Clone Sequence Records
BO07132.3prime Sequence
665 bp (664 high quality bases) assembled on 2005-12-04
> BO07132.3prime
ATGGTCTAGAAAGCTTGCAAGACGAAAGCCTTTAGTGTCGCTGCCAAAAG
ATCTTCTCCGCGTTGACTGGGTATCCAAGTCCGCGGACCGGCGGGAGCTA
TCAGAAGGCATATCCGACGGCGATTTGTCCGAAGTGCTGATAGAGGTGTT
CCAGGCCTCCTTGAACTCCGGCGTATGGAATCTCTCACCTGCACTGTGCC
GGCGCCTCGTCATCCTCTGCGCATTCTCGTGGTAAGCGATGTAGGTGCGC
AATTCAGCGATTCGCTTCTTTTCCTCCACGACCTTCTGGTTCAGCTGCGC
CTCCATCTTGCAAAAGCCCTCCAGCTGGCGCTTGTTTTGCTCCAGCTGCT
GCAACTGACGGTAGAAACCCAGGTTGTCCGATGCTCGCTGGTCCGCTTGG
AACTTGGAGATCTTGCGGTAGATCTGCTGGAATCGCAGGGGATCCGCGAA
GTAGTTGGCCACGCTAGTTGGCATATCCCGGTTGATCTGGATCGCTTTGA
GCACCTGGCCGCATAGCGGGCAGTTCTTTTCTAGCGAGGATTGGCCCAAA
CAGGGGCCGCAGATCACGTGCCGGCACTGGGTCAAGTGGAAGGGCACGGC
TGGATCAGTTTTGCGATGACGGAAACACTTGTTGCAATGCACTCGAAACA
TGTCGACTGATAACT
BO07132.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12200-PA | 636 | CG12200-RA | 1..633 | 651..19 | 3165 | 100 | Minus |
CG31053-PA | 660 | CG31053-RA | 217..290 | 435..362 | 195 | 90.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:04:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12200-RA | 993 | CG12200-RA | 105..737 | 651..19 | 3165 | 100 | Minus |
CG31053-RA | 818 | CG31053-RA | 19..431 | 651..239 | 535 | 75.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:04:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19475167..19475799 | 651..19 | 3165 | 100 | Minus |
3R | 32079331 | 3R | 27927744..27928156 | 239..651 | 535 | 75.3 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:04:18 has no hits.
BO07132.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:11 Download gff for
BO07132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-PA | 1..636 | 18..651 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:30 Download gff for
BO07132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-PA | 1..636 | 18..651 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:42:13 Download gff for
BO07132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-RA | 94..737 | 19..662 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:06:12 Download gff for
BO07132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-RA | 94..737 | 19..662 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:06:12 Download gff for
BO07132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19475156..19475799 | 19..662 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:42:13 Download gff for
BO07132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19369189..19369832 | 19..662 | 99 | | Minus |
BO07132.5prime Sequence
665 bp (664 high quality bases) assembled on 2005-12-03
> BO07132.5prime
GAAGTTATCAGTCGACATGTTTCGAGTGCATTGCAACAAGTGTTTCCGTC
ATCGCAAAACTGATCCAGCCGTGCCCTTCCACTTGACCCAGTGCCGGCAC
GTGATCTGCGGCCCCTGTTTGGGCCAATCCTCGCTAGAAAAGAACTGCCC
GCTATGCGGCCAGGTGCTCAAAGCGATCCAGATCAACCGGGATATGCCAA
CTAGCGTGGCCAACTACTTCGCGGATCCCCTGCGATTCCAGCAGATCTAC
CGCAAGATCTCCAAGTTCCAAGCGGACCAGCGAGCATCGGACAACCTGGG
TTTCTACCGTCAGTTGCAGCAGCTGGAGCAAAACAAGCGCCAGCTGGAGG
GCTTTTGCAAGATGGAGGCGCAGCTGAACCAGAAGGTCGTGGAGGAAAAG
AAGCGAATCGCTGAATTGCGCACCTACATCGCTTACCACGAGAATGCGCA
GAGGATGACGAGGCGCCGGCACAGTGCAGGTGAGAGATTCCATACGCCGG
AGTTCAAGGAGGCCTGGAACACCTCTATCAGCACTTCGGACAAATCGCCG
TCGGATATGCCTTCTGATAGCTCCCGCCGGTCCGCGGACTTGGATACCCA
GTCAACGCGGAGAAGATCTTTTGGCAGCGACACTAAAGGCTTTCGTCTTG
CAAGCTTTCTAGACC
BO07132.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12200-PA | 636 | CG12200-RA | 1..633 | 17..649 | 3165 | 100 | Plus |
CG31053-PA | 660 | CG31053-RA | 217..290 | 233..306 | 195 | 90.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:09:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12200-RA | 993 | CG12200-RA | 105..737 | 17..649 | 3165 | 100 | Plus |
CG31053-RA | 818 | CG31053-RA | 19..431 | 17..429 | 535 | 75.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:09:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19475167..19475799 | 17..649 | 3165 | 100 | Plus |
3R | 32079331 | 3R | 27927744..27928156 | 429..17 | 535 | 75.3 | Minus |
Blast to na_te.dros performed on 2015-02-11 05:09:47 has no hits.
BO07132.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:11 Download gff for
BO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-PA | 1..636 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:31 Download gff for
BO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-PA | 1..636 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:12 Download gff for
BO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-RA | 94..737 | 6..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:34:46 Download gff for
BO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-RA | 94..737 | 6..649 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:34:46 Download gff for
BO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19475156..19475799 | 6..649 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:12 Download gff for
BO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19369189..19369832 | 6..649 | 99 | | Plus |
BO07132.complete Sequence
667 bp (667 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630680
> BO07132.complete
GAAGTTATCAGTCGACATGTTTCGAGTGCATTGCAACAAGTGTTTCCGTC
ATCGCAAAACTGATCCAGCCGTGCCCTTCCACTTGACCCAGTGCCGGCAC
GTGATCTGCGGCCCCTGTTTGGGCCAATCCTCGCTAGAAAAGAACTGCCC
GCTATGCGGCCAGGTGCTCAAAGCGATCCAGATCAACCGGGATATGCCAA
CTAGCGTGGCCAACTACTTCGCGGATCCCCTGCGATTCCAGCAGATCTAC
CGCAAGATCTCCAAGTTCCAAGCGGACCAGCGAGCATCGGACAACCTGGG
TTTCTACCGTCAGTTGCAGCAGCTGGAGCAAAACAAGCGCCAGCTGGAGG
GCTTTTGCAAGATGGAGGCGCAGCTGAACCAGAAGGTCGTGGAGGAAAAG
AAGCGAATCGCTGAATTGCGCACCTACATCGCTTACCACGAGAATGCGCA
GAGGATGACGAGGCGCCGGCACAGTGCAGGTGAGAGATTCCATACGCCGG
AGTTCAAGGAGGCCTGGAACACCTCTATCAGCACTTCGGACAAATCGCCG
TCGGATATGCCTTCTGATAGCTCCCGCCGGTCCGCGGACTTGGATACCCA
GTCAACGCGGAGAAGATCTTTTGGCAGCGACACTAAAGGCTTTCGTCTTG
CAAGCTTTCTAGACCAT
BO07132.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:24:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12200-RA | 636 | CG12200-PA | 1..633 | 17..649 | 3165 | 100 | Plus |
CG31053-RA | 660 | CG31053-PA | 1..413 | 17..429 | 535 | 75.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:24:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12200-RA | 993 | CG12200-RA | 105..737 | 17..649 | 3165 | 100 | Plus |
CG31053-RA | 818 | CG31053-RA | 19..431 | 17..429 | 535 | 75.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:24:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19475167..19475799 | 17..649 | 3165 | 100 | Plus |
3R | 32079331 | 3R | 27927744..27928156 | 429..17 | 535 | 75.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:24:55 has no hits.
BO07132.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:11:26 Download gff for
BO07132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-RA | 1..636 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:29:39 Download gff for
BO07132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-RA | 30..673 | 6..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:51:44 Download gff for
BO07132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-RA | 111..737 | 23..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:11:26 Download gff for
BO07132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-RA | 30..673 | 6..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:20:02 Download gff for
BO07132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12200-RA | 111..737 | 23..651 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:20:02 Download gff for
BO07132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19475173..19475799 | 23..651 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:51:44 Download gff for
BO07132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19369206..19369832 | 23..651 | 99 | | Plus |
BO07132.pep Sequence
Translation from 16 to 667
> BO07132.pep
MFRVHCNKCFRHRKTDPAVPFHLTQCRHVICGPCLGQSSLEKNCPLCGQV
LKAIQINRDMPTSVANYFADPLRFQQIYRKISKFQADQRASDNLGFYRQL
QQLEQNKRQLEGFCKMEAQLNQKVVEEKKRIAELRTYIAYHENAQRMTRR
RHSAGERFHTPEFKEAWNTSISTSDKSPSDMPSDSSRRSADLDTQSTRRR
SFGSDTKGFRLASFLDH
BO07132.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:36:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12200-PA | 211 | CG12200-PA | 1..211 | 1..211 | 1122 | 100 | Plus |
CG31053-PA | 219 | CG31053-PA | 1..219 | 1..211 | 555 | 50 | Plus |