Clone Sequence Records
BO07108.3prime Sequence
743 bp (742 high quality bases) assembled on 2005-12-04
> BO07108.3prime
ATGGTCTAGAAAGCTTGCTTGCTTCACCGCCTGGGCGACGCCCTGCTGCT
GACCACTGCCACTGCCCTTCAGCTTGGCCTCGAACTCGCCCAGCACCTCC
TTGTAGTGGGGACCCAGCTCCTCGCGCACCGTTTCATACCAACGCGCCAG
CTTGTTGCGATTCTGGAACGCATTGTAGCCAATGGATTTCGGCTGATCGA
TTTCGCAGATGGCGCTGAGATCCGCATACGAAATGTTGTCGCCCATCATG
AACTTGCGGGAGTTGAGGAATAGCTGTTCGAACTCGTTGAGCGTGTGCTC
CAGCTGCTTGCTGGCGAGATTCACCGCATTATCGGCTGGCCGGGTCTTTT
GCAGATACGGCACCAGCCACTTTTGCTGGAAATACTCCGTGGTGGCCACA
CCCATGTTGGTCTGCTGCCAGGCCAGGTACTCATCGATGCGACTACGGCC
GAGATGTCGTCGCGGATACCAGTGCTCCGGCACCAACTTTTCGCGTGCCA
GATGCCGGAAGATGGCCACATTCTCGGACAGCTGGTAGCCGTGATCCGTG
ATCGCCGGCAGCTTGCGGAACCGGTTCACATTGTCCCGGAACTCGCCAGT
CAGGTGCTCGCCTTTGAGCATCGATATGGGTATGGCCTCGAAGGGGATCT
TGGAGGCCTCCAGGAGGATGTAGAGCGCCCGGCTCGATTGGTTCAGGAAA
TCGAAGTAGAACTTGAGTGGCTGCGACATGTCGACTGATAACT
BO07108.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1681-PA | 714 | CG1681-RA | 1..711 | 729..19 | 3555 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:37:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstT4-RA | 1220 | CG1681-RA | 215..929 | 733..19 | 3560 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:37:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13408286..13408576 | 613..323 | 1455 | 100 | Minus |
X | 23542271 | X | 13408863..13409032 | 188..19 | 850 | 100 | Minus |
X | 23542271 | X | 13408655..13408791 | 325..189 | 685 | 100 | Minus |
X | 23542271 | X | 13404963..13405089 | 733..607 | 605 | 98.4 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:37:10 has no hits.
BO07108.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:25 Download gff for
BO07108.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1681-PA | 1..714 | 18..729 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:29 Download gff for
BO07108.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1681-PA | 1..714 | 18..729 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:04 Download gff for
BO07108.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT4-RA | 206..934 | 12..743 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:16:27 Download gff for
BO07108.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT4-RA | 206..934 | 12..743 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:16:27 Download gff for
BO07108.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13408863..13409037 | 12..188 | 98 | | Minus |
X | 13404954..13405084 | 612..743 | 96 | -> | Minus |
X | 13408288..13408574 | 325..611 | 100 | -> | Minus |
X | 13408656..13408791 | 189..324 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:04 Download gff for
BO07108.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13298987..13299117 | 612..743 | 96 | -> | Minus |
arm_X | 13302321..13302607 | 325..611 | 100 | -> | Minus |
arm_X | 13302689..13302824 | 189..324 | 100 | -> | Minus |
arm_X | 13302896..13303070 | 12..188 | 98 | | Minus |
BO07108.5prime Sequence
743 bp (742 high quality bases) assembled on 2005-12-03
> BO07108.5prime
GAAGTTATCAGTCGACATGTCGCAGCCACTCAAGTTCTACTTCGATTTCC
TGAACCAATCGAGCCGGGCGCTCTACATCCTCCTGGAGGCCTCCAAGATC
CCCTTCGAGGCCATACCCATATCGATGCTCAAAGGCGAGCACCTGACTGG
CGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGCTGCCGGCGATCACGG
ATCACGGCTACCAGCTGTCCGAGAATGTGGCCATCTTCCGGCATCTGGCA
CGCGAAAAGTTGGTGCCGGAGCACTGGTATCCGCGACGACATCTCGGCCG
TAGTCGCATCGATGAGTACCTGGCCTGGCAGCAGACCAACATGGGTGTGG
CCACCACGGAGTATTTCCAGCAAAAGTGGCTGGTGCCGTATCTGCAAAAG
ACCCGGCCAGCCGATAATGCGGTGAATCTCGCCAGCAAGCAGCTGGAGCA
CACGCTCAACGAGTTCGAACAGCTATTCCTCAACTCCCGCAAGTTCATGA
TGGGCGACAACATTTCGTATGCGGATCTCAGCGCCATCTGCGAAATCGAT
CAGCCGAAATCCATTGGCTACAATGCGTTCCAGAATCGCAACAAGCTGGC
GCGTTGGTATGAAACGGTGCGCGAGGAGCTGGGTCCCCACTACAAGGAGG
TGCTGGGCGAGTTCGAGGCCAAGCTGAAGGGCAGTGGCAGTGGTCAGCAG
CAGGGCGTCGCCCAGGCGGTGAAGCAAGCAAGCTTTCTAGACC
BO07108.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:55:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1681-PA | 714 | CG1681-RA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:37:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstT4-RA | 1220 | CG1681-RA | 215..929 | 13..727 | 3560 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:37:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13408286..13408576 | 133..423 | 1455 | 100 | Plus |
X | 23542271 | X | 13408863..13409032 | 558..727 | 850 | 100 | Plus |
X | 23542271 | X | 13408655..13408791 | 421..557 | 685 | 100 | Plus |
X | 23542271 | X | 13404963..13405089 | 13..139 | 605 | 98.4 | Plus |
Blast to na_te.dros performed on 2015-02-13 12:37:25 has no hits.
BO07108.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:26 Download gff for
BO07108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1681-PA | 1..714 | 17..728 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:30 Download gff for
BO07108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1681-PA | 1..714 | 17..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:03:08 Download gff for
BO07108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT4-RA | 209..934 | 6..734 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:16:43 Download gff for
BO07108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT4-RA | 209..934 | 6..734 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:16:43 Download gff for
BO07108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13404957..13405084 | 6..134 | 97 | -> | Plus |
X | 13408288..13408574 | 135..421 | 100 | -> | Plus |
X | 13408656..13408791 | 422..557 | 100 | -> | Plus |
X | 13408863..13409037 | 558..734 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:03:08 Download gff for
BO07108.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13298990..13299117 | 6..134 | 97 | -> | Plus |
arm_X | 13302321..13302607 | 135..421 | 100 | -> | Plus |
arm_X | 13302689..13302824 | 422..557 | 100 | -> | Plus |
arm_X | 13302896..13303070 | 558..734 | 98 | | Plus |
BO07108.complete Sequence
745 bp (745 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630666
> BO07108.complete
GAAGTTATCAGTCGACATGTCGCAGCCACTCAAGTTCTACTTCGATTTCC
TGAACCAATCGAGCCGGGCGCTCTACATCCTCCTGGAGGCCTCCAAGATC
CCCTTCGAGGCCATACCCATATCGATGCTCAAAGGCGAGCACCTGACTGG
CGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGCTGCCGGCGATCACGG
ATCACGGCTACCAGCTGTCCGAGAATGTGGCCATCTTCCGGCATCTGGCA
CGCGAAAAGTTGGTGCCGGAGCACTGGTATCCGCGACGACATCTCGGCCG
TAGTCGCATCGATGAGTACCTGGCCTGGCAGCAGACCAACATGGGTGTGG
CCACCACGGAGTATTTCCAGCAAAAGTGGCTGGTGCCGTATCTGCAAAAG
ACCCGGCCAGCCGATAATGCGGTGAATCTCGCCAGCAAGCAGCTGGAGCA
CACGCTCAACGAGTTCGAACAGCTATTCCTCAACTCCCGCAAGTTCATGA
TGGGCGACAACATTTCGTATGCGGATCTCAGCGCCATCTGCGAAATCGAT
CAGCCGAAATCCATTGGCTACAATGCGTTCCAGAATCGCAACAAGCTGGC
GCGTTGGTATGAAACGGTGCGCGAGGAGCTGGGTCCCCACTACAAGGAGG
TGCTGGGCGAGTTCGAGGCCAAGCTGAAGGGCAGTGGCAGTGGTCAGCAG
CAGGGCGTCGCCCAGGCGGTGAAGCAAGCAAGCTTTCTAGACCAT
BO07108.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:17:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstT4-RA | 714 | CG1681-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstT4-RA | 1220 | CG1681-RA | 215..929 | 13..727 | 3560 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:17:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13408286..13408576 | 133..423 | 1455 | 100 | Plus |
X | 23542271 | X | 13408863..13409032 | 558..727 | 850 | 100 | Plus |
X | 23542271 | X | 13408655..13408791 | 421..557 | 685 | 100 | Plus |
X | 23542271 | X | 13404963..13405089 | 13..139 | 605 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:17:16 has no hits.
BO07108.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:44:49 Download gff for
BO07108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1681-RA | 1..714 | 17..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:03:57 Download gff for
BO07108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1681-RA | 202..927 | 6..734 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:45:07 Download gff for
BO07108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT4-RA | 219..929 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:44:49 Download gff for
BO07108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1681-RA | 202..927 | 6..734 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:54 Download gff for
BO07108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT4-RA | 219..929 | 17..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:54 Download gff for
BO07108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13404967..13405084 | 17..134 | 100 | -> | Plus |
X | 13408288..13408574 | 135..421 | 100 | -> | Plus |
X | 13408656..13408791 | 422..557 | 100 | -> | Plus |
X | 13408863..13409032 | 558..729 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:45:07 Download gff for
BO07108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13299000..13299117 | 17..134 | 100 | -> | Plus |
arm_X | 13302321..13302607 | 135..421 | 100 | -> | Plus |
arm_X | 13302689..13302824 | 422..557 | 100 | -> | Plus |
arm_X | 13302896..13303065 | 558..729 | 98 | | Plus |
BO07108.pep Sequence
Translation from 16 to 745
> BO07108.pep
MSQPLKFYFDFLNQSSRALYILLEASKIPFEAIPISMLKGEHLTGEFRDN
VNRFRKLPAITDHGYQLSENVAIFRHLAREKLVPEHWYPRRHLGRSRIDE
YLAWQQTNMGVATTEYFQQKWLVPYLQKTRPADNAVNLASKQLEHTLNEF
EQLFLNSRKFMMGDNISYADLSAICEIDQPKSIGYNAFQNRNKLARWYET
VREELGPHYKEVLGEFEAKLKGSGSGQQQGVAQAVKQASFLDH
BO07108.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:36:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstT4-PA | 237 | CG1681-PA | 1..237 | 1..237 | 1245 | 100 | Plus |
GstT3-PC | 228 | CG1702-PC | 1..223 | 1..224 | 461 | 36.6 | Plus |
GstT3-PA | 228 | CG1702-PA | 1..223 | 1..224 | 461 | 36.6 | Plus |
GstT3-PB | 268 | CG1702-PB | 41..263 | 1..224 | 461 | 36.6 | Plus |
GstT1-PA | 228 | CG30000-PA | 1..211 | 1..211 | 393 | 39.4 | Plus |