Clone Sequence Records
BO07127.3prime Sequence
791 bp (760 high quality bases) assembled on 2005-12-04
> BO07127.3prime
ATGGTCTAGAAAGCTTGCGAAGCCGCTGGCCACAAATATCTTTTCCACCT
CCCCGAACACCTCTTCCGCATCCGGACTGGCATCGATCCGTTTCACCTGG
CCGGCGCCCTCGAAGAACTTGATGATGGGCAGCGAGTCGTTGTTGTATGT
CGAGATGCGCTTCTTCAGGCTGTCCAGGTTGTCGTCCGTCCGGCCAGAGC
CGCTCTGGCCGCGGCCCAGACACCGTTTGACGCACACATCCTCGCCGCAG
TCGAAGAAGAGGACAAACTGGAAGTCCACCTTCTCGGACATCTGGCGGTT
CCAACCGTCCAGATTATCCTGATTGCGTGGGAAGCCGTCGATGAGGAACC
GCGACTTTCCCGACGCCTTCATGGCGTTCTCCAGCAGCGAACACGTGACC
TCGACGGGCACAATTTTGCCATTGCGAATGTAGTCCTCGATGAGGTTACC
GAATTCGGAGCCCTCCCGCGACCGCTCCTCGCGCAGGAGATCGCCGGCCG
AGAGATGGGTGAATTGGAAGCGATCCACGATCCTGGAGCATTGGGTGCCC
TTGCCGGCCCCGGGACCGCCCAAAACAAAGACAATCTTTGGCTTCTCTAC
GCTCATGATTCCGATATTGTGTGGTGGGGCTGTGGAGGTGGTGGTGATGA
ACCTATTGCTGGCCTTGGAATGTCGCAATTGGTGCTGCGTCAGCGCTGAT
GGTGCGAGACCGACTCCTGGTGAACCGCAATCGTTGGCTACTGCTCTCAA
CGTCGTTCGTGCCAAAGCCCGCCACATGTCGACTGATAACT
BO07127.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6092-PA | 762 | Dak1-RA | 1..759 | 777..19 | 3795 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:28:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-RA | 1202 | CG6092-RA | 93..861 | 786..19 | 3805 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:28:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26054578..26055336 | 19..777 | 3795 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:28:31 has no hits.
BO07127.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:03 Download gff for
BO07127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-PA | 1..762 | 18..777 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:19 Download gff for
BO07127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6092-PA | 1..762 | 18..777 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:08:08 Download gff for
BO07127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 89..869 | 9..791 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:19:35 Download gff for
BO07127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 89..869 | 9..791 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:19:35 Download gff for
BO07127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26054570..26055348 | 9..791 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:08:08 Download gff for
BO07127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21880292..21881070 | 9..791 | 98 | | Plus |
BO07127.5prime Sequence
791 bp (790 high quality bases) assembled on 2005-12-03
> BO07127.5prime
GAAGTTATCAGTCGACATGTGGCGGGCTTTGGCACGAACGACGTTGAGAG
CAGTAGCCAACGATTGCGGTTCACCAGGAGTCGGTCTCGCACCATCAGCG
CTGACGCAGCACCAATTGCGACATTCCAAGGCCAGCAATAGGTTCATCAC
CACCACCTCCACAGCCCCACCACACAATATCGGAATCATGAGCGTAGAGA
AGCCAAAGATTGTCTTTGTTTTGGGCGGTCCCGGGGCCGGCAAGGGCACC
CAATGCTCCAGGATCGTGGATCGCTTCCAATTCACCCATCTCTCGGCCGG
CGATCTCCTGCGCGAGGAGCGGTCGCGGGAGGGCTCCGAATTCGGTAACC
TCATCGAGGACTACATTCGCAATGGCAAAATTGTGCCCGTCGAGGTCACG
TGTTCGCTGCTGGAGAACGCCATGAAGGCGTCGGGAAAGTCGCGGTTCCT
CATCGACGGCTTCCCACGCAATCAGGATAATCTGGACGGTTGGAACCGCC
AGATGTCCGAGAAGGTGGACTTCCAGTTTGTCCTCTTCTTCGACTGCGGC
GAGGATGTGTGCGTCAAACGGTGTCTGGGCCGCGGCCAGAGCGGCTCTGG
CCGGACGGACGACAACCTGGACAGCCTGAAGAAGCGCATCTCGACATACA
ACAACGACTCGCTGCCCATCATCAAGTTCTTCGAGGGCGCCGGCCAGGTG
AAACGGATCGATGCCAGTCCGGATGCGGAAGAGGTGTTCGGGGAGGTGGA
AAAGATATTTGTGGCCAGCGGCTTCGCAAGCTTTCTAGACC
BO07127.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6092-PA | 762 | Dak1-RA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:17:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-RA | 1202 | CG6092-RA | 93..861 | 8..775 | 3805 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:17:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26054578..26055336 | 775..17 | 3795 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 20:17:36 has no hits.
BO07127.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:04 Download gff for
BO07127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-PA | 1..762 | 17..776 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:20 Download gff for
BO07127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6092-PA | 1..762 | 17..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:24:07 Download gff for
BO07127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 93..869 | 8..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:47:48 Download gff for
BO07127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 93..869 | 8..785 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:47:48 Download gff for
BO07127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26054570..26055346 | 8..785 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:24:07 Download gff for
BO07127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21880292..21881068 | 8..785 | 99 | | Minus |
BO07127.complete Sequence
793 bp (793 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630677
> BO07127.complete
GAAGTTATCAGTCGACATGTGGCGGGCTTTGGCACGAACGACGTTGAGAG
CAGTAGCCAACGATTGCGGTTCACCAGGAGTCGGTCTCGCACCATCAGCG
CTGACGCAGCACCAATTGCGACATTCCAAGGCCAGCAATAGGTTCATCAC
CACCACCTCCACAGCCCCACCACACAATATCGGAATCATGAGCGTAGAGA
AGCCAAAGATTGTCTTTGTTTTGGGCGGTCCCGGGGCCGGCAAGGGCACC
CAATGCTCCAGGATCGTGGATCGCTTCCAATTCACCCATCTCTCGGCCGG
CGATCTCCTGCGCGAGGAGCGGTCGCGGGAGGGCTCCGAATTCGGTAACC
TCATCGAGGACTACATTCGCAATGGCAAAATTGTGCCCGTCGAGGTCACG
TGTTCGCTGCTGGAGAACGCCATGAAGGCGTCGGGAAAGTCGCGGTTCCT
CATCGACGGCTTCCCACGCAATCAGGATAATCTGGACGGTTGGAACCGCC
AGATGTCCGAGAAGGTGGACTTCCAGTTTGTCCTCTTCTTCGACTGCGGC
GAGGATGTGTGCGTCAAACGGTGTCTGGGCCGCGGCCAGAGCGGCTCTGG
CCGGACGGACGACAACCTGGACAGCCTGAAGAAGCGCATCTCGACATACA
ACAACGACTCGCTGCCCATCATCAAGTTCTTCGAGGGCGCCGGCCAGGTG
AAACGGATCGATGCCAGTCCGGATGCGGAAGAGGTGTTCGGGGAGGTGGA
AAAGATATTTGTGGCCAGCGGCTTCGCAAGCTTTCTAGACCAT
BO07127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:54:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-RA | 762 | CG6092-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-RA | 1202 | CG6092-RA | 103..861 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26054578..26055336 | 775..17 | 3795 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:54:51 has no hits.
BO07127.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:31 Download gff for
BO07127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RB | 1..762 | 17..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:32:20 Download gff for
BO07127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sld5-RC | 1028..1804 | 8..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:58 Download gff for
BO07127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 103..861 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:31 Download gff for
BO07127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sld5-RC | 1028..1804 | 8..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:38 Download gff for
BO07127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 103..861 | 17..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:55:38 Download gff for
BO07127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26054576..26055336 | 17..777 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:58 Download gff for
BO07127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21880298..21881058 | 17..777 | 99 | | Minus |
BO07127.pep Sequence
Translation from 16 to 793
> BO07127.pep
MWRALARTTLRAVANDCGSPGVGLAPSALTQHQLRHSKASNRFITTTSTA
PPHNIGIMSVEKPKIVFVLGGPGAGKGTQCSRIVDRFQFTHLSAGDLLRE
ERSREGSEFGNLIEDYIRNGKIVPVEVTCSLLENAMKASGKSRFLIDGFP
RNQDNLDGWNRQMSEKVDFQFVLFFDCGEDVCVKRCLGRGQSGSGRTDDN
LDSLKKRISTYNNDSLPIIKFFEGAGQVKRIDASPDAEEVFGEVEKIFVA
SGFASFLDH
BO07127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-PA | 253 | CG6092-PA | 1..253 | 1..253 | 1319 | 100 | Plus |
| Adk1-PA | 201 | CG17146-PA | 6..182 | 65..244 | 288 | 36.6 | Plus |
| Adk1-PB | 229 | CG17146-PB | 34..210 | 65..244 | 288 | 36.6 | Plus |
| Adk2-PA | 240 | CG3140-PA | 14..230 | 52..248 | 240 | 28.9 | Plus |
| CG9541-PC | 616 | CG9541-PC | 327..502 | 63..247 | 185 | 24.3 | Plus |
