Clone BO07128 Report

Search the DGRC for BO07128

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:71
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG7810-RA
Protein status:BO07128.pep: validated full length
Sequenced Size:1126

Clone Sequence Records

BO07128.3prime Sequence

849 bp (813 high quality bases) assembled on 2005-12-04

> BO07128.3prime
ATGGTCTAGAAAGCTTGCTCCGTGACTATTCTGGAGACTGTGATGATTGC
TTAGATGCCTCATGTAGATATCCAAGTCATCTTCGCTAGATATAGCATTC
TCATCCGCAGCATGCTCCTCCAATTCCTCCTCGTCCTCGCTATCCTCAAA
GTAGGCATCTTCTTCATCCTGCTCAATTTGCTTCAGATCATCCAGCAAAG
TGTTATCATCTACGGCCTTATAATCAAAATCCTTGTCTTCGCCACTAAGA
AAGCGTTCCTTCATCATACTCAAGAACTCATTGCGTAGTAGTTCTCGCTC
TCCAGGATTATAGAACTCCGGTGTGGAGATCATAGTTGTATTCATTGGAG
CTCGGACTTCCGCATTTCGACTCGTTGAACAGGCCACTGGTTCATCATCT
TCAAATCCACCCCACTGCTTTCGGCAAGCGACAGGAACGTCACAGTCTGC
CTGAGGATTGGATTCACTTGTGACCTGCACGCTCTGCTTTCCTTCCTGCT
GCGTTTCCTCTAGTAATTCATCTCTTTGCTTTTTCTCCAACGTATGCATT
AGTATTCCTGAGAAGCTAGTATTCCGAACATCGTAACTATCCCGAGCCTT
CTTTTCCGCCTCCGTTAGGTACTGACCCACTAGCTCCTGGTAGAGATCCG
GCGCCCTTTGCATCATCTCGTGTTCGCTAAAGTATTCTCCCTTGTCAAGG
AGCTGCTGCATGGCATGGTATCTTCGGTTTTTAATGGATACCGCACGAGT
GTTGAGTTTCCTCCTAAAATCCTCTAGCAGCAGGCACATCTCCTCCAGAT
TTTCATCTGCTTTAATGGGTTCCTTGACAGCCAGTTCCTGGAAGGAACC

BO07128.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG7810-PA 1095 CG7810-RA 262..1092 849..19 4155 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:18:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG7810-RA 1320 CG7810-RA 334..1164 849..19 4155 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:18:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8310032..8310862 19..849 4155 100 Plus
Blast to na_te.dros performed on 2015-02-13 16:18:06 has no hits.

BO07128.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:05 Download gff for BO07128.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-PA 262..1095 15..849 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:22 Download gff for BO07128.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-PA 262..1095 15..849 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:10:35 Download gff for BO07128.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 334..1167 15..849 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:33:08 Download gff for BO07128.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 334..1167 15..849 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:33:08 Download gff for BO07128.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8310029..8310862 15..849 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:10:35 Download gff for BO07128.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8310029..8310862 15..849 99   Plus

BO07128.5prime Sequence

885 bp (863 high quality bases) assembled on 2005-12-04

> BO07128.5prime
GAAGTTATCAGTCGACATGACAACTGGAAGCGATGCTGACGGGGATGGTG
ACCACCAGGGCAACAATGACATCGTCCCAAATCCAGAACATCCTCCGGAG
ATAATAGACATCTTCAAATCCTTGGCCGAAAACAATCAAATCGTCTTTAA
GTCGCAGCAAATTGATGATCCGGAAATTCCGGTCGAAGAGAAGCAACAAA
TAGCACGAGATGCCTTCGATAAGAACCGTGAGAACTTTCTCATCCGATTT
GGAGGCTTCCTGAATGTAAGACAACTGGGTTCCTTCCAGGAACTGGCTGT
CAAGGAACCCATTAAAGCAGATGAAAATCTGGAGGAGATGTGCCTGCTGC
TAGAGGATTTTAGGAGGAAACTCAACACTCGTGCGGTATCCATTAAAAAC
CGAAGATACCATGCCATGCAGCAGCTCCTTGACAAGGGAGAATACTTTAG
CGAACACGAGATGATGCAAAGGGCGCCGGATCTCTACCAGGAGCTAGTGG
GTCAGTACCTAACGGAGGCGGAAAAGAAGGCTCGGGATAGTTACGATGTT
CGGAATACTAGCTTCTCAGGAATACTAATGCATACGTTGGAGAAAAAGCA
AAGAGATGAATTACTAGAGGAAACGCAGCAGGAAGGAAAGCAGAGCGTGC
AGGTCACAAGTGAATCCAATCCTCAGGCAGACTGTGACGTTCCTGTCGCT
TGCCGAAAGCAGTGGGGTGGATTTGAAGATGATGAACCAGTGGCCTGTTC
AACGAGTCGAAATGCGGAAGTCCGAGCTCCAATGAATACAACTATGATCT
CCACACCGGAGTTTCTATATCCTGGAGAGCGAGAACTACTACGCAATGAG
TTCTTGAGTATGATGAAGGAACGCTTTCTTAGTGG

BO07128.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG7810-PA 1095 CG7810-RA 1..797 17..813 3985 100 Plus
CG7810-PA 1095 CG7810-RA 803..869 819..885 335 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:00:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG7810-RA 1320 CG7810-RA 73..941 17..885 4300 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8310255..8311123 885..17 4270 99.4 Minus
Blast to na_te.dros performed on 2015-02-12 00:00:19 has no hits.

BO07128.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:06 Download gff for BO07128.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-PA 1..869 17..885 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:23 Download gff for BO07128.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-PA 1..869 17..885 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:44:45 Download gff for BO07128.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 73..941 17..885 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:53:22 Download gff for BO07128.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 73..941 17..885 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:53:22 Download gff for BO07128.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8310255..8311123 17..885 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:44:45 Download gff for BO07128.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8310255..8311123 17..885 99   Minus

BO07128.complete Sequence

1126 bp (1126 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630678

> BO07128.complete
GAAGTTATCAGTCGACATGACAACTGGAAGCGATGCTGACGGGGATGGTG
ACCACCAGGGCAACAATGACATCGTCCCAAATCCAGAACATCCTCCGGAG
ATAATAGACATCTTCAAATCCTTGGCCGAAAACAATCAAATCGTCTTTAA
GTCGCAGCAAATTGATGATCCGGAAATTCCGGTCGAAGAGAAGCAACAAA
TAGCACGAGATGCCTTCGATAAGAACCGTGAGAACTTTCTCATCCGATTT
GGAGGCTTCCTGAATGTAAGACAACTGGGTTCCTTCCAGGAACTGGCTGT
CAAGGAACCCATTAAAGCAGATGAAAATCTGGAGGAGATGTGCCTGCTGC
TAGAGGATTTTAGGAGGAAACTCAACACTCGTGCGGTATCCATTAAAAAC
CGAAGATACCATGCCATGCAGCAGCTCCTTGACAAGGGAGAATACTTTAG
CGAACACGAGATGATGCAAAGGGCGCCGGATCTCTACCAGGAGCTAGTGG
GTCAGTACCTAACGGAGGCGGAAAAGAAGGCTCGGGATAGTTACGATGTT
CGGAATACTAGCTTCTCAGGAATACTAATGCATACGTTGGAGAAAAAGCA
AAGAGATGAATTACTAGAGGAAACGCAGCAGGAAGGAAAGCAGAGCGTGC
AGGTCACAAGTGAATCCAATCCTCAGGCAGACTGTGACGTTCCTGTCGCT
TGCCGAAAGCAGTGGGGTGGATTTGAAGATGATGAACCAGTGGCCTGTTC
AACGAGTCGAAATGCGGAAGTCCGAGCTCCAATGAATACAACTATGATCT
CCACACCGGAGTTCTATAATCCTGGAGAGCGAGAACTACTACGCAATGAG
TTCTTGAGTATGATGAAGGAACGCTTTCTTAGTGGCGAAGACAAGGATTT
TGATTATAAGGCCGTAGATGATAACACTTTGCTGGATGATCTGAAGCAAA
TTGAGCAGGATGAAGAAGATGCCTACTTTGAGGATAGCGAGGACGAGGAG
GAATTGGAGGAGCATGCTGCGGATGAGAATGCTATATCTAGCGAAGATGA
CTTGGATATCTACATGAGGCATCTAAGCAATCATCACAGTCTCCAGAATA
GTCACGGAGCAAGCTTTCTAGACCAT

BO07128.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:56:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG7810-RA 1095 CG7810-PA 1..1092 17..1108 5460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG7810-RA 1320 CG7810-RA 73..1164 17..1108 5460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8310032..8311123 1108..17 5460 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:56:07 has no hits.

BO07128.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:59 Download gff for BO07128.complete
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 1..1095 17..1112 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:10 Download gff for BO07128.complete
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 22..1116 17..1112 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:34:57 Download gff for BO07128.complete
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 73..1164 17..1110 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:59 Download gff for BO07128.complete
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 22..1116 17..1112 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:56:10 Download gff for BO07128.complete
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 73..1164 17..1110 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:10 Download gff for BO07128.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8310030..8311123 17..1110 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:34:57 Download gff for BO07128.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8310030..8311123 17..1110 99   Minus

BO07128.pep Sequence

Translation from 16 to 1126

> BO07128.pep
MTTGSDADGDGDHQGNNDIVPNPEHPPEIIDIFKSLAENNQIVFKSQQID
DPEIPVEEKQQIARDAFDKNRENFLIRFGGFLNVRQLGSFQELAVKEPIK
ADENLEEMCLLLEDFRRKLNTRAVSIKNRRYHAMQQLLDKGEYFSEHEMM
QRAPDLYQELVGQYLTEAEKKARDSYDVRNTSFSGILMHTLEKKQRDELL
EETQQEGKQSVQVTSESNPQADCDVPVACRKQWGGFEDDEPVACSTSRNA
EVRAPMNTTMISTPEFYNPGERELLRNEFLSMMKERFLSGEDKDFDYKAV
DDNTLLDDLKQIEQDEEDAYFEDSEDEEELEEHAADENAISSEDDLDIYM
RHLSNHHSLQNSHGASFLDH

BO07128.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG7810-PA 364 CG7810-PA 1..364 1..364 1902 100 Plus