Clone BO07185 Report

Search the DGRC for BO07185

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:71
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptBx42-RA
Protein status:BO07185.pep: validated full length
Sequenced Size:1675

Clone Sequence Records

BO07185.3prime Sequence

936 bp (846 high quality bases) assembled on 2005-12-04

> BO07185.3prime
ATGGTCTAGAAAGCTTGCATCGCGCTTGCTGCGCTTGCGATCCGAATGGC
TGCTGCGCTCGTTGTTCTTCTCCTCGGCACGCTTGGGCGCCTTTTTGGCC
ATGTTCAAGAACTGATCGAGACCGAAGGGATCCTCCTCCTTCTCGAACTC
AACGGGTCCACTCCTCTGGCCAGCGGCCGCCTCCTTGGAGGCACCGGAGA
ACTGCTTGTCTGGCACGAAACGCTTGGTATTTACAATGGCATCCAGATCA
CCGCCGTAGTTATCGCTATCCGCCTGCTTGCTGGGTCGGTAGATGTGAGC
GCCCAGTGTATTGGAATCGCGCCACGGCTTGTCGTACACATTGTACGCTT
CGTCATCACCGTAACCGGAGTCCATGCCCTTGGTGGTGTTGAATAGACGC
TGATCGAAGAGCGTTTCACCGTTGCCGGCACTCTTGGCGGGCAGACCCAA
AGCGATTTGCTCAGAAATGTCACGCTCCCTCTCCTTCTGCAGTTTCGATC
GCTTTTCGGGAGCCGCCCGCTGCAGGTTTCTATCCCGCTGGCGCTCCCTT
TGCCGCTCTGCCCGCAAGTCGTTGCGTTCACGCACCTCGGATCCTGTAGC
TCCGGAACCAGATGGCTCGGCTGCCTCCGGATTGCGTAGTCCCGCTCGCT
CTTCGCGAGCCCGCTGCGCCATCATACGCAGCATATCCTCCTTCTTCTCC
TTCTCCTTTTGGGCCAGCTTCTTTTCCAGCTGGGAGCGTGCCTCCACCGC
CTCGCGCGCCTTGCGATCGGCTATGTACAGCGCCTCGGCCATCTTGGCGA
ACTTCTCGTTGATGTGCACCTGCTGCAGACCGCGTCCATCGGCTGCCAGA
CGCTTGTCCAGTGGAATGGTGTAACCTTTGGCGTTCTTTCAGTTCGATAT
GCAGGGCGGGATCTTCCACTCCTTTTGCTCCTTGAC

BO07185.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:57:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG8264-PA 1644 Bx42-RA 724..1641 936..19 4565 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:06:59
Subject Length Description Subject Range Query Range Score Percent Strand
Bx42-RB 2403 CG8264-RB 881..1798 936..19 4575 99.9 Minus
Bx42-RA 1955 CG8264-RA 881..1798 936..19 4575 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:06:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9104475..9105333 19..877 4295 100 Plus
X 23542271 X 9105395..9105457 874..936 300 98.4 Plus
Blast to na_te.dros performed on 2015-02-11 17:06:55 has no hits.

BO07185.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:11:47 Download gff for BO07185.3prime
Subject Subject Range Query Range Percent Splice Strand
Bx42-PA 724..1644 18..936 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:51:41 Download gff for BO07185.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8264-PA 724..1644 18..936 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:42:23 Download gff for BO07185.3prime
Subject Subject Range Query Range Percent Splice Strand
Bx42-RA 881..1798 19..936 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:12:23 Download gff for BO07185.3prime
Subject Subject Range Query Range Percent Splice Strand
Bx42-RA 881..1798 19..936 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:12:23 Download gff for BO07185.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9104475..9105331 19..875 100 <- Plus
X 9105397..9105457 876..936 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:42:23 Download gff for BO07185.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8998508..8999364 19..875 100 <- Plus
arm_X 8999430..8999490 876..936 98   Plus

BO07185.5prime Sequence

874 bp (747 high quality bases) assembled on 2005-12-03

> BO07185.5prime
GAAGTTATCAGTCGACATGTCGCTATCAAGCCTGCTGCCCACGCCGACGA
ACGCGATCTGGGATCGGGAGGACGAGCGTCGCCTGGTCGCCCGCGGAGCA
CCAAAGATCGGAGCCCTGGTCTCCGCCAAAATCGCTGCTCCGCCGTACGG
ACAGCGTAAGGATTGGGTACCACATACGGATGCGGACTTTGGCGATGGCG
GCGCCTTCCCGGAGATCCATGTGGCGCAATATCCACTAGGTCTGGGAGCA
CCAGGAAATGTTGGCAAGAAGTCGGATGCTCTGGCCGTTCGCCTGGACGA
CAAGGGAAAGGTTAAATACGATGCCATAGCACGCCAAGGACATGGCAAGG
ACAAGATTGTGTACTCGTCCATTTCGCAACTGCTGCCGGCGGAGGTGTTG
GCCGAAGATGCGGATGAACTACAGCGCCCGGACGAGGAAACGGTGATGGA
GACGACGGAGGAGACGCGCCTGGCGCTGGAGAAGCTGACCAACCAGAAGA
TCACCTCAGCGCTGCCCGTGCGCCATGCCCAGAAGGCGGGTCCCGCCCAG
TACATTCGGTACACGCCCTCGCAGCAGGGCGATACCTTCAATTCGGGCGC
CAAGCAGCGTGTCATCCGGATGGTGGAGGCGCAGCTCGATCCGATGGAGC
CGCCCAAGTTCCGCATTAACAAAAAGATTCCACGAGGTCCACCATCGCCG
CCGGCACCTGTCCTCCACTCACCATCGCGCAAGGTGACGGTCAAGGAGCA
AAAGGAGTGGAAGATCCCGCCCTGCATATCGAACTGGAAGAACGCCAAAG
GTTACACCATTCCACTGGACAAGCGTCTGGCAGCCGATGGACGCGGTCTG
CAGCAGGTGCACATCAACGAGAAG

BO07185.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG8264-PA 1644 Bx42-RA 1..858 17..874 4290 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
Bx42-RB 2403 CG8264-RB 158..1015 17..874 4290 100 Plus
Bx42-RA 1955 CG8264-RA 158..1015 17..874 4290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9105395..9105959 802..238 2825 100 Minus
X 23542271 X 9106223..9106447 241..17 1125 100 Minus
X 23542271 X 9105258..9105333 874..799 380 100 Minus
Blast to na_te.dros performed on 2015-02-04 20:19:15 has no hits.

BO07185.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:11:48 Download gff for BO07185.5prime
Subject Subject Range Query Range Percent Splice Strand
Bx42-PA 1..858 17..874 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:51:42 Download gff for BO07185.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8264-PA 1..858 17..874 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:24:25 Download gff for BO07185.5prime
Subject Subject Range Query Range Percent Splice Strand
Bx42-RA 154..1015 10..874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:48:20 Download gff for BO07185.5prime
Subject Subject Range Query Range Percent Splice Strand
Bx42-RA 154..1015 10..874 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:48:20 Download gff for BO07185.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9105258..9105331 801..874 100 <- Minus
X 9105397..9105957 240..800 100 <- Minus
X 9106225..9106451 10..239 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:24:25 Download gff for BO07185.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8999291..8999364 801..874 100 <- Minus
arm_X 8999430..8999990 240..800 100 <- Minus
arm_X 9000258..9000484 10..239 98   Minus

BO07185.complete Sequence

1675 bp (1675 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630698

> BO07185.complete
GAAGTTATCAGTCGACATGTCGCTATCAAGCCTGCTGCCCACGCCGACGA
ACGCGATCTGGGATCGGGAGGACGAGCGTCGCCTGGTCGCCCGCGGAGCA
CCAAAGATCGGAGCCCTGGTCTCCGCCAAAATCGCTGCTCCGCCGTACGG
ACAGCGTAAGGATTGGGTACCACATACGGATGCGGACTTTGGCGATGGCG
GCGCCTTCCCGGAGATCCATGTGGCGCAATATCCACTAGGTCTGGGAGCA
CCAGGAAATGTTGGCAAGAAGTCGGATGCTCTGGCCGTTCGCCTGGACGA
CAAGGGAAAGGTTAAATACGATGCCATAGCACGCCAAGGACATGGCAAGG
ACAAGATTGTGTACTCGTCCATTTCGCAACTGCTGCCGGCGGAGGTGTTG
GCCGAAGATGCGGATGAACTACAGCGCCCGGACGAGGAAACGGTGATGGA
GACGACGGAGGAGACGCGCCTGGCGCTGGAGAAGCTGACCAACCAGAAGA
TCACCTCAGCGCTGCCCGTGCGCCATGCCCAGAAGGCGGGTCCCGCCCAG
TACATTCGGTACACGCCCTCGCAGCAGGGCGATACCTTCAATTCGGGCGC
CAAGCAGCGTGTCATCCGGATGGTGGAGGCGCAGCTCGATCCGATGGAGC
CGCCCAAGTTCCGCATTAACAAAAAGATTCCACGAGGTCCACCATCGCCG
CCGGCACCTGTCCTCCACTCACCATCGCGCAAGGTGACGGTCAAGGAGCA
AAAGGAGTGGAAGATCCCGCCCTGCATATCGAACTGGAAGAACGCCAAAG
GTTACACCATTCCACTGGACAAGCGTCTGGCAGCCGATGGACGCGGTCTG
CAGCAGGTGCACATCAACGAGAAGTTCGCCAAGATGGCCGAGGCGCTGTA
CATAGCCGATCGCAAGGCGCGCGAGGCGGTGGAGGCACGCTCCCAGCTGG
AAAAGAAGCTGGCCCAAAAGGAGAAGGAGAAGAAGGAGGATATGCTGCGT
ATGATGGCGCAGCGGGCTCGCGAAGAGCGAGCGGGACTACGCAATCCGGA
GGCAGCCGAGCCATCTGGTTCCGGAGCTACAGGATCCGAGGTGCGTGAAC
GCAACGACTTGCGGGCAGAGCGGCAAAGGGAGCGCCAGCGGGATAGAAAC
CTGCAGCGGGCGGCTCCCGAAAAGCGATCGAAACTGCAGAAGGAGAGGGA
GCGTGACATTTCTGAGCAAATCGCTTTGGGTCTGCCCGCCAAGAGTGCCG
GCAACGGTGAAACGCTCTTCGATCAGCGTCTATTCAACACCACCAAGGGC
ATGGACTCCGGTTACGGTGATGACGAAGCGTACAATGTGTACGACAAGCC
GTGGCGCGATTCCAATACACTGGGCGCTCACATCTACCGACCCAGCAAGC
AGGCGGATAGCGATAACTACGGCGGTGATCTGGATGCCATTGTAAATACC
AAGCGTTTCGTGCCAGACAAGCAGTTCTCCGGTGCCTCCAAGGAGGCGGC
CGCTGGCCAGAGGAGTGGACCCGTTGAGTTCGAGAAGGAGGAGGATCCCT
TCGGTCTCGATCAGTTCTTGAACATGGCCAAAAAGGCGCCCAAGCGTGCC
GAGGAGAAGAACAACGAGCGCAGCAGCCATTCGGATCGCAAGCGCAGCAA
GCGCGATGCAAGCTTTCTAGACCAT

BO07185.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:36:14
Subject Length Description Subject Range Query Range Score Percent Strand
Bx42-RB 1644 CG8264-PB 1..1641 17..1657 8205 100 Plus
Bx42-RA 1644 CG8264-PA 1..1641 17..1657 8205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:36:16
Subject Length Description Subject Range Query Range Score Percent Strand
Bx42-RB 2403 CG8264-RB 158..1798 17..1657 8205 100 Plus
Bx42-RA 1955 CG8264-RA 158..1798 17..1657 8205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:36:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9104475..9105333 1657..799 4295 100 Minus
X 23542271 X 9105395..9105959 802..238 2825 100 Minus
X 23542271 X 9106223..9106447 241..17 1125 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:36:13 has no hits.

BO07185.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:17:48 Download gff for BO07185.complete
Subject Subject Range Query Range Percent Splice Strand
Bx42-RA 1..1644 17..1658 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:40:07 Download gff for BO07185.complete
Subject Subject Range Query Range Percent Splice Strand
Bx42-RA 152..1796 10..1657 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:27:51 Download gff for BO07185.complete
Subject Subject Range Query Range Percent Splice Strand
Bx42-RA 158..1798 17..1659 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:17:49 Download gff for BO07185.complete
Subject Subject Range Query Range Percent Splice Strand
Bx42-RA 152..1796 10..1657 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:34:43 Download gff for BO07185.complete
Subject Subject Range Query Range Percent Splice Strand
Bx42-RA 158..1798 17..1659 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:34:43 Download gff for BO07185.complete
Subject Subject Range Query Range Percent Splice Strand
X 9104473..9105331 801..1659 99 <- Minus
X 9105397..9105957 240..800 100 <- Minus
X 9106225..9106447 17..239 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:27:51 Download gff for BO07185.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9000258..9000480 17..239 100   Minus
arm_X 8998506..8999364 801..1659 99 <- Minus
arm_X 8999430..8999990 240..800 100 <- Minus

BO07185.pep Sequence

Translation from 16 to 1675

> BO07185.pep
MSLSSLLPTPTNAIWDREDERRLVARGAPKIGALVSAKIAAPPYGQRKDW
VPHTDADFGDGGAFPEIHVAQYPLGLGAPGNVGKKSDALAVRLDDKGKVK
YDAIARQGHGKDKIVYSSISQLLPAEVLAEDADELQRPDEETVMETTEET
RLALEKLTNQKITSALPVRHAQKAGPAQYIRYTPSQQGDTFNSGAKQRVI
RMVEAQLDPMEPPKFRINKKIPRGPPSPPAPVLHSPSRKVTVKEQKEWKI
PPCISNWKNAKGYTIPLDKRLAADGRGLQQVHINEKFAKMAEALYIADRK
AREAVEARSQLEKKLAQKEKEKKEDMLRMMAQRAREERAGLRNPEAAEPS
GSGATGSEVRERNDLRAERQRERQRDRNLQRAAPEKRSKLQKERERDISE
QIALGLPAKSAGNGETLFDQRLFNTTKGMDSGYGDDEAYNVYDKPWRDSN
TLGAHIYRPSKQADSDNYGGDLDAIVNTKRFVPDKQFSGASKEAAAGQRS
GPVEFEKEEDPFGLDQFLNMAKKAPKRAEEKNNERSSHSDRKRSKRDASF
LDH

BO07185.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:44:48
Subject Length Description Subject Range Query Range Score Percent Strand
Bx42-PB 547 CG8264-PB 1..547 1..547 2825 100 Plus
Bx42-PA 547 CG8264-PA 1..547 1..547 2825 100 Plus