Clone Sequence Records
BO07152.3prime Sequence
879 bp (814 high quality bases) assembled on 2005-12-04
> BO07152.3prime
ATGGTCTAGAAAGCTTGCCATGCAGCGCAGTCGCACCAGCGGCACCACGT
TGCCGTCCTTATCGTCCACATCTACCTCAACCTCTAGCTGGTAAAGCCCA
TCCTCCGGTATCGTGCTGTCGGGCAGACGGGCCAGGATCTCGCTCTCCCC
GGTGCGCAGCTTAAACGAAGCAGCTGCTTTGCTTACGTCGTCACCCTTTC
CCTCCTCTGATTGGGGCAGTGATATCCGTATTTTGGCAGGCAGAACGCTC
CCCCTGCCCAGGACCAATTTGGCGTTGGATTCGTCATTACCGTGCCAAAT
GAAGAGGTCATCCTCAGCCACCACGCAATCCTCCTCCTTGTGAAGCTGCT
GTTCGAGGGGGTCAATCAGGCACACAGCTTGGCGCGCGCAGCCGATGGCC
ACAACCTCGTCCGCCGAATGGCTGTTGTGGAGCTTGGCATCCGGGAAGCG
GGCTCCCACTGCCGCCTGAAGCTTGGGGATTTGCATTGTGGCGCCTAGTA
GAACGATGTCATCTATTTTACTCAACCCGGGATGCTCCTTTTGCGCCTGC
TCCACACACTCGCCTAGCTGCTGGATGAGGTTATTGATCACTGGCTGTAT
GAGGCTCTCGAAGCGAGCACGCGACATCTGGGCATTGTAATCAACGCCGT
CCATCAGGGAGTCGATATAAAGTTGCGTGGAAGGCATCGTGGTCAGGATG
TGTTTGCAATTGGCGGCGGCAGTGCGTATTTTGGCCACTGAGCGGCGAGA
CTCATGCGGATCTAGCTTGTACTTGCGACGGAACTCCTCGCAAATAAACT
GCACCAAGGCCTCGGTGAAATGCCGGCCACCGATGGGGAAAGGTCCGAAA
GTGGCCAGCTGAACGAACAGGCCATTTTG
BO07152.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7182-PA | 1542 | CG7182-RA | 679..1539 | 879..19 | 4255 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:36:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7182-RB | 1962 | CG7182-RB | 992..1852 | 879..19 | 4275 | 99.8 | Minus |
| CG7182-RA | 1786 | CG7182-RA | 816..1676 | 879..19 | 4275 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:36:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8344531..8345391 | 19..879 | 4275 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:36:17 has no hits.
BO07152.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:47 Download gff for
BO07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-PA | 679..1542 | 16..879 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:50:20 Download gff for
BO07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-PA | 679..1542 | 16..879 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:31:34 Download gff for
BO07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 816..1683 | 13..879 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:19:35 Download gff for
BO07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 816..1683 | 13..879 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:19:35 Download gff for
BO07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8344524..8345391 | 13..879 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:31:34 Download gff for
BO07152.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8337624..8338491 | 13..879 | 99 | | Plus |
BO07152.5prime Sequence
894 bp (826 high quality bases) assembled on 2005-12-04
> BO07152.5prime
GAAGTTATCAGTCGACATGTGGCCGCGATTTGGCATTAAGATTGGCAACA
GCACGCTTTGCATCGCCCATGTGCGCGCGGATGGCAAGGCGGAGGTGATC
GCCAACAAACAGGGCGACCGAGTGTCCCAAGCGTGCCTTCTCTGGGACGG
AGCCTCGGAGATCGAATGTGGCCTCACGGCCAAGCAGAAGATGGCCAACC
GTCCGCGCCAGGCGGTGGCGCACAGCTTTCAGTTGCTTCAGCCCAAGGAA
GAGCTCACGGAGGAGAAACTGTCCAGTGCGCTGCGTGAAATACCCTGCGA
CTTTGACAAGGAGGAGCTGGTGTTCCGGATGGAGCACACTGTACCCTCCG
ACAGGGAGGACCAAGACGATAGAGTTGTGACCAAGGACCTCAGCGCCTAT
CAGGTGACGGTGGAGCTGCTGCGCGCTGAGCTGGAGCTGGCCCATCAATA
TCACACGGACGGGGAGCAGGCGCCCATTGCCGTGCTATCCATACCCAGCT
ACTATCCCGCCTCGGCCTACAAACTGCTAGCAGATGCCGCTCAAACCGCT
GGCTTCCATGTGGCCCAGATTATAACCGAACCCACGGCCGCCGTTCTAGG
CTATAGCATCGGCGAGGAGCAGACGGAACAGCGCCGCCATGTGCTGACAA
TCAAATGCGGTGGCTTATATAGCGACATCGCATTCTACTCCGTCCAAAAT
GGCCTGTTCGTTCAGCTGGCCACTTTCGGACCCTTCCCCATCGGTGGCCG
GCAATTCACCGAGGCCTTGGTGCAGTTTATTTGCGAGGAGTTCCGTCGCA
AGTACAAGCTAGATCCGCATGAGTCTCGCCGCTCAGTGGCCAAAATACGC
ACTGCCGCCGCCCATTGCAAACACATCCTGACCACGATGCCTTC
BO07152.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:56:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7182-PA | 1542 | CG7182-RA | 1..878 | 17..894 | 4365 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:03:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7182-RB | 1962 | CG7182-RB | 314..1191 | 17..894 | 4375 | 99.9 | Plus |
| CG7182-RA | 1786 | CG7182-RA | 138..1015 | 17..894 | 4375 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:03:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8345192..8346069 | 894..17 | 4375 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:03:10 has no hits.
BO07152.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:48 Download gff for
BO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-PA | 1..878 | 17..894 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:50:22 Download gff for
BO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-PA | 1..878 | 17..894 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:04:47 Download gff for
BO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 138..1015 | 17..894 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:12:10 Download gff for
BO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 138..1015 | 17..894 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:12:10 Download gff for
BO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8345192..8346069 | 17..894 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:04:47 Download gff for
BO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8338292..8339169 | 17..894 | 99 | | Minus |
BO07152.complete Sequence
1573 bp (1573 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630689
> BO07152.complete
GAAGTTATCAGTCGACATGTGGCCGCGATTTGGCATTAAGATTGGCAACA
GCACGCTTTGCATCGCCCATGTGCGCGCGGATGGCAAGGCGGAGGTGATC
GCCAACAAACAGGGCGACCGAGTGTCCCAAGCGTGCCTTCTCTGGGACGG
AGCCTCGGAGATCGAATGTGGCCTCACGGCCAAGCAGAAGATGGCCAACC
GTCCGCGCCAGGCGGTGGCGCACAGCTTTCAGTTGCTTCAGCCCAAGGAA
GAGCTCACGGAGGAGAAACTGTCCAGTGCGCTGCGTGAAATACCCTGCGA
CTTTGACAAGGAGGAGCTGGTGTTCCGGATGGAGCACACTGTACCCTCCG
ACAGGGAGGACCAAGACGATAGAGTTGTGACCAAGGACCTCAGCGCCTAT
CAGGTGACGGTGGAGCTGCTGCGCGCTGAGCTGGAGCTGGCCCATCAATA
TCACACGGACGGGGAGCAGGCGCCCATTGCCGTGCTATCCATACCCAGCT
ACTATCCCGCCTCGGCCTACAAACTGCTAGCAGATGCCGCTCAAACCGCT
GGCTTCCATGTGGCCCAGATTATAACCGAACCCACGGCCGCCGTTCTAGG
CTATAGCATCGGCGAGGAGCAGACGGAACAGCGCCGCCATGTGCTGACAA
TCAAATGCGGTGGCTTATATAGCGACATCGCATTCTACTCCGTCCAAAAT
GGCCTGTTCGTTCAGCTGGCCACTTTCGGACCCTTCCCCATCGGTGGCCG
GCAATTCACCGAGGCCTTGGTGCAGTTTATTTGCGAGGAGTTCCGTCGCA
AGTACAAGCTAGATCCGCATGAGTCTCGCCGCTCAGTGGCCAAAATACGC
ACTGCCGCCGCCAATTGCAAACACATCCTGACCACGATGCCTTCCACGCA
ACTTTATATCGACTCCCTGATGGACGGCGTTGATTACAATGCCCAGATGT
CGCGTGCTCGCTTCGAGAGCCTCATACAGCCAGTGATCAATAACCTCATC
CAGCAGCTAGGCGAGTGTGTGGAGCAGGCGCAAAAGGAGCATCCCGGGTT
GAGTAAAATAGATGACATCGTTCTACTAGGCGCCACAATGCAAATCCCCA
AGCTTCAGGCGGCAGTGGGAGCCCGCTTCCCGGATGCCAAGCTCCACAAC
AGCCATTCGGCGGACGAGGTTGTGGCCATCGGCTGCGCGCGCCAAGCTGT
GTGCCTGATTGACCCCCTCGAACAGCAGCTTCACAAGGAGGAGGATTGCG
TGGTGGCTGAGGATGACCTCTTCATTTGGCACGGTAATGACGAATCCAAC
GCCAAATTGGTCCTGGGCAGGGGGAGCGTTCTGCCTGCCAAAATACGGAT
ATCACTGCCCCAATCAGAGGAGGGAAAGGGTGACGACGTAAGCAAAGCAG
CTGCTTCGTTTAAGCTGCGCACCGGGGAGAGCGAGATCCTGGCCCGTCTG
CCCGACAGCACGATACCGGAGGATGGGCTTTACCAGCTAGAGGTTGAGGT
AGATGTGGACGATAAGGACGGCAACGTGGTGCCGCTGGTGCGACTGCGCT
GCATGGCAAGCTTTCTAGACCAT
BO07152.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:50:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7182-RB | 1542 | CG7182-PB | 1..1539 | 17..1555 | 7695 | 100 | Plus |
| CG7182-RA | 1542 | CG7182-PA | 1..1539 | 17..1555 | 7695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:50:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7182-RB | 1962 | CG7182-RB | 314..1852 | 17..1555 | 7695 | 100 | Plus |
| CG7182-RA | 1786 | CG7182-RA | 138..1676 | 17..1555 | 7695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:49:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8344531..8346069 | 1555..17 | 7695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:50:00 has no hits.
BO07152.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:17:55 Download gff for
BO07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 1..1542 | 17..1558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:23 Download gff for
BO07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 262..1807 | 17..1561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:13:41 Download gff for
BO07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 138..1676 | 17..1557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:17:55 Download gff for
BO07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 262..1807 | 17..1561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:27:14 Download gff for
BO07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 138..1676 | 17..1557 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:27:14 Download gff for
BO07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8344528..8346069 | 17..1557 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:13:41 Download gff for
BO07152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8337628..8339169 | 17..1557 | 99 | | Minus |
BO07152.pep Sequence
Translation from 16 to 1573
> BO07152.pep
MWPRFGIKIGNSTLCIAHVRADGKAEVIANKQGDRVSQACLLWDGASEIE
CGLTAKQKMANRPRQAVAHSFQLLQPKEELTEEKLSSALREIPCDFDKEE
LVFRMEHTVPSDREDQDDRVVTKDLSAYQVTVELLRAELELAHQYHTDGE
QAPIAVLSIPSYYPASAYKLLADAAQTAGFHVAQIITEPTAAVLGYSIGE
EQTEQRRHVLTIKCGGLYSDIAFYSVQNGLFVQLATFGPFPIGGRQFTEA
LVQFICEEFRRKYKLDPHESRRSVAKIRTAAANCKHILTTMPSTQLYIDS
LMDGVDYNAQMSRARFESLIQPVINNLIQQLGECVEQAQKEHPGLSKIDD
IVLLGATMQIPKLQAAVGARFPDAKLHNSHSADEVVAIGCARQAVCLIDP
LEQQLHKEEDCVVAEDDLFIWHGNDESNAKLVLGRGSVLPAKIRISLPQS
EEGKGDDVSKAAASFKLRTGESEILARLPDSTIPEDGLYQLEVEVDVDDK
DGNVVPLVRLRCMASFLDH
BO07152.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:44:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7182-PB | 513 | CG7182-PB | 1..513 | 1..513 | 2634 | 100 | Plus |
| CG7182-PA | 513 | CG7182-PA | 1..513 | 1..513 | 2634 | 100 | Plus |
| Hsp70Bbb-PA | 641 | CG5834-PA | 2..378 | 3..397 | 442 | 30.6 | Plus |
| Hsp70Bc-PA | 641 | CG6489-PA | 2..378 | 3..397 | 440 | 30.6 | Plus |
| Hsp70Bb-PA | 641 | CG31359-PA | 2..378 | 3..397 | 440 | 30.6 | Plus |
