Clone BO07141 Report

Search the DGRC for BO07141

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:71
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptAats-asp-RA
Protein status:BO07141.pep: validated full length
Sequenced Size:1627

Clone Sequence Records

BO07141.3prime Sequence

947 bp (846 high quality bases) assembled on 2005-12-04

> BO07141.3prime
ATGGTCTAGAAAGCTTGCAGGCGTTAATCGTTTGGGATCGCGCGGGAACA
TGGAAGTCTTGCGGATGTTGTCCAATCCCAGATACAGCATCACCACACGC
TCCATTCCAATGCCACCACCAGCATGTGGAGGACATCCATAGCGGAAGGA
CTCGATGTACGCCGCAATCTTGGAGGTATCAATGCCATGGTGCTTGGCTC
GTTCGATTAAGTACTCGGGATCGTGGATACGCTGCGCGCCGGACAGGATC
TCCTCGCCGCGCATGAACATATCGTAAGAGTTGGAGTAGACCGGATTGTT
TGGATCAGGCATCGTGTAGAAGGGCCGTATCGCTAACGGGAACTTGTCAA
GGATGTAGAAGTCAGTGTCGTACTTGGCCTTGACCAGGCGACCCAACAGC
TTTTCGTTGGGCGTAGACAGATCCTCCTCGTCGCCGGTCTCCACACCAGC
CTCGCGCAACATGGCCACGCCATCGGCGAACTGGAGGATCAGTGGTGGCT
CCAGGAACTTGAAGGCATCCACCTTGTACTGCTGGCCTACAGATTCGATT
TCCTTAGCGTACTTATCACGCAGTCCCTTGAAAATGGACGTAAACGTGTT
GCCAATCGTGTGCAGCACCTCGTGGTAGTGGTACTTAAAGGCCATTTCCA
GATCAAGGCCTACGAACTCGGTCAAATGCCGATGAGTGTTCGAATCCTCT
GCACGGAACACGGCTCCTACGGTATAGACCTTGTCAAAATCGGCGGCGAT
GGCCATCTGCTTGTACAGCTGCGGCGACTGCGCCAGATAGGCTGAATCCT
TGAAGTAGCTCACGGTGAACACATTGGCGCCTCCCTCACTGGCCGCTGAA
ATGATCTTCGGCGTGTGAATCTCTGTGAAGCCCTGCTCAGTGAGAATATC
GCGGAACAGGCGACATACTCCGGCTTCCAGTCNGAAAATGGNCTGAT

BO07141.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG3821-PA 1596 Aats-asp-RA 665..1593 947..19 4607 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-RB 2246 CG3821-RB 1052..1980 947..19 4623 99.8 Minus
Aats-asp-RC 1899 CG3821-RC 705..1633 947..19 4623 99.8 Minus
Aats-asp-RA 1976 CG3821-RA 782..1710 947..19 4623 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12881765..12882532 947..180 3818 99.7 Minus
2R 25286936 2R 12882741..12882902 180..19 810 100 Minus
Blast to na_te.dros performed on 2015-02-13 05:27:12 has no hits.

BO07141.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:30 Download gff for BO07141.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3821-PA 665..1596 15..947 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:56 Download gff for BO07141.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3821-PA 665..1596 15..947 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:02:32 Download gff for BO07141.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 782..1715 13..947 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:58:22 Download gff for BO07141.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 782..1715 13..947 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:58:22 Download gff for BO07141.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12881765..12882532 180..947 99 -> Minus
2R 12882742..12882907 13..179 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:02:32 Download gff for BO07141.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8770247..8770412 13..179 98   Minus
arm_2R 8769270..8770037 180..947 99 -> Minus

BO07141.5prime Sequence

891 bp (825 high quality bases) assembled on 2005-12-04

> BO07141.5prime
GAAGTTATCAGTCGACATGGTCGAGGACAAAGAGCAAGTGGCCAACGGGG
AGCAGGTCTCCAAGAAGGGAGCCAAAAAGCTGGCCAAGGCCGCTAAGAAA
GCCGAACAAAAAGCGGAGAACGCCTCCACCGCGGCGGCCAATAACGCTGG
TGGCGATTCTGCGGAGGATCACGCCGCCGGAAGATATGGCCTCTCGGAAA
TGATCCAATCCAAGGACAAACGCAGTGAACGCAACTTTGTCCCGGTTTCG
GAACTAAGCGGTCAGGTGGGCAAAGGGCTGGTCTGGGTGCGAGGACGCGT
CCACACTTCGAGAGCCAAGGGAAAGCAGTGCTTCCTCATCCTGCGCCAGC
AGAGCAGCACGGTGCAGTGCATCCTGGCTGTCGGTGATGTTATCTCCAAA
CAGATGGTCAAATTTGCGGGAAATATCCCTAAGGAGAGCATTATTGATAT
CCAGGCCAAGCCAGTGGCGGTGTCTAGCAAGATTGAATCCTGCACAGAGC
AGTCGCTGGAATTGTCCGTCGAGCAGATATTCGTAATATCCCAGGCCAAG
GCACAGTTGCCATTGCAAATCGAGGATGCATCGCGTCCCGAGAACGCCGA
TGATGCGGAAGGTCTGAATATTCGCGTGAACCAGGACACGCGCTTGGACA
ACCGAGTGCTCGACCTGAGGACCCCGGCAAATCAGGCCATTTTCCGACTG
GAAGCCGGAGTATGTCGCCTGTTCCGCGATATTCTCACTGAGCAGGGCTT
CACAGAGATTCACACGCCGAAGATCATTTCAGCGGCCAGTGAGGGAGGCG
CCAATGTGTTCACCGTGAGCTACTTCAGGGATCAGCCTATCTGGCGCAGT
CGCCGCAGCTGTACAAGCAGATGGCCATCGCCCGCGATTTT

BO07141.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG3821-PA 1596 Aats-asp-RA 1..811 17..827 4030 99.8 Plus
CG3821-PA 1596 Aats-asp-RA 817..867 832..882 255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:09:44
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-RB 2246 CG3821-RB 388..1263 17..891 4295 99.4 Plus
Aats-asp-RC 1899 CG3821-RC 41..916 17..891 4295 99.4 Plus
Aats-asp-RA 1976 CG3821-RA 118..993 17..891 4295 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12881508..12881976 424..891 2250 99.1 Plus
2R 25286936 2R 12880948..12881275 96..423 1625 99.7 Plus
2R 25286936 2R 12880790..12880870 17..97 405 100 Plus
Blast to na_te.dros performed on 2015-02-12 07:09:43 has no hits.

BO07141.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:31 Download gff for BO07141.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3821-PA 1..876 17..891 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:49:57 Download gff for BO07141.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3821-PA 1..876 17..891 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:35:18 Download gff for BO07141.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 109..993 9..891 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:02:21 Download gff for BO07141.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 109..993 9..891 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:02:21 Download gff for BO07141.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12880781..12880870 9..97 95 -> Plus
2R 12880950..12881275 98..423 99 -> Plus
2R 12881508..12881976 424..891 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:35:18 Download gff for BO07141.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8768286..8768375 9..97 95 -> Plus
arm_2R 8768455..8768780 98..423 99 -> Plus
arm_2R 8769013..8769481 424..891 99   Plus

BO07141.complete Sequence

1627 bp (1627 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630684

> BO07141.complete
GAAGTTATCAGTCGACATGGTCGAGGACAAAGAGCAAGTGGCCAACGGGG
AGCAGGTCTCCAAGAAGGGAGCCAAAAAGCTGGCCAAGGCCGCTAAGAAA
GCCGAACAAAAAGCGGAGAACGCCTCCACCGCGGCGGCCAATAACGCTGG
TGGCGATTCTGCGGAGGATCACGCCGCCGGAAGATATGGCCTCTCGGAAA
TGATCCAATCCAAGGACAAACGCAGTGAACGCAACTTTGTCCCGGTTTCG
GAACTAAGCGGTCAGGTGGGCAAAGGGCTGGTCTGGGTGCGAGGACGCGT
CCACACTTCGAGAGCCAAGGGAAAGCAGTGCTTCCTCATCCTGCGCCAGC
AGAGCAGCACGGTGCAGTGCATCCTGGCTGTCGGTGATGTTATCTCCAAA
CAGATGGTCAAATTTGCGGGAAATATCCCTAAGGAGAGCATTATTGATAT
CCAGGCCAAGCCAGTGGCGGTGTCTAGCAAGATTGAATCCTGCACAGAGC
AGTCGCTGGAATTGTCCGTCGAGCAGATATTCGTAATATCCCAGGCCAAG
GCACAGTTGCCATTGCAAATCGAGGATGCATCGCGTCCCGAGAACGCCGA
TGATGCGGAAGGTCTGAATATTCGCGTGAACCAGGACACGCGCTTGGACA
ACCGAGTGCTCGACCTGAGGACCCCGGCAAATCAGGCCATTTTCCGACTG
GAAGCCGGAGTATGTCGCCTGTTCCGCGATATTCTCACTGAGCAGGGCTT
CACAGAGATTCACACGCCGAAGATCATTTCAGCGGCCAGTGAGGGAGGCG
CCAATGTGTTCACCGTGAGCTACTTCAAGGATTCAGCCTATCTGGCGCAG
TCGCCGCAGCTGTACAAGCAGATGGCCATCGCCGCCGATTTTGACAAGGT
CTATACCGTAGGAGCCGTGTTCCGTGCAGAGGATTCGAACACTCATCGGC
ATTTGACCGAGTTCGTAGGCCTTGATCTGGAAATGGCCTTTAAGTACCAC
TACCACGAGGTGCTGCACACGATTGGCAACACGTTTACGTCCATTTTCAA
GGGACTGCGTGATAAGTACGCTAAGGAAATCGAATCTGTAGGCCAGCAGT
ACAAGGTGGATGCCTTCAAGTTCCTGGAGCCACCACTGATCCTCCAGTTC
GCCGATGGCGTGGCCATGTTGCGCGAGGCTGGTGTGGAGACCGGCGACGA
GGAGGATCTGTCTACGCCCAACGAAAAGCTGTTGGGTCGCCTGGTCAAGG
CCAAGTACGACACTGACTTCTACATCCTTGACAAGTTCCCGTTAGCGATA
CGGCCCTTCTACACGATGCCTGATCCAAACAATCCGGTCTACTCCAACTC
TTACGATATGTTCATGCGCGGCGAGGAGATCCTGTCCGGCGCGCAGCGTA
TCCACGATCCCGAGTACTTAATCGAACGAGCCAAGCACCATGGCATTGAT
ACCTCCAAGATTGCGGCGTACATCGAGTCCTTCCGCTATGGATGTCCTCC
ACATGCTGGTGGTGGCATTGGAATGGAGCGTGTGGTGATGCTGTATCTGG
GATTGGACAACATCCGCAAGACTTCCATGTTCCCGCGCGATCCCAAACGA
TTAACGCCTGCAAGCTTTCTAGACCAT

BO07141.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-RB 1596 CG3821-PB 1..1593 17..1609 7950 99.9 Plus
Aats-asp-RC 1596 CG3821-PC 1..1593 17..1609 7950 99.9 Plus
Aats-asp-RA 1596 CG3821-PA 1..1593 17..1609 7950 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:47:31
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-RB 2246 CG3821-RB 388..1980 17..1609 7950 99.9 Plus
Aats-asp-RC 1899 CG3821-RC 41..1633 17..1609 7950 99.9 Plus
Aats-asp-RA 1976 CG3821-RA 118..1710 17..1609 7950 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:47:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12881508..12882532 424..1448 5125 100 Plus
2R 25286936 2R 12880948..12881275 96..423 1625 99.7 Plus
2R 25286936 2R 12882741..12882902 1448..1609 810 100 Plus
2R 25286936 2R 12880790..12880870 17..97 405 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:47:28 has no hits.

BO07141.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:07 Download gff for BO07141.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1596 17..1613 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:35 Download gff for BO07141.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 74..1680 9..1615 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:01 Download gff for BO07141.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 118..1710 17..1611 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:07 Download gff for BO07141.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 74..1680 9..1615 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:04:44 Download gff for BO07141.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 118..1710 17..1611 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:04:44 Download gff for BO07141.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12880950..12881275 98..423 99 -> Plus
2R 12880790..12880870 17..97 100 -> Plus
2R 12881508..12882532 424..1448 100 -> Plus
2R 12882742..12882902 1449..1611 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:01 Download gff for BO07141.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8768455..8768780 98..423 99 -> Plus
arm_2R 8768295..8768375 17..97 100 -> Plus
arm_2R 8769013..8770037 424..1448 100 -> Plus
arm_2R 8770247..8770407 1449..1611 98   Plus

BO07141.pep Sequence

Translation from 16 to 1627

> BO07141.pep
MVEDKEQVANGEQVSKKGAKKLAKAAKKAEQKAENASTAAANNAGGDSAE
DHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRA
KGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQAKPV
AVSSKIESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENADDAEGL
NIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHT
PKIISAASEGGANVFTVSYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGA
VFRAEDSNTHRHLTEFVGLDLEMAFKYHYHEVLHTIGNTFTSIFKGLRDK
YAKEIESVGQQYKVDAFKFLEPPLILQFADGVAMLREAGVETGDEEDLST
PNEKLLGRLVKAKYDTDFYILDKFPLAIRPFYTMPDPNNPVYSNSYDMFM
RGEEILSGAQRIHDPEYLIERAKHHGIDTSKIAAYIESFRYGCPPHAGGG
IGMERVVMLYLGLDNIRKTSMFPRDPKRLTPASFLDH

BO07141.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-PB 531 CG3821-PB 1..531 1..531 2713 100 Plus
Aats-asp-PC 531 CG3821-PC 1..531 1..531 2713 100 Plus
Aats-asp-PA 531 CG3821-PA 1..531 1..531 2713 100 Plus
Aats-asn-PB 558 CG10687-PB 84..558 15..531 349 25 Plus
Aats-asn-PA 558 CG10687-PA 84..558 15..531 349 25 Plus