Clone Sequence Records
BO07116.3prime Sequence
380 bp (379 high quality bases) assembled on 2005-12-04
> BO07116.3prime
ATGGTCTAGAAAGCTTGCTCTTATTATCGATATGTTCGGGAATAAAATAT
GTATAATTTTATATATACTAACTATTATAGCAACTATATCATAACTATAA
TTTTCCCTTGGCGAATTCCAGTGTGATGGTCCTGGGATCGAAATCAGTTT
TATTTTAATACACCGAGTTAACCACAAAAGTGGCATGCCCAACTCATCTA
ATGAAAGTTTTTGCCCATTCGGGCAGATTATTTTACATTTCATTAATGTG
TCGAAAAAGGGAAATGCTTTCAATGAAAGCTGCTCCCAGGCCCAGCTGCC
TGTGTTCCCCATCATCATCATCATCATCCTCATTCTCATCGTCGCAACCA
TCATCATCATCATCATGTCGACTGATAACT
BO07116.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13130-PA | 351 | CG13130-RA | 1..348 | 366..19 | 1740 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 03:29:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:29:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9983701..9984048 | 19..366 | 1740 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 03:29:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\Vege | 884 | Dwil\Vege VEGE 884bp Derived from AF518730. | 622..708 | 17..104 | 121 | 64 | Plus |
BO07116.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:39 Download gff for
BO07116.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-PA | 1..351 | 15..366 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:47 Download gff for
BO07116.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-PA | 1..351 | 15..366 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:54:45 Download gff for
BO07116.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-RA | 456..806 | 15..366 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:06:49 Download gff for
BO07116.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9983698..9984054 | 15..367 | 98 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:06:49 Download gff for
BO07116.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9983698..9984054 | 15..367 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:54:45 Download gff for
BO07116.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9983698..9984054 | 15..367 | 98 | -> | Plus |
BO07116.5prime Sequence
380 bp (379 high quality bases) assembled on 2005-12-04
> BO07116.5prime
GAAGTTATCAGTCGACATGATGATGATGATGATGGTTGCGACGATGAGAA
TGAGGATGATGATGATGATGATGGGGAACACAGGCAGCTGGGCCTGGGAG
CAGCTTTCATTGAAAGCATTTCCCTTTTTCGACACATTAATGAAATGTAA
AATAATCTGCCCGAATGGGCAAAAACTTTCATTAGATGAGTTGGGCATGC
CACTTTTGTGGTTAACTCGGTGTATTAAAATAAAACTGATTTCGATCCCA
GGACCATCACACTGGAATTCGCCAAGGGAAAATTATAGTTATGATATAGT
TGCTATAATAGTTAGTATATATAAAATTATACATATTTTATTCCCGAACA
TATCGATAATAAGAGCAAGCTTTCTAGACC
BO07116.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13130-PA | 351 | CG13130-RA | 1..348 | 17..364 | 1740 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 17:02:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:02:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9983701..9984048 | 364..17 | 1740 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 17:02:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\Vege | 884 | Dwil\Vege VEGE 884bp Derived from AF518730. | 622..708 | 366..279 | 121 | 64 | Minus |
BO07116.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:40 Download gff for
BO07116.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-PA | 1..351 | 17..368 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:48:48 Download gff for
BO07116.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-PA | 1..351 | 17..368 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:42:06 Download gff for
BO07116.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-RA | 456..806 | 17..368 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:02:46 Download gff for
BO07116.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9983698..9984054 | 16..368 | 98 | -> | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:02:46 Download gff for
BO07116.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9983698..9984054 | 16..368 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:42:06 Download gff for
BO07116.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9983698..9984054 | 16..368 | 98 | -> | Minus |
BO07116.complete Sequence
382 bp (382 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630670
> BO07116.complete
GAAGTTATCAGTCGACATGATGATGATGATGATGGTTGCGACGATGAGAA
TGAGGATGATGATGATGATGATGGGGAACACAGGCAGCTGGGCCTGGGAG
CAGCTTTCATTGAAAGCATTTCCCTTTTTCGACACATTAATGAAATGTAA
AATAATCTGCCCGAATGGGCAAAAACTTTCATTAGATGAGTTGGGCATGC
CACTTTTGTGGTTAACTCGGTGTATTAAAATAAAACTGATTTCGATCCCA
GGACCATCACACTGGAATTCGCCAAGGGAAAATTATAGTTATGATATAGT
TGCTATAATAGTTAGTATATATAAAATTATACATATTTTATTCCCGAACA
TATCGATAATAAGAGCAAGCTTTCTAGACCAT
BO07116.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 10:03:09 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 10:03:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:03:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9983701..9984048 | 364..17 | 1740 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 10:03:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\Vege | 884 | Dwil\Vege VEGE 884bp Derived from AF518730. | 622..708 | 366..279 | 121 | 64 | Minus |
BO07116.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:56:31 Download gff for
BO07116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-RA | 1..351 | 17..368 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:29:02 Download gff for
BO07116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-RA | 370..720 | 17..368 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:04:13 Download gff for
BO07116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-RA | 456..803 | 17..366 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:56:31 Download gff for
BO07116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13130-RA | 370..720 | 17..368 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:11:43 Download gff for
BO07116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9983699..9984048 | 17..366 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:11:43 Download gff for
BO07116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9983699..9984048 | 17..366 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:04:13 Download gff for
BO07116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9983699..9984048 | 17..366 | 99 | | Minus |
BO07116.pep Sequence
Translation from 16 to 382
> BO07116.pep
MMMMMMVATMRMRMMMMMMGNTGSWAWEQLSLKAFPFFDTLMKCKIICPN
GQKLSLDELGMPLLWLTRCIKIKLISIPGPSHWNSPRENYSYDIVAIIVS
IYKIIHILFPNISIIRASFLDH
Sequence BO07116.pep has no blast hits.