Clone BO07125 Report

Search the DGRC for BO07125

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:71
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG6443-RA
Protein status:BO07125.pep: validated full length
Sequenced Size:931

Clone Sequence Records

BO07125.3prime Sequence

922 bp (869 high quality bases) assembled on 2005-12-04

> BO07125.3prime
ATGGTCTAGAAAGCTTGCATTGTAGAATGGATTATAGGTGACCCAGTGGG
CGCGCTCCTGGTCCTTTTCGGTTTTATGGGAGGTGAAAAGGGACTTGTAA
ACATCGCTGGCCTTCGGGTCCTTGGCCACGCTGAAGTCGCTCTTGAGACG
CTTCAGTTCGGGATCCTGCATTGCATTAACGGCGCCCAGTCGTTTGACCG
GCGCCACCGCCTTGGTTTTTGTGCTTGTAGTGGGCTTCTCTGCGGCTGCA
GCCTTGGATGTGGACGCCACTGGCTCCTGTTCCTCTGCGGGCTCCGCTTT
CACCTCCACCTTTTTGGCACTCTTCTTGTCCTTTTTGGAGGACTTACGCT
TGGCCGCACGCATTTCCATCTTGACCCGCATGAGCTCCATGTCCTCCTCG
TTGCCATTGAGGACCACCACGTCCTCAACGCTATAGGCAGCCTGGCACAG
CGGACAAGTGCTAGCCACACTGCCTTTGATCTGTTTCAAGGCACGCTCTG
ATAAAACGCATCCGCAGCTCCAAAGGGCCACAAAGCGAAATTTGCCGGAC
ATCTCCAGGCCAATCAGCTTGCAGATGTAAGGAGAATGTCGTGTGTCCAG
CAGTCCCTCAGTTTTGTCCTCCTCGGTGAAGGCGGGATTGGGTGTGGGAT
TAAGCTGGCGAATGTCCTTCATGCTCTTCACGTGCGCAGCTGTCTCTGGC
ATCGGTTCCTTCTCCAGCAGTCGCTCAATGACGCTCTGCTTGGAATAGAG
CCTACCCATGCCGCACATGGCGATCGGCTCCTGGAGGCTTTGCTGGGGTC
AGGTGCAGTGGCGCCAACGGAACTCCCTCTCCGCATCTTTGTCTTTCTGC
TCTGGCTTTTGCTTCACGCGCACCAGCTCATCGCGCCTGGGAATAGTTCC
TCCATCGCAACCCATGTCGACT

BO07125.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG6443-PA 900 CG6443-RA 119..897 797..19 3895 100 Minus
CG6443-PA 900 CG6443-RA 1..115 915..801 575 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:28:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG6443-RA 1184 CG6443-RA 184..1081 916..19 4445 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:28:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10729369..10730199 849..19 4110 99.6 Minus
2L 23513712 2L 10729239..10729308 916..847 350 100 Minus
Blast to na_te.dros performed on 2015-02-09 19:28:18 has no hits.

BO07125.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:09:59 Download gff for BO07125.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6443-PA 1..900 18..915 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:13 Download gff for BO07125.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6443-PA 1..900 18..915 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:08:07 Download gff for BO07125.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6443-RA 179..1081 19..922 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:19:34 Download gff for BO07125.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6443-RA 179..1081 19..922 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:19:34 Download gff for BO07125.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10729234..10729308 847..922 94 -> Minus
2L 10729372..10730199 19..846 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:08:07 Download gff for BO07125.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10729234..10729308 847..922 94 -> Minus
arm_2L 10729372..10730199 19..846 99   Minus

BO07125.5prime Sequence

883 bp (846 high quality bases) assembled on 2005-12-03

> BO07125.5prime
GAAGTTATCAGTCGACATGGGTTGCGATGGAGGAACTATTCCCAGGCGCG
ATGAGCTGGTGCGCGTGAAGCAAAAGCCAGAGCAGAAAGACAAAGATGCG
GAGAGGGAGTTCCGTTGGCGCCACTGCACCTTGACCCAGCAAAGCCTCCA
GGAGCCGATCGCCATGTGCGGCATGGGTAGGCTCTATTCCAAGCAGAGCG
TCATTGAGCGACTGCTGGAGAAGGAACCGATGCCAGAGACAGCTGCGCAC
GTGAAGAGCATGAAGGACATTCGCCAGCTTAATCCCACACCCAATCCCGC
CTTCACCGAGGAGGACAAAACTGAGGGACTGCTGGACACACGACATTCTC
CTTACATCTGCAAGCTGATTGGCCTGGAGATGTCCGGCAAATTTCGCTTT
GTGGCCCTTTGGAGCTGCGGATGCGTTTTATCAGAGCGTGCCTTGAAACA
GATCAAAGGCAGTGTGGCTAGCACTTGTCCGCTGTGCCAGGCTGCCTATA
GCGTTGAGGACGTGGTGGTCCTCAATGGCAACGAGGAGGACATGGAGCTC
ATGCGGGTCAAGATGGAAATGCGTGCGGCCAAGCGTAAGTCCTCCAAAAA
GGACAAGAAGAGTGCCAAAAAGGTGGAGGTGAAAGCGGAGCCCGCAGAGG
AACAGGAGCCAGTGGCGTCCACATCCAAGGCTGCAGCCGCAGAGAAGCCC
ACTACAAGCACAAAAACCAAGGCGGTGGCGCCGGTCAAACGACTGGGCGC
CGTTAATGCAATGCAGGATCCCGAACTGAAGCGTCTCAAGAGCGACTTCA
GCGTGGCCAAGGACCCGAAGGCCAGCGATGTTTACAAGTCCCTTTTTCAC
CTCCATAAAACCCGAAAGGACCAGGAGCGCGCC

BO07125.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG6443-PA 900 CG6443-RA 1..830 17..846 4150 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:09:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG6443-RA 1184 CG6443-RA 184..1051 16..883 4265 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:09:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10729369..10730169 83..883 3900 99.1 Plus
2L 23513712 2L 10729239..10729308 16..85 350 100 Plus
Blast to na_te.dros performed on 2015-02-11 05:09:36 has no hits.

BO07125.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:00 Download gff for BO07125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6443-PA 1..867 17..883 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:15 Download gff for BO07125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6443-PA 1..867 17..883 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:10 Download gff for BO07125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6443-RA 184..1051 16..883 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:34:28 Download gff for BO07125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6443-RA 184..1051 16..883 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:34:28 Download gff for BO07125.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10729239..10729308 16..85 100 -> Plus
2L 10729372..10730169 86..883 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:10 Download gff for BO07125.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10729239..10729308 16..85 100 -> Plus
arm_2L 10729372..10730169 86..883 99   Plus

BO07125.complete Sequence

931 bp (931 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630675

> BO07125.complete
GAAGTTATCAGTCGACATGGGTTGCGATGGAGGAACTATTCCCAGGCGCG
ATGAGCTGGTGCGCGTGAAGCAAAAGCCAGAGCAGAAAGACAAAGATGCG
GAGAGGGAGTTCCGTTGGCGCCACTGCACCTTGACCCAGCAAAGCCTCCA
GGAGCCGATCGCCATGTGCGGCATGGGTAGGCTCTATTCCAAGCAGAGCG
TCATTGAGCGACTGCTGGAGAAGGAACCGATGCCAGAGACAGCTGCGCAC
GTGAAGAGCATGAAGGACATTCGCCAGCTTAATCCCACACCCAATCCCGC
CTTCACCGAGGAGGACAAAACTGAGGGACTGCTGGACACACGACATTCTC
CTTACATCTGCAAGCTGATTGGCCTGGAGATGTCCGGCAAATTTCGCTTT
GTGGCCCTTTGGAGCTGCGGATGCGTTTTATCAGAGCGTGCCTTGAAACA
GATCAAAGGCAGTGTGGCTAGCACTTGTCCGCTGTGCCAGGCTGCCTATA
GCGTTGAGGACGTGGTGGTCCTCAATGGCAACGAGGAGGACATGGAGCTC
ATGCGGGTCAAGATGGAAATGCGTGCGGCCAAGCGTAAGTCCTCCAAAAA
GGACAAGAAGAGTGCCAAAAAGGTGGAGGTGAAAGCGGAGCCCGCAGAGG
AACAGGAGCCAGTGGCGTCCACATCCAAGGCTGCAGCCGCAGAGAAGCCC
ACTACAAGCACAAAAACCAAGGCGGTGGCGCCGGTCAAACGACTGGGCGC
CGTTAATGCAATGCAGGATCCCGAACTGAAGCGTCTCAAGAGCGACTTCA
GCGTGGCCAAGGACCCGAAGGCCAGCGATGTTTACAAGTCCCTTTTCACC
TCCCATAAAACCGAAAAGGACCAGGAGCGCGCCCACTGGGTCACCTATAA
TCCATTCTACAATGCAAGCTTTCTAGACCAT

BO07125.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG6443-RA 900 CG6443-PA 1..897 17..913 4485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:17:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG6443-RA 1184 CG6443-RA 184..1081 16..913 4490 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10729369..10730199 83..913 4155 100 Plus
2L 23513712 2L 10729239..10729308 16..85 350 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:17:27 has no hits.

BO07125.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:15 Download gff for BO07125.complete
Subject Subject Range Query Range Percent Splice Strand
CG6443-RA 1..900 17..914 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:44 Download gff for BO07125.complete
Subject Subject Range Query Range Percent Splice Strand
CG6443-RA 187..1084 16..913 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:56 Download gff for BO07125.complete
Subject Subject Range Query Range Percent Splice Strand
CG6443-RA 185..1081 17..915 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:16 Download gff for BO07125.complete
Subject Subject Range Query Range Percent Splice Strand
CG6443-RA 187..1084 16..913 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:13 Download gff for BO07125.complete
Subject Subject Range Query Range Percent Splice Strand
CG6443-RA 185..1081 17..915 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:13 Download gff for BO07125.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10729240..10729308 17..85 100 -> Plus
2L 10729372..10730199 86..915 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:56 Download gff for BO07125.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10729240..10729308 17..85 100 -> Plus
arm_2L 10729372..10730199 86..915 99   Plus

BO07125.pep Sequence

Translation from 16 to 931

> BO07125.pep
MGCDGGTIPRRDELVRVKQKPEQKDKDAEREFRWRHCTLTQQSLQEPIAM
CGMGRLYSKQSVIERLLEKEPMPETAAHVKSMKDIRQLNPTPNPAFTEED
KTEGLLDTRHSPYICKLIGLEMSGKFRFVALWSCGCVLSERALKQIKGSV
ASTCPLCQAAYSVEDVVVLNGNEEDMELMRVKMEMRAAKRKSSKKDKKSA
KKVEVKAEPAEEQEPVASTSKAAAAEKPTTSTKTKAVAPVKRLGAVNAMQ
DPELKRLKSDFSVAKDPKASDVYKSLFTSHKTEKDQERAHWVTYNPFYNA
SFLDH

BO07125.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG6443-PA 299 CG6443-PA 1..299 1..299 1549 100 Plus