTGAATCTCGCCAGCAAGCAGCTGGAGCA
CACGCTCAACGAGTTCGAACAGCTATTCCTCAACTCCCGCAAGTTCATGA
TGGGCGACAACATTTCGTATGCGGATCTCAGCGCCATCTGCGAAATCGAT
CAGCCGAAATCCATTGGCTACAATGCGTTCCAGAATCGCAACAAGCTGGC
GCGTTGGTATGAAACGGTGCGCGAGGAGCTGGGTCCCCACTACAAGGAGG
TGCTGGGCGAGTTCGAGGCCAAGCTGAAGGGCAGTGGCAGTGGTCAGCAG
CAGGGCGTCGCCCAGGCGGTGAAGCAAGCAAGCTTTCTAGACCAT

BO07108.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:17:17
Subject Length Description Subject Range Query Range Score Percent Strand
GstT4-RA 714 CG1681-PA 1..711 17..727 3555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
GstT4-RA 1220 CG1681-RA 215..929 13..727 3560 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13408286..13408576 133..423 1455 100 Plus
X 23542271 X 13408863..13409032 558..727 850 100 Plus
X 23542271 X 13408655..13408791 421..557 685 100 Plus
X 23542271 X 13404963..13405089 13..139 605 98.4 Plus
Blast to na_te.dros performed on 2014-11-28 01:17:16 has no hits.

BO07108.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:44:49 Download gff for BO07108.complete
Subject Subject Range Query Range Percent Splice Strand
CG1681-RA 1..714 17..728 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:03:57 Download gff for BO07108.complete
Subject Subject Range Query Range Percent Splice Strand
CG1681-RA 202..927 6..734 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:45:07 Download gff for BO07108.complete
Subject Subject Range Query Range Percent Splice Strand
GstT4-RA 219..929 17..729 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:44:49 Download gff for BO07108.complete
Subject Subject Range Query Range Percent Splice Strand
CG1681-RA 202..927 6..734 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:54 Download gff for BO07108.complete
Subject Subject Range Query Range Percent Splice Strand
GstT4-RA 219..929 17..729 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:54 Download gff for BO07108.complete
Subject Subject Range Query Range Percent Splice Strand
X 13404967..13405084 17..134 100 -> Plus
X 13408288..13408574 135..421 100 -> Plus
X 13408656..13408791 422..557 100 -> Plus
X 13408863..13409032 558..729 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:45:07 Download gff for BO07108.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13299000..13299117 17..134 100 -> Plus
arm_X 13302321..13302607 135..421 100 -> Plus
arm_X 13302689..13302824 422..557 100 -> Plus
arm_X 13302896..13303065 558..729 98   Plus

BO07108.pep Sequence

Translation from 16 to 745

> BO07108.pep
MSQPLKFYFDFLNQSSRALYILLEASKIPFEAIPISMLKGEHLTGEFRDN
VNRFRKLPAITDHGYQLSENVAIFRHLAREKLVPEHWYPRRHLGRSRIDE
YLAWQQTNMGVATTEYFQQKWLVPYLQKTRPADNAVNLASKQLEHTLNEF
EQLFLNSRKFMMGDNISYADLSAICEIDQPKSIGYNAFQNRNKLARWYET
VREELGPHYKEVLGEFEAKLKGSGSGQQQGVAQAVKQASFLDH

BO07108.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
GstT4-PA 237 CG1681-PA 1..237 1..237 1245 100 Plus
GstT3-PC 228 CG1702-PC 1..223 1..224 461 36.6 Plus
GstT3-PA 228 CG1702-PA 1..223 1..224 461 36.6 Plus
GstT3-PB 268 CG1702-PB 41..263 1..224 461 36.6 Plus
GstT1-PA 228 CG30000-PA 1..211 1..211 393 39.4 Plus