Clone Sequence Records
BO07156.3prime Sequence
892 bp (850 high quality bases) assembled on 2005-12-04
> BO07156.3prime
ATGGTCTAGAAAGCTTGCGTACTTTGCGGATTTGTAATCGGGTTCATCGC
CACCAGCACCGCCGCCTCCACCGTCCTTTGGCAGTTTTCGCTTTTGAATG
ATTGTCTGAATCTTTTGCCACTCCCTATCGAGCTCGGCCTTCTCGTTCTT
CTCCGTCTTGTTCTTGCGCGTCTTGCGACCGTCCTGCATCTTGACCCCGT
ACTGGAAGGCTGCCTTGGGCAGCGCCTCCTTCGTGCTCATGTAGTCGGAG
TACTCCTCCTGCGTGTCAAAGTCCCAGCGTCCAATGGGCCCCTTTTTATT
GCCCAAATCCATCTTGGTGTAATCCACCTCATCGTCCGAGTCGTCGATGG
CGTCGTTCATCTCCTCCAGCCCGGGATAGCATTCTGCGTATCCCTCGGGT
TCAGCGAACCGTGCGGCCATGGCCTTCGATATCTTGGGTGGCGGGGGAAT
ACTGGATATTATCGGCTCCTCTGATGCCTCCGGCGGGCCGTCTCCAAAGT
AGGACGGGGCGGACTTGCCTTGCTCCTGGCGGTTTCGCTCAGGTCGCGTG
GCAGAAGGTTGGTAGTCCCCTATATCGTCGTAGATATTATCGCCCAAGGG
AGCTGATTTCCCTCCCATGTTCGATGAGGACGAGGTGGCGTGCCGACTGG
AGCCACCATTGCTAGACGACCCACGAAGATTTTCCACCTCCTTTTCGTAG
AACAGCGGTTTGTCCTTGTCGCGCTTTTTGTTCTTCTTGTTGCGACCACC
GGCACGTAGATAGCTCANGATTTGGGACAGCTTGTTGATCACAATGTCAT
TGGTGGTCAGCGTGGCAACATCCTCTTGTGACACCGGCACCTCGAACTTG
GAGCGCTTCAGTGTGGTTGGAATATCCGACTCCCCTAGCTCG
BO07156.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:57:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18005-PA | 1674 | CG18005-RA | 798..1671 | 892..19 | 4351 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 09:56:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beag-RA | 1882 | CG18005-RA | 887..1760 | 892..19 | 4359 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 09:56:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9063406..9064192 | 106..892 | 3924 | 99.9 | Plus |
| 3R | 32079331 | 3R | 9063254..9063346 | 19..111 | 450 | 98.9 | Plus |
Blast to na_te.dros performed 2015-02-12 09:56:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7549..7628 | 324..402 | 109 | 63 | Plus |
BO07156.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:55 Download gff for
BO07156.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18005-PA | 798..1674 | 18..892 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:50:31 Download gff for
BO07156.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18005-PA | 798..1674 | 18..892 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:43:50 Download gff for
BO07156.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 887..1760 | 19..892 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:55:05 Download gff for
BO07156.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 887..1760 | 19..892 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:55:05 Download gff for
BO07156.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9063254..9063340 | 19..105 | 100 | <- | Plus |
| 3R | 9063406..9064192 | 106..892 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:43:50 Download gff for
BO07156.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4888976..4889062 | 19..105 | 100 | <- | Plus |
| arm_3R | 4889128..4889914 | 106..892 | 99 | | Plus |
BO07156.5prime Sequence
875 bp (827 high quality bases) assembled on 2005-12-03
> BO07156.5prime
GAAGTTATCAGTCGACATGTCGGATGCCCACTTGGAAGCACCGCCTTCGG
TGCGACTAACCAACGATGACTTCCGCAAGCTGCTAGCGACGCCCCGAGCT
CCTCCTCCTGGCTCCGGGACGAGCAGCACCTCCGCTGGAGGATCTCTGGC
CACTGCTACCTTTGCCACGCCCTCCACCGCCCCCGGCACGACAGGATTGA
GTGGCGAAAAGAAGAAGGGTCAGAGCAGCAGCGAGCGGAATGATCTGCGT
CGCAAGAAAAAGAACTTCTATGCGGCGCTCAAGAAGCAGGAGGATGTGAA
GCTGCAAGAGCTGTCCGAGAAGTACAGGGACCGAGCACGAGAACGACGCG
ATGGTGCCAATCCAGATTACGTGAACGTGAGCACGCCGGGACACGGAAGC
AGCACCAATGCGTATCGAGCTGTAGCGCCAGATATGAAATCCGGAATCGA
TGCCCAGGAGCGAAGAAGACGTATCATTCAGGAGTCCAAGTTCTTGGGTG
GAGACATCCAGCATACGCATTTGGTGAAGGGTCTTGATTACGCCCTTCTG
CAAAAAGTGCGCTCCGAGCTGCACTCGAAGGAAGCGGAAGAGGAGGAGAT
TGCCGCCGCTGTGGCAAGGGAAAAGCTCGCCGAAGCAGCTGCCGCCGCTG
AGCAATTGGAAGCGGAACGCCGCGAGTCGGAGGATATTAATGCAATCAAT
GGTGCACTAGCGCGCAATATTTACAATCTAGTGCAGGCAAGGCGTTCGAA
AGAAGTTCCCCGCAATGAGCTATTTGCTCCAGGACGGATGGCCTATGTGA
TCGACCTGGATGACGAGCTAGGGGAGTCGGATATTCCAACCACACTGAAG
CGCTCCAAGTTCGAGGTGCCGGTGT
BO07156.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:57:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18005-PA | 1674 | CG18005-RA | 1..859 | 17..875 | 4295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:31:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beag-RA | 1882 | CG18005-RA | 85..948 | 12..875 | 4305 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:31:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9064131..9064994 | 875..12 | 4305 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 03:31:10 has no hits.
BO07156.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:10:56 Download gff for
BO07156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18005-PA | 1..859 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:50:32 Download gff for
BO07156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18005-PA | 1..859 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:54:55 Download gff for
BO07156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 76..948 | 1..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:28:24 Download gff for
BO07156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 76..948 | 1..875 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:28:24 Download gff for
BO07156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9064131..9065003 | 1..875 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:54:55 Download gff for
BO07156.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4889853..4890725 | 1..875 | 99 | | Minus |
BO07156.complete Sequence
1705 bp (1705 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ630692
> BO07156.complete
GAAGTTATCAGTCGACATGTCGGATGCCCACTTGGAAGCACCGCCTTCGG
TGCGACTAACCAACGATGACTTCCGCAAGCTGCTAGCGACGCCCCGAGCT
CCTCCTCCTGGCTCCGGGACGAGCAGCACCTCCGCTGGAGGATCTCTGGC
CACTGCTACCTTTGCCACGCCCTCCACCGCCCCCGGCACGACAGGATTGA
GTGGCGAAAAGAAGAAGGGTCAGAGCAGCAGCGAGCGGAATGATCTGCGT
CGCAAGAAAAAGAACTTCTATGCGGCGCTCAAGAAGCAGGAGGATGTGAA
GCTGCAAGAGCTGTCCGAGAAGTACAGGGACCGAGCACGAGAACGACGCG
ATGGTGCCAATCCAGATTACGTGAACGTGAGCACGCCGGGACACGGAAGC
AGCACCAATGCGTATCGAGCTGTAGCGCCAGATATGAAATCCGGAATCGA
TGCCCAGGAGCGAAGAAGACGTATCATTCAGGAGTCCAAGTTCTTGGGTG
GAGACATCCAGCATACGCATTTGGTGAAGGGTCTTGATTACGCCCTTCTG
CAAAAAGTGCGCTCCGAGCTGCACTCGAAGGAAGCGGAAGAGGAGGAGAT
TGCCGCCGCTGTGGCAAGGGAAAAGCTCGCCGAAGCAGCTGCCGCCGCTG
AGCAATTGGAAGCGGAACGCCGCGAGTCGGAGGATATTAATGCAATCAAT
GGTGCACTAGCGCGCAATATTTACAATCTAGTGCAGGCAAGGCGTTCGAA
AGAAGTTCCCCGCAATGAGCTATTTGCTCCAGGACGGATGGCCTATGTGA
TCGACCTGGATGACGAGCTAGGGGAGTCGGATATTCCAACCACACTGAAG
CGCTCCAAGTTCGAGGTGCCGGTGTCACAAGAGGATGTTGCCACGCTGAC
CACCAATGACATTGTGATCAACAAGCTGTCCCAAATCCTGAGCTATCTAC
GTGCCGGTGGTCGCAACAAGAAGAACAAAAAGCGCGACAAGGACAAACCG
CTGTTCTACGAAAAGGAGGTGGAAAATCTTCGTGGGTCGTCTAGCAATGG
TGGCTCCAGTCGGCACGCCACCTCGTCCTCATCGAACATGGGAGGGAAAT
CAGCTCCCTTGGGCGATAATATCTACGACGATATAGGGGACTACCAACCT
TCTGCCACGCGACCTGAGCGAAACCGCCAGGAGCAAGGCAAGTCCGCCCC
GTCCTACTTTGGAGACGGCCCGCCGGAGGCATCAGAGGAGCCGATAATAT
CCAGTATTCCCCCGCCACCCAAGATATCGAAGGCCATGGCCGCACGGTTC
GCTGAACCCGAGGGATACGCAGAATGCTATCCCGGGCTGGAGGAGATGAA
CGACGCCATCGACGACTCGGACGATGAGGTGGATTACACCAAGATGGATT
TGGGCAATAAAAAGGGGCCCATTGGACGCTGGGACTTTGACACGCAGGAG
GAGTACTCCGACTACATGAGCACGAAGGAGGCGCTGCCCAAGGCAGCCTT
CCAGTACGGGGTCAAGATGCAGGACGGTCGCAAGACGCGCAAGAACAAGA
CGGAGAAGAACGAGAAGGCCGAGCTCGATAGGGAGTGGCAAAAGATTCAG
ACAATCATTCAAAAGCGAAAACTGCCAAAGGACGGTGGAGGCGGCGGTGC
TGGTGGCGATGAACCCGATTACAAATCCGCAAAGTACGCAAGCTTTCTAG
ACCAT
BO07156.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:50:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beag-RA | 1674 | CG18005-PA | 1..1671 | 17..1687 | 8355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:50:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beag-RA | 1882 | CG18005-RA | 85..1760 | 12..1687 | 8365 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:50:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9063406..9064994 | 1600..12 | 7930 | 99.9 | Minus |
| 3R | 32079331 | 3R | 9063254..9063346 | 1687..1595 | 450 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:50:41 has no hits.
BO07156.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:03:23 Download gff for
BO07156.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18005-RA | 1..1674 | 17..1688 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:22:28 Download gff for
BO07156.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18005-RA | 95..1779 | 1..1687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:24:53 Download gff for
BO07156.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 90..1760 | 17..1689 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:03:23 Download gff for
BO07156.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18005-RA | 95..1779 | 1..1687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:57 Download gff for
BO07156.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 90..1760 | 17..1689 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:57 Download gff for
BO07156.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9063252..9063340 | 1601..1689 | 97 | <- | Minus |
| 3R | 9063406..9064989 | 17..1600 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:24:53 Download gff for
BO07156.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4888974..4889062 | 1601..1689 | 97 | <- | Minus |
| arm_3R | 4889128..4890711 | 17..1600 | 100 | | Minus |
BO07156.pep Sequence
Translation from 16 to 1705
> BO07156.pep
MSDAHLEAPPSVRLTNDDFRKLLATPRAPPPGSGTSSTSAGGSLATATFA
TPSTAPGTTGLSGEKKKGQSSSERNDLRRKKKNFYAALKKQEDVKLQELS
EKYRDRARERRDGANPDYVNVSTPGHGSSTNAYRAVAPDMKSGIDAQERR
RRIIQESKFLGGDIQHTHLVKGLDYALLQKVRSELHSKEAEEEEIAAAVA
REKLAEAAAAAEQLEAERRESEDINAINGALARNIYNLVQARRSKEVPRN
ELFAPGRMAYVIDLDDELGESDIPTTLKRSKFEVPVSQEDVATLTTNDIV
INKLSQILSYLRAGGRNKKNKKRDKDKPLFYEKEVENLRGSSSNGGSSRH
ATSSSSNMGGKSAPLGDNIYDDIGDYQPSATRPERNRQEQGKSAPSYFGD
GPPEASEEPIISSIPPPPKISKAMAARFAEPEGYAECYPGLEEMNDAIDD
SDDEVDYTKMDLGNKKGPIGRWDFDTQEEYSDYMSTKEALPKAAFQYGVK
MQDGRKTRKNKTEKNEKAELDREWQKIQTIIQKRKLPKDGGGGGAGGDEP
DYKSAKYASFLDH
BO07156.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:28:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beag-PA | 557 | CG18005-PA | 1..557 | 1..557 | 2864 | 100 | Plus |
