Clone Sequence Records
BO07128.3prime Sequence
849 bp (813 high quality bases) assembled on 2005-12-04
> BO07128.3prime
ATGGTCTAGAAAGCTTGCTCCGTGACTATTCTGGAGACTGTGATGATTGC
TTAGATGCCTCATGTAGATATCCAAGTCATCTTCGCTAGATATAGCATTC
TCATCCGCAGCATGCTCCTCCAATTCCTCCTCGTCCTCGCTATCCTCAAA
GTAGGCATCTTCTTCATCCTGCTCAATTTGCTTCAGATCATCCAGCAAAG
TGTTATCATCTACGGCCTTATAATCAAAATCCTTGTCTTCGCCACTAAGA
AAGCGTTCCTTCATCATACTCAAGAACTCATTGCGTAGTAGTTCTCGCTC
TCCAGGATTATAGAACTCCGGTGTGGAGATCATAGTTGTATTCATTGGAG
CTCGGACTTCCGCATTTCGACTCGTTGAACAGGCCACTGGTTCATCATCT
TCAAATCCACCCCACTGCTTTCGGCAAGCGACAGGAACGTCACAGTCTGC
CTGAGGATTGGATTCACTTGTGACCTGCACGCTCTGCTTTCCTTCCTGCT
GCGTTTCCTCTAGTAATTCATCTCTTTGCTTTTTCTCCAACGTATGCATT
AGTATTCCTGAGAAGCTAGTATTCCGAACATCGTAACTATCCCGAGCCTT
CTTTTCCGCCTCCGTTAGGTACTGACCCACTAGCTCCTGGTAGAGATCCG
GCGCCCTTTGCATCATCTCGTGTTCGCTAAAGTATTCTCCCTTGTCAAGG
AGCTGCTGCATGGCATGGTATCTTCGGTTTTTAATGGATACCGCACGAGT
GTTGAGTTTCCTCCTAAAATCCTCTAGCAGCAGGCACATCTCCTCCAGAT
TTTCATCTGCTTTAATGGGTTCCTTGACAGCCAGTTCCTGGAAGGAACC
BO07128.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-PA | 1095 | CG7810-RA | 262..1092 | 849..19 | 4155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:18:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-RA | 1320 | CG7810-RA | 334..1164 | 849..19 | 4155 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:18:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8310032..8310862 | 19..849 | 4155 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:18:06 has no hits.
BO07128.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:05 Download gff for
BO07128.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-PA | 262..1095 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:22 Download gff for
BO07128.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-PA | 262..1095 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:10:35 Download gff for
BO07128.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 334..1167 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:33:08 Download gff for
BO07128.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 334..1167 | 15..849 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:33:08 Download gff for
BO07128.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8310029..8310862 | 15..849 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:10:35 Download gff for
BO07128.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8310029..8310862 | 15..849 | 99 | | Plus |
BO07128.5prime Sequence
885 bp (863 high quality bases) assembled on 2005-12-04
> BO07128.5prime
GAAGTTATCAGTCGACATGACAACTGGAAGCGATGCTGACGGGGATGGTG
ACCACCAGGGCAACAATGACATCGTCCCAAATCCAGAACATCCTCCGGAG
ATAATAGACATCTTCAAATCCTTGGCCGAAAACAATCAAATCGTCTTTAA
GTCGCAGCAAATTGATGATCCGGAAATTCCGGTCGAAGAGAAGCAACAAA
TAGCACGAGATGCCTTCGATAAGAACCGTGAGAACTTTCTCATCCGATTT
GGAGGCTTCCTGAATGTAAGACAACTGGGTTCCTTCCAGGAACTGGCTGT
CAAGGAACCCATTAAAGCAGATGAAAATCTGGAGGAGATGTGCCTGCTGC
TAGAGGATTTTAGGAGGAAACTCAACACTCGTGCGGTATCCATTAAAAAC
CGAAGATACCATGCCATGCAGCAGCTCCTTGACAAGGGAGAATACTTTAG
CGAACACGAGATGATGCAAAGGGCGCCGGATCTCTACCAGGAGCTAGTGG
GTCAGTACCTAACGGAGGCGGAAAAGAAGGCTCGGGATAGTTACGATGTT
CGGAATACTAGCTTCTCAGGAATACTAATGCATACGTTGGAGAAAAAGCA
AAGAGATGAATTACTAGAGGAAACGCAGCAGGAAGGAAAGCAGAGCGTGC
AGGTCACAAGTGAATCCAATCCTCAGGCAGACTGTGACGTTCCTGTCGCT
TGCCGAAAGCAGTGGGGTGGATTTGAAGATGATGAACCAGTGGCCTGTTC
AACGAGTCGAAATGCGGAAGTCCGAGCTCCAATGAATACAACTATGATCT
CCACACCGGAGTTTCTATATCCTGGAGAGCGAGAACTACTACGCAATGAG
TTCTTGAGTATGATGAAGGAACGCTTTCTTAGTGG
BO07128.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-PA | 1095 | CG7810-RA | 1..797 | 17..813 | 3985 | 100 | Plus |
CG7810-PA | 1095 | CG7810-RA | 803..869 | 819..885 | 335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:00:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-RA | 1320 | CG7810-RA | 73..941 | 17..885 | 4300 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:00:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8310255..8311123 | 885..17 | 4270 | 99.4 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:00:19 has no hits.
BO07128.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:06 Download gff for
BO07128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-PA | 1..869 | 17..885 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:23 Download gff for
BO07128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-PA | 1..869 | 17..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:44:45 Download gff for
BO07128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 73..941 | 17..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:53:22 Download gff for
BO07128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 73..941 | 17..885 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:53:22 Download gff for
BO07128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8310255..8311123 | 17..885 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:44:45 Download gff for
BO07128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8310255..8311123 | 17..885 | 99 | | Minus |
BO07128.complete Sequence
1126 bp (1126 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630678
> BO07128.complete
GAAGTTATCAGTCGACATGACAACTGGAAGCGATGCTGACGGGGATGGTG
ACCACCAGGGCAACAATGACATCGTCCCAAATCCAGAACATCCTCCGGAG
ATAATAGACATCTTCAAATCCTTGGCCGAAAACAATCAAATCGTCTTTAA
GTCGCAGCAAATTGATGATCCGGAAATTCCGGTCGAAGAGAAGCAACAAA
TAGCACGAGATGCCTTCGATAAGAACCGTGAGAACTTTCTCATCCGATTT
GGAGGCTTCCTGAATGTAAGACAACTGGGTTCCTTCCAGGAACTGGCTGT
CAAGGAACCCATTAAAGCAGATGAAAATCTGGAGGAGATGTGCCTGCTGC
TAGAGGATTTTAGGAGGAAACTCAACACTCGTGCGGTATCCATTAAAAAC
CGAAGATACCATGCCATGCAGCAGCTCCTTGACAAGGGAGAATACTTTAG
CGAACACGAGATGATGCAAAGGGCGCCGGATCTCTACCAGGAGCTAGTGG
GTCAGTACCTAACGGAGGCGGAAAAGAAGGCTCGGGATAGTTACGATGTT
CGGAATACTAGCTTCTCAGGAATACTAATGCATACGTTGGAGAAAAAGCA
AAGAGATGAATTACTAGAGGAAACGCAGCAGGAAGGAAAGCAGAGCGTGC
AGGTCACAAGTGAATCCAATCCTCAGGCAGACTGTGACGTTCCTGTCGCT
TGCCGAAAGCAGTGGGGTGGATTTGAAGATGATGAACCAGTGGCCTGTTC
AACGAGTCGAAATGCGGAAGTCCGAGCTCCAATGAATACAACTATGATCT
CCACACCGGAGTTCTATAATCCTGGAGAGCGAGAACTACTACGCAATGAG
TTCTTGAGTATGATGAAGGAACGCTTTCTTAGTGGCGAAGACAAGGATTT
TGATTATAAGGCCGTAGATGATAACACTTTGCTGGATGATCTGAAGCAAA
TTGAGCAGGATGAAGAAGATGCCTACTTTGAGGATAGCGAGGACGAGGAG
GAATTGGAGGAGCATGCTGCGGATGAGAATGCTATATCTAGCGAAGATGA
CTTGGATATCTACATGAGGCATCTAAGCAATCATCACAGTCTCCAGAATA
GTCACGGAGCAAGCTTTCTAGACCAT
BO07128.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:56:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-RA | 1095 | CG7810-PA | 1..1092 | 17..1108 | 5460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-RA | 1320 | CG7810-RA | 73..1164 | 17..1108 | 5460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8310032..8311123 | 1108..17 | 5460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:56:07 has no hits.
BO07128.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:59 Download gff for
BO07128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 1..1095 | 17..1112 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:10 Download gff for
BO07128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 22..1116 | 17..1112 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:34:57 Download gff for
BO07128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 73..1164 | 17..1110 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:59 Download gff for
BO07128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 22..1116 | 17..1112 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:56:10 Download gff for
BO07128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 73..1164 | 17..1110 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:10 Download gff for
BO07128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8310030..8311123 | 17..1110 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:34:57 Download gff for
BO07128.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8310030..8311123 | 17..1110 | 99 | | Minus |
BO07128.pep Sequence
Translation from 16 to 1126
> BO07128.pep
MTTGSDADGDGDHQGNNDIVPNPEHPPEIIDIFKSLAENNQIVFKSQQID
DPEIPVEEKQQIARDAFDKNRENFLIRFGGFLNVRQLGSFQELAVKEPIK
ADENLEEMCLLLEDFRRKLNTRAVSIKNRRYHAMQQLLDKGEYFSEHEMM
QRAPDLYQELVGQYLTEAEKKARDSYDVRNTSFSGILMHTLEKKQRDELL
EETQQEGKQSVQVTSESNPQADCDVPVACRKQWGGFEDDEPVACSTSRNA
EVRAPMNTTMISTPEFYNPGERELLRNEFLSMMKERFLSGEDKDFDYKAV
DDNTLLDDLKQIEQDEEDAYFEDSEDEEELEEHAADENAISSEDDLDIYM
RHLSNHHSLQNSHGASFLDH
BO07128.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-PA | 364 | CG7810-PA | 1..364 | 1..364 | 1902 | 100 | Plus |