Clone Sequence Records
BO07147.3prime Sequence
341 bp (340 high quality bases) assembled on 2005-12-04
> BO07147.3prime
ATGGTCTAGAAAGCTTGCCTTTAGGTTCACCTTGATTTCGAAGGTCTTGT
AGGTGTATTCCTGGATGACTTTCAGATTCTTAATAATGAACTCCTTGATG
GCCTGCACGTAATCGGCGGCGGCCAGGATGAGCTTCTTAAAGGCATCGAT
CACCTTGCCCTCGCCCTCCAGACGACCCTTGAACTTCTCCTCCGACACCT
GGGCAATGAATCCCCGCAGTCCCAGTGCATTGGCCTGGACCAGTGCAAAC
AGCTCGAAAGCATCCTTGGGCACCCTGCCACGCACCTCAAAGTCACAGCA
CAAGATCTCCTCCTTTTGGCCTGCCATGTCGACTGATAACT
BO07147.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-PA | 312 | CG10970-RA | 1..309 | 327..19 | 1545 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 14:56:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-RB | 1810 | CG10970-RB | 1339..1652 | 332..19 | 1555 | 99.7 | Minus |
CG10970-RA | 589 | CG10970-RA | 121..434 | 332..19 | 1555 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 14:56:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9069757..9070070 | 19..332 | 1555 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-10 14:56:42 has no hits.
BO07147.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:40 Download gff for
BO07147.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-PA | 1..312 | 16..327 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:50:10 Download gff for
BO07147.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-PA | 1..312 | 16..327 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:04:41 Download gff for
BO07147.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 22..339 | 19..339 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:11:00 Download gff for
BO07147.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 117..434 | 19..339 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:11:00 Download gff for
BO07147.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9069757..9070074 | 19..339 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:04:41 Download gff for
BO07147.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8963790..8964107 | 19..339 | 98 | | Plus |
BO07147.5prime Sequence
341 bp (340 high quality bases) assembled on 2005-12-04
> BO07147.5prime
GAAGTTATCAGTCGACATGGCAGGCCAAAAGGAGGAGATCTTGTGCTGTG
ACTTTGAGGTGCGTGGCAGGGTGCCCAAGGATGCTTTCGAGCTGTTTGCA
CTGGTCCAGGCCAATGCACTGGGACTGCGGGGATTCATTGCCCAGGTGTC
GGAGGAGAAGTTCAAGGGTCGTCTGGAGGGCGAGGGCAAGGTGATCGATG
CCTTTAAGAAGCTCATCCTGGCCGCCGCCGATTACGTGCAGGCCATCAAG
GAGTTCATTATTAAGAATCTGAAAGTCATCCAGGAATACACCTACAAGAC
CTTCGAAATCAAGGTGAACCTAAAGGCAAGCTTTCTAGACC
BO07147.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-PA | 312 | CG10970-RA | 1..309 | 17..325 | 1545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:10:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-RB | 1810 | CG10970-RB | 1339..1652 | 12..325 | 1555 | 99.7 | Plus |
CG10970-RA | 589 | CG10970-RA | 121..434 | 12..325 | 1555 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:09:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9069757..9070070 | 325..12 | 1555 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-11 05:09:59 has no hits.
BO07147.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:40 Download gff for
BO07147.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-PA | 1..312 | 17..328 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:50:11 Download gff for
BO07147.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-PA | 1..312 | 17..328 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:16 Download gff for
BO07147.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 22..339 | 5..325 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:35:05 Download gff for
BO07147.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 117..434 | 5..325 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:05 Download gff for
BO07147.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9069757..9070074 | 5..325 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:16 Download gff for
BO07147.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8963790..8964107 | 5..325 | 98 | | Minus |
BO07147.complete Sequence
343 bp (343 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630687
> BO07147.complete
GAAGTTATCAGTCGACATGGCAGGCCAAAAGGAGGAGATCTTGTGCTGTG
ACTTTGAGGTGCGTGGCAGGGTGCCCAAGGATGCTTTCGAGCTGTTTGCA
CTGGTCCAGGCCAATGCACTGGGACTGCGGGGATTCATTGCCCAGGTGTC
GGAGGAGAAGTTCAAGGGTCGTCTGGAGGGCGAGGGCAAGGTGATCGATG
CCTTTAAGAAGCTCATCCTGGCCGCCGCCGATTACGTGCAGGCCATCAAG
GAGTTCATTATTAAGAATCTGAAAGTCATCCAGGAATACACCTACAAGAC
CTTCGAAATCAAGGTGAACCTAAAGGCAAGCTTTCTAGACCAT
BO07147.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-RB | 312 | CG10970-PB | 1..309 | 17..325 | 1545 | 100 | Plus |
CG10970-RA | 312 | CG10970-PA | 1..309 | 17..325 | 1545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:20:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-RB | 1810 | CG10970-RB | 1339..1652 | 12..325 | 1555 | 99.7 | Plus |
CG10970-RA | 589 | CG10970-RA | 121..434 | 12..325 | 1555 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:20:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9069757..9070070 | 325..12 | 1555 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:20:28 has no hits.
BO07147.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:18:10 Download gff for
BO07147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 1..312 | 17..328 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:05:04 Download gff for
BO07147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 1335..1652 | 5..325 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:52:04 Download gff for
BO07147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 31..339 | 17..327 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:18:11 Download gff for
BO07147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 1335..1652 | 5..325 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:16:19 Download gff for
BO07147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 126..434 | 17..327 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:16:19 Download gff for
BO07147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9069754..9070065 | 17..327 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:52:04 Download gff for
BO07147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8963787..8964098 | 17..327 | 99 | | Minus |
BO07147.pep Sequence
Translation from 16 to 343
> BO07147.pep
MAGQKEEILCCDFEVRGRVPKDAFELFALVQANALGLRGFIAQVSEEKFK
GRLEGEGKVIDAFKKLILAAADYVQAIKEFIIKNLKVIQEYTYKTFEIKV
NLKASFLDH
BO07147.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:43:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-PB | 103 | CG10970-PB | 1..103 | 1..103 | 514 | 100 | Plus |
CG10970-PA | 103 | CG10970-PA | 1..103 | 1..103 | 514 | 100 | Plus |