Clone BO07132 Report

Search the DGRC for BO07132

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:71
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG12200-RA
Protein status:BO07132.pep: validated full length
Sequenced Size:667

Clone Sequence Records

BO07132.3prime Sequence

665 bp (664 high quality bases) assembled on 2005-12-04

> BO07132.3prime
ATGGTCTAGAAAGCTTGCAAGACGAAAGCCTTTAGTGTCGCTGCCAAAAG
ATCTTCTCCGCGTTGACTGGGTATCCAAGTCCGCGGACCGGCGGGAGCTA
TCAGAAGGCATATCCGACGGCGATTTGTCCGAAGTGCTGATAGAGGTGTT
CCAGGCCTCCTTGAACTCCGGCGTATGGAATCTCTCACCTGCACTGTGCC
GGCGCCTCGTCATCCTCTGCGCATTCTCGTGGTAAGCGATGTAGGTGCGC
AATTCAGCGATTCGCTTCTTTTCCTCCACGACCTTCTGGTTCAGCTGCGC
CTCCATCTTGCAAAAGCCCTCCAGCTGGCGCTTGTTTTGCTCCAGCTGCT
GCAACTGACGGTAGAAACCCAGGTTGTCCGATGCTCGCTGGTCCGCTTGG
AACTTGGAGATCTTGCGGTAGATCTGCTGGAATCGCAGGGGATCCGCGAA
GTAGTTGGCCACGCTAGTTGGCATATCCCGGTTGATCTGGATCGCTTTGA
GCACCTGGCCGCATAGCGGGCAGTTCTTTTCTAGCGAGGATTGGCCCAAA
CAGGGGCCGCAGATCACGTGCCGGCACTGGGTCAAGTGGAAGGGCACGGC
TGGATCAGTTTTGCGATGACGGAAACACTTGTTGCAATGCACTCGAAACA
TGTCGACTGATAACT

BO07132.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG12200-PA 636 CG12200-RA 1..633 651..19 3165 100 Minus
CG31053-PA 660 CG31053-RA 217..290 435..362 195 90.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:04:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG12200-RA 993 CG12200-RA 105..737 651..19 3165 100 Minus
CG31053-RA 818 CG31053-RA 19..431 651..239 535 75.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19475167..19475799 651..19 3165 100 Minus
3R 32079331 3R 27927744..27928156 239..651 535 75.3 Plus
Blast to na_te.dros performed on 2015-02-11 17:04:18 has no hits.

BO07132.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:11 Download gff for BO07132.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12200-PA 1..636 18..651 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:30 Download gff for BO07132.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12200-PA 1..636 18..651 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:42:13 Download gff for BO07132.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12200-RA 94..737 19..662 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:06:12 Download gff for BO07132.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12200-RA 94..737 19..662 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:06:12 Download gff for BO07132.3prime
Subject Subject Range Query Range Percent Splice Strand
X 19475156..19475799 19..662 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:42:13 Download gff for BO07132.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19369189..19369832 19..662 99   Minus

BO07132.5prime Sequence

665 bp (664 high quality bases) assembled on 2005-12-03

> BO07132.5prime
GAAGTTATCAGTCGACATGTTTCGAGTGCATTGCAACAAGTGTTTCCGTC
ATCGCAAAACTGATCCAGCCGTGCCCTTCCACTTGACCCAGTGCCGGCAC
GTGATCTGCGGCCCCTGTTTGGGCCAATCCTCGCTAGAAAAGAACTGCCC
GCTATGCGGCCAGGTGCTCAAAGCGATCCAGATCAACCGGGATATGCCAA
CTAGCGTGGCCAACTACTTCGCGGATCCCCTGCGATTCCAGCAGATCTAC
CGCAAGATCTCCAAGTTCCAAGCGGACCAGCGAGCATCGGACAACCTGGG
TTTCTACCGTCAGTTGCAGCAGCTGGAGCAAAACAAGCGCCAGCTGGAGG
GCTTTTGCAAGATGGAGGCGCAGCTGAACCAGAAGGTCGTGGAGGAAAAG
AAGCGAATCGCTGAATTGCGCACCTACATCGCTTACCACGAGAATGCGCA
GAGGATGACGAGGCGCCGGCACAGTGCAGGTGAGAGATTCCATACGCCGG
AGTTCAAGGAGGCCTGGAACACCTCTATCAGCACTTCGGACAAATCGCCG
TCGGATATGCCTTCTGATAGCTCCCGCCGGTCCGCGGACTTGGATACCCA
GTCAACGCGGAGAAGATCTTTTGGCAGCGACACTAAAGGCTTTCGTCTTG
CAAGCTTTCTAGACC

BO07132.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG12200-PA 636 CG12200-RA 1..633 17..649 3165 100 Plus
CG31053-PA 660 CG31053-RA 217..290 233..306 195 90.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG12200-RA 993 CG12200-RA 105..737 17..649 3165 100 Plus
CG31053-RA 818 CG31053-RA 19..431 17..429 535 75.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19475167..19475799 17..649 3165 100 Plus
3R 32079331 3R 27927744..27928156 429..17 535 75.3 Minus
Blast to na_te.dros performed on 2015-02-11 05:09:47 has no hits.

BO07132.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:11 Download gff for BO07132.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12200-PA 1..636 17..650 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:31 Download gff for BO07132.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12200-PA 1..636 17..650 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:12 Download gff for BO07132.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12200-RA 94..737 6..649 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:34:46 Download gff for BO07132.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12200-RA 94..737 6..649 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:34:46 Download gff for BO07132.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19475156..19475799 6..649 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:12 Download gff for BO07132.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19369189..19369832 6..649 99   Plus

BO07132.complete Sequence

667 bp (667 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630680

> BO07132.complete
GAAGTTATCAGTCGACATGTTTCGAGTGCATTGCAACAAGTGTTTCCGTC
ATCGCAAAACTGATCCAGCCGTGCCCTTCCACTTGACCCAGTGCCGGCAC
GTGATCTGCGGCCCCTGTTTGGGCCAATCCTCGCTAGAAAAGAACTGCCC
GCTATGCGGCCAGGTGCTCAAAGCGATCCAGATCAACCGGGATATGCCAA
CTAGCGTGGCCAACTACTTCGCGGATCCCCTGCGATTCCAGCAGATCTAC
CGCAAGATCTCCAAGTTCCAAGCGGACCAGCGAGCATCGGACAACCTGGG
TTTCTACCGTCAGTTGCAGCAGCTGGAGCAAAACAAGCGCCAGCTGGAGG
GCTTTTGCAAGATGGAGGCGCAGCTGAACCAGAAGGTCGTGGAGGAAAAG
AAGCGAATCGCTGAATTGCGCACCTACATCGCTTACCACGAGAATGCGCA
GAGGATGACGAGGCGCCGGCACAGTGCAGGTGAGAGATTCCATACGCCGG
AGTTCAAGGAGGCCTGGAACACCTCTATCAGCACTTCGGACAAATCGCCG
TCGGATATGCCTTCTGATAGCTCCCGCCGGTCCGCGGACTTGGATACCCA
GTCAACGCGGAGAAGATCTTTTGGCAGCGACACTAAAGGCTTTCGTCTTG
CAAGCTTTCTAGACCAT

BO07132.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:24:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG12200-RA 636 CG12200-PA 1..633 17..649 3165 100 Plus
CG31053-RA 660 CG31053-PA 1..413 17..429 535 75.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:24:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG12200-RA 993 CG12200-RA 105..737 17..649 3165 100 Plus
CG31053-RA 818 CG31053-RA 19..431 17..429 535 75.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:24:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19475167..19475799 17..649 3165 100 Plus
3R 32079331 3R 27927744..27928156 429..17 535 75.3 Minus
Blast to na_te.dros performed on 2014-11-28 00:24:55 has no hits.

BO07132.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:11:26 Download gff for BO07132.complete
Subject Subject Range Query Range Percent Splice Strand
CG12200-RA 1..636 17..650 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:29:39 Download gff for BO07132.complete
Subject Subject Range Query Range Percent Splice Strand
CG12200-RA 30..673 6..649 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:51:44 Download gff for BO07132.complete
Subject Subject Range Query Range Percent Splice Strand
CG12200-RA 111..737 23..651 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:11:26 Download gff for BO07132.complete
Subject Subject Range Query Range Percent Splice Strand
CG12200-RA 30..673 6..649 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:20:02 Download gff for BO07132.complete
Subject Subject Range Query Range Percent Splice Strand
CG12200-RA 111..737 23..651 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:20:02 Download gff for BO07132.complete
Subject Subject Range Query Range Percent Splice Strand
X 19475173..19475799 23..651 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:51:44 Download gff for BO07132.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19369206..19369832 23..651 99   Plus

BO07132.pep Sequence

Translation from 16 to 667

> BO07132.pep
MFRVHCNKCFRHRKTDPAVPFHLTQCRHVICGPCLGQSSLEKNCPLCGQV
LKAIQINRDMPTSVANYFADPLRFQQIYRKISKFQADQRASDNLGFYRQL
QQLEQNKRQLEGFCKMEAQLNQKVVEEKKRIAELRTYIAYHENAQRMTRR
RHSAGERFHTPEFKEAWNTSISTSDKSPSDMPSDSSRRSADLDTQSTRRR
SFGSDTKGFRLASFLDH

BO07132.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:36:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG12200-PA 211 CG12200-PA 1..211 1..211 1122 100 Plus
CG31053-PA 219 CG31053-PA 1..219 1..211 555 50 Plus