Clone Sequence Records
BO07150.3prime Sequence
885 bp (843 high quality bases) assembled on 2005-12-04
> BO07150.3prime
ATGGTCTAGAAAGCTTGCTAGCGAACCAGCCGGAAAACTTGTTGAACTAT
TGCTATGGGCTAAACTAATCATTGAACCAGACAGACTTCCCTCCTCATCT
GCATAGGCTTCTCGGGATACCTCAATCAGAGATAAAGTGCTGAAACCTAG
GGCAATTGATTCGTTATCAAATGCTTCCAATTCTTTAGTATGCTTCTCGT
GTTTCATGCGCAAGCGCTCGGCGCGTTCCTGGTTGAATTGCTGCAACTCG
GCGTCCATCTTATTCTCGAGCAGGCCACGCCGCACGCTGACGCGATTCTC
GAGCTCACGACGCTCGCGATCGCGCTGCTCCTGTGCCTGCTTCTTGTTCT
TGTTCTGGTAGGCAGTGAGCATCTCCAGCTCGTACTCCAGCTGCTCGTGG
GTACGTTGGCACTCAATCACTTGGCTTTCGTCTAGTTTGTAGCTCTGACT
TTGGAACATGTCCGCAATGCTTTGCTCGTACTGTTCACCGAGCAGCGTCA
GCTTGCGATGCTTCTCTTCCTTCAGCTGCTTAATGACCTCCTTCTGTTGC
TCCTTTGGTGTCGTCTGCAGTACTTGGGCCTTGTAGCGTTTGTATTGCTT
CGTCTGCGTCTTGCATGTTTCCCGGAACTGCTTGCGTATCTGGAGCTCCT
TTTGCTTCAAGCTCTTCGGCTGTTGCCTCAGCTCAACCGCATGCTTGCGT
ACCAGCTCCTTCTTGATGCGGTCCATGTAGTCTTTTTGATTATGCAACTC
GGTATCGTGTTGCTTGTTTATCTGCTCCTCGCGCAACTGGTGCACGCTCT
TCTGCTGGCGGTACTCCAGCTCCTGTGTCTTTTCGTGGTGCTTAAGAAGC
ATGGCGTGTGCCTGCTGCAGTTGCTGCTCCTTCTT
BO07150.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14217-PE | 3120 | Tao-1-RE | 2251..3117 | 885..19 | 4335 | 100 | Minus |
CG14217-PD | 3120 | Tao-1-RD | 2251..3117 | 885..19 | 4335 | 100 | Minus |
CG14217-PB | 1410 | Tao-1-RB | 541..1407 | 885..19 | 4335 | 100 | Minus |
CG14217-PA | 1479 | Tao-1-RA | 610..1476 | 885..19 | 4335 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:30:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tao-RI | 4230 | CG14217-RI | 2949..3815 | 885..19 | 4335 | 100 | Minus |
Tao-RG | 2621 | CG14217-RG | 818..1684 | 885..19 | 4335 | 100 | Minus |
Tao-RF | 5483 | CG14217-RF | 2754..3620 | 885..19 | 4335 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:30:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19571962..19572190 | 255..483 | 1130 | 99.6 | Plus |
X | 23542271 | X | 19572252..19572427 | 481..656 | 880 | 100 | Plus |
X | 23542271 | X | 19571584..19571707 | 19..142 | 620 | 100 | Plus |
X | 23542271 | X | 19571775..19571895 | 140..260 | 605 | 100 | Plus |
X | 23542271 | X | 19572497..19572617 | 655..775 | 605 | 100 | Plus |
X | 23542271 | X | 19572678..19572791 | 772..885 | 570 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 03:30:54 has no hits.
BO07150.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:45 Download gff for
BO07150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-1-PA | 610..1479 | 18..885 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:50:18 Download gff for
BO07150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14217-PA | 610..1479 | 18..885 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:54:53 Download gff for
BO07150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-RF | 2762..3632 | 13..885 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:27:42 Download gff for
BO07150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-RF | 2754..3624 | 13..885 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:27:42 Download gff for
BO07150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19572497..19572613 | 655..771 | 100 | <- | Plus |
X | 19572678..19572791 | 772..885 | 100 | | Plus |
X | 19571580..19571704 | 13..139 | 97 | <- | Plus |
X | 19571775..19571893 | 140..258 | 100 | <- | Plus |
X | 19571966..19572187 | 259..480 | 100 | <- | Plus |
X | 19572252..19572425 | 481..654 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:54:53 Download gff for
BO07150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19465613..19465737 | 13..139 | 97 | <- | Plus |
arm_X | 19465808..19465926 | 140..258 | 100 | <- | Plus |
arm_X | 19465999..19466220 | 259..480 | 100 | <- | Plus |
arm_X | 19466285..19466458 | 481..654 | 100 | <- | Plus |
arm_X | 19466530..19466646 | 655..771 | 100 | <- | Plus |
arm_X | 19466711..19466824 | 772..885 | 100 | | Plus |
BO07150.5prime Sequence
945 bp (771 high quality bases) assembled on 2005-12-03
> BO07150.5prime
GAAGTTATCAGTCGACATGTTTTGGCCGAGATTTGCGCCCGTTGAGGTTA
TGGTTGAGCTGGAGTTCGGCAGCGGTTTTGAGGAGATGCACGAACAGATG
TCCGGCTACAAGCGGATGCGGCGCGAGCACCAGGCGCACCTGGTCAAACT
GGAGGAGAAGTGCAAGGTGGACATGGAGGCGCACAAGACGGCCCTGGACA
AGGAGTATGACACGCTGCTCCACAACTTTACGAGGGACCTCGATCGGCTT
GAGACGAAGCATCAGCAGGATGTGGAGAGGCGCGCTAAGCAAACGAGCGC
CGCCGAGAAGAAACTACACAAAGAGATTACGCTAAAGCAGGAGAACGATC
GCAAGGTGTACGACCTGAACCGCAAGAAGGAGTACAAGGCGAACAAGGAG
CGCTGGAAGCGGGAGCTCTCCATGGATGAGTCGACGCCCAAGCGGCAGCG
CGATCTTACCCTGCAATCGCAGAAGGACAACCTCAAGCAGCACGAGGCGC
AGGAGGAGCAGCGCATGCTCCAGGCCCAGAAGCAGTACATCGAGCTGGAG
ATGCGCAAGTTCAAGCGCAAACGGATGATCATGCAGCACGAGCACGAGGA
TCAGCAGCTGCGCGACGAGCTCGGAAAGAAGGAGCAGCAACTGCAGCAGG
CACACGCCATGCTTCTTAAGCACCACGAAAAGACACAGGAGCTGGAGTAC
CGCCAGCAGAAGAGCGTGCACCAGTTGCGCGAGGAGCAGATAAACAAGCA
ACACGATACCGAGTTGCATAATCAAAAAGACTACATGGACCGCATCAAGA
AGGAGCTGGTACGCAAGCATGCGGTTGAGCTGAGGCAACAGCCGAAGAGC
TTGAAGCAAAAGGAGCTCCAGATACGCAAGCAGTTCCGGGAAACATGCAA
GACGCAGACGAAGCAATACAAACGCTACAAGGCCCCAGTACTGCA
BO07150.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14217-PA | 1479 | Tao-1-RA | 1..929 | 17..945 | 4620 | 99.8 | Plus |
CG14217-PE | 3120 | Tao-1-RE | 1705..2570 | 80..945 | 4305 | 99.8 | Plus |
CG14217-PD | 3120 | Tao-1-RD | 1705..2570 | 80..945 | 4305 | 99.8 | Plus |
CG14217-PB | 1410 | Tao-1-RB | 1..860 | 86..945 | 4275 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 09:56:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tao-RG | 2621 | CG14217-RG | 209..1137 | 17..945 | 4630 | 99.9 | Plus |
Tao-RA | 2099 | CG14217-RA | 209..1137 | 17..945 | 4630 | 99.9 | Plus |
Tao-RI | 4230 | CG14217-RI | 2403..3268 | 80..945 | 4315 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 09:56:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19572865..19573230 | 617..252 | 1830 | 100 | Minus |
X | 23542271 | X | 19573291..19573464 | 253..80 | 870 | 100 | Minus |
X | 23542271 | X | 19572678..19572800 | 739..617 | 615 | 100 | Minus |
X | 23542271 | X | 19572497..19572617 | 856..736 | 605 | 100 | Minus |
X | 23542271 | X | 19572337..19572427 | 945..855 | 440 | 98.9 | Minus |
X | 23542271 | X | 19573603..19573666 | 80..17 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 09:56:10 has no hits.
BO07150.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:46 Download gff for
BO07150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-1-PA | 1..928 | 17..944 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:50:19 Download gff for
BO07150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14217-PA | 1..928 | 17..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:43:49 Download gff for
BO07150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-RA | 173..1105 | 10..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:54:57 Download gff for
BO07150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-RA | 204..1136 | 10..944 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:54:57 Download gff for
BO07150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19573291..19573464 | 80..253 | 100 | <- | Minus |
X | 19573604..19573671 | 10..79 | 95 | | Minus |
X | 19572338..19572425 | 857..944 | 98 | <- | Minus |
X | 19572497..19572613 | 740..856 | 100 | <- | Minus |
X | 19572678..19572800 | 617..739 | 100 | <- | Minus |
X | 19572866..19573228 | 254..616 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:43:49 Download gff for
BO07150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19466371..19466458 | 857..944 | 98 | <- | Minus |
arm_X | 19466530..19466646 | 740..856 | 100 | <- | Minus |
arm_X | 19466711..19466833 | 617..739 | 100 | <- | Minus |
arm_X | 19466899..19467261 | 254..616 | 100 | <- | Minus |
arm_X | 19467324..19467497 | 80..253 | 100 | <- | Minus |
arm_X | 19467637..19467704 | 10..79 | 95 | | Minus |
BO07150.complete Sequence
1510 bp (1510 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630688
> BO07150.complete
GAAGTTATCAGTCGACATGTTTTGGCCGAGATTTGCGCCCGTTGAGGTTA
TGGTTGAGCTGGAGTTCGGCAGCGGTTTTGAGGAGATGCACGAACAGATG
TCCGGCTACAAGCGGATGCGGCGCGAGCACCAGGCGCACCTGGTCAAACT
GGAGGAGAAGTGCAAGGTGGACATGGAGGCGCACAAGACGGCCCTGGACA
AGGAGTATGACACGCTGCTCCACAACTTTACGAGGGACCTCGATCGGCTT
GAGACGAAGCATCAGCAGGATGTGGAGAGGCGCGCTAAGCAAACGAGCGC
CGCCGAGAAGAAACTACACAAAGAGATTACGCTAAAGCAGGAGAACGATC
GCAAGGTGTACGACCTGAACCGCAAGAAGGAGTACAAGGCGAACAAGGAG
CGCTGGAAGCGGGAGCTCTCCATGGATGAGTCGACGCCCAAGCGGCAGCG
CGATCTTACCCTGCAATCGCAGAAGGACAACCTCAAGCAGCACGAGGCGC
AGGAGGAGCAGCGCATGCTCCAGGCCCAGAAGCAGTACATCGAGCTGGAG
ATGCGCAAGTTCAAGCGCAAACGGATGATCATGCAGCACGAGCACGAGGA
TCAGCAGCTGCGCGACGAGCTCGGAAAGAAGGAGCAGCAACTGCAGCAGG
CACACGCCATGCTTCTTAAGCACCACGAAAAGACACAGGAGCTGGAGTAC
CGCCAGCAGAAGAGCGTGCACCAGTTGCGCGAGGAGCAGATAAACAAGCA
ACACGATACCGAGTTGCATAATCAAAAAGACTACATGGACCGCATCAAGA
AGGAGCTGGTACGCAAGCATGCGGTTGAGCTGAGGCAACAGCCGAAGAGC
TTGAAGCAAAAGGAGCTCCAGATACGCAAGCAGTTCCGGGAAACATGCAA
GACGCAGACGAAGCAATACAAACGCTACAAGGCCCAAGTACTGCAGACGA
CACCAAAGGAGCAACAGAAGGAGGTCATTAAGCAGCTGAAGGAAGAGAAG
CATCGCAAGCTGACGCTGCTCGGTGAACAGTACGAGCAAAGCATTGCGGA
CATGTTCCAAAGTCAGAGCTACAAACTAGACGAAAGCCAAGTGATTGAGT
GCCAACGTACCCACGAGCAGCTGGAGTACGAGCTGGAGATGCTCACTGCC
TACCAGAACAAGAACAAGAAGCAGGCACAGGAGCAGCGCGATCGCGAGCG
TCGTGAGCTCGAGAATCGCGTCAGCGTGCGGCGTGGCCTGCTCGAGAATA
AGATGGACGCCGAGTTGCAGCAATTCAACCAGGAACGCGCCGAGCGCTTG
CGCATGAAACACGAGAAGCATACTAAAGAATTGGAAGCATTTGATAACGA
ATCAATTGCCCTAGGTTTCAGCACTTTATCTCTGATTGAGGTATCCCGAG
AAGCCTATGCAGATGAGGAGGGAAGTCTGTCTGGTTCAATGATTAGTTTA
GCCCATAGCAATAGTTCAACAAGTTTTCCGGCTGGTTCGCTAGCAAGCTT
TCTAGACCAT
BO07150.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:37:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tao-RG | 1479 | CG14217-PG | 1..1476 | 17..1492 | 7380 | 100 | Plus |
Tao-RA | 1479 | CG14217-PA | 1..1476 | 17..1492 | 7380 | 100 | Plus |
Tao-RI | 3117 | CG14217-PI | 1702..3114 | 80..1492 | 7065 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:37:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tao-RG | 2621 | CG14217-RG | 209..1684 | 17..1492 | 7380 | 100 | Plus |
Tao-RA | 2099 | CG14217-RA | 209..1684 | 17..1492 | 7380 | 100 | Plus |
Tao-RI | 4230 | CG14217-RI | 2403..3815 | 80..1492 | 7065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:36:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19572865..19573230 | 617..252 | 1830 | 100 | Minus |
X | 23542271 | X | 19571962..19572190 | 1256..1028 | 1130 | 99.6 | Minus |
X | 23542271 | X | 19572252..19572427 | 1030..855 | 880 | 100 | Minus |
X | 23542271 | X | 19573291..19573464 | 253..80 | 870 | 100 | Minus |
X | 23542271 | X | 19571584..19571707 | 1492..1369 | 620 | 100 | Minus |
X | 23542271 | X | 19572678..19572800 | 739..617 | 615 | 100 | Minus |
X | 23542271 | X | 19571775..19571895 | 1371..1251 | 605 | 100 | Minus |
X | 23542271 | X | 19572497..19572617 | 856..736 | 605 | 100 | Minus |
X | 23542271 | X | 19573603..19573666 | 80..17 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:37:00 has no hits.
BO07150.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:17:54 Download gff for
BO07150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-1-RA | 1..1479 | 17..1493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:20 Download gff for
BO07150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-1-RA | 173..1657 | 10..1498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:19:32 Download gff for
BO07150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-RA | 185..1653 | 24..1494 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:17:54 Download gff for
BO07150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-1-RA | 173..1657 | 10..1498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:26:26 Download gff for
BO07150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tao-RA | 216..1684 | 24..1494 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:26:26 Download gff for
BO07150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19573291..19573464 | 80..253 | 100 | <- | Minus |
X | 19573604..19573659 | 24..79 | 100 | | Minus |
X | 19571580..19571704 | 1372..1494 | 98 | <- | Minus |
X | 19571775..19571893 | 1253..1371 | 100 | <- | Minus |
X | 19571966..19572187 | 1031..1252 | 100 | <- | Minus |
X | 19572252..19572425 | 857..1030 | 100 | <- | Minus |
X | 19572497..19572613 | 740..856 | 100 | <- | Minus |
X | 19572678..19572800 | 617..739 | 100 | <- | Minus |
X | 19572866..19573228 | 254..616 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:19:32 Download gff for
BO07150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19466899..19467261 | 254..616 | 100 | <- | Minus |
arm_X | 19467324..19467497 | 80..253 | 100 | <- | Minus |
arm_X | 19465613..19465737 | 1372..1494 | 98 | <- | Minus |
arm_X | 19465808..19465926 | 1253..1371 | 100 | <- | Minus |
arm_X | 19465999..19466220 | 1031..1252 | 100 | <- | Minus |
arm_X | 19466285..19466458 | 857..1030 | 100 | <- | Minus |
arm_X | 19466530..19466646 | 740..856 | 100 | <- | Minus |
arm_X | 19466711..19466833 | 617..739 | 100 | <- | Minus |
arm_X | 19467637..19467692 | 24..79 | 100 | | Minus |
BO07150.pep Sequence
Translation from 16 to 1510
> BO07150.pep
MFWPRFAPVEVMVELEFGSGFEEMHEQMSGYKRMRREHQAHLVKLEEKCK
VDMEAHKTALDKEYDTLLHNFTRDLDRLETKHQQDVERRAKQTSAAEKKL
HKEITLKQENDRKVYDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQ
SQKDNLKQHEAQEEQRMLQAQKQYIELEMRKFKRKRMIMQHEHEDQQLRD
ELGKKEQQLQQAHAMLLKHHEKTQELEYRQQKSVHQLREEQINKQHDTEL
HNQKDYMDRIKKELVRKHAVELRQQPKSLKQKELQIRKQFRETCKTQTKQ
YKRYKAQVLQTTPKEQQKEVIKQLKEEKHRKLTLLGEQYEQSIADMFQSQ
SYKLDESQVIECQRTHEQLEYELEMLTAYQNKNKKQAQEQRDRERRELEN
RVSVRRGLLENKMDAELQQFNQERAERLRMKHEKHTKELEAFDNESIALG
FSTLSLIEVSREAYADEEGSLSGSMISLAHSNSSTSFPAGSLASFLDH
BO07150.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:44:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tao-PG | 492 | CG14217-PG | 1..492 | 1..492 | 2519 | 100 | Plus |
Tao-PA | 492 | CG14217-PA | 1..492 | 1..492 | 2519 | 100 | Plus |
Tao-PI | 1038 | CG14217-PI | 568..1038 | 22..492 | 2404 | 100 | Plus |
Tao-PF | 1039 | CG14217-PF | 569..1039 | 22..492 | 2404 | 100 | Plus |
Tao-PD | 1039 | CG14217-PD | 569..1039 | 22..492 | 2404 | 100 | Plus |