Clone Sequence Records
BO07266.3prime Sequence
955 bp (847 high quality bases) assembled on 2005-12-04
> BO07266.3prime
ATGGTCTAGAAAGCTTGCCTTTAAGTAGCTAAGTGCCTCCTCCACGTCGG
ACTTGGATCCTAGGAATATGGGACTGCGCTCGTGGATCTTCTTGGGCACA
ATGTCCAAAATGCTGATCTTTCCGTCGCTGGCCAGACCTCCAGCCTGGAT
CATCAGATAGGCCATGGGCACGCACTCGTACAGCAGACGAAGTTTTCCGC
TGGGAGCGGACTTTGTTGCCGGATAGATAAAGATGCCGCCGTATTTAATG
GTGCGATGCACATCCGCGACCATGGAACCCACGTACCGCGCTCCATAGGG
CTTTCCCTTGGCGGGATCCTTCTTGGCCGCAATGTAGTTGAAGACACCAT
CCTCCCAATCCGCTGCATATCCCTCGTTGATAGAGTATATCTTTCCCTTC
TCCGGCACCCGCATGTTGGGATCGGTCAGCACGAACTCTCCGATGGCCGG
GTCATAAGTGAAGCCATTCACTCCCGAACCCAGACCCAGGACAATTGCTG
TGGCCGAACCGTATAGCGCGTAGCCGGCGGCCACCAGCTGATTTCCGGGC
TGCAGTGCATCCTCCACTGTGGGCGGACCATCGCTTTTCTTGCGGTAAAT
GGCGAAGATTGAACCGATCGACACCAGGCAGTCTATGTTGGAGGATCCAT
CCAAGGGATCGAAGCACACGATGTATTTGCCCTGTTTCTCCACTTCCACC
TCGATCACATTCTCGTTCTCCTCGGANACCATTAGACATGTGGTATAGGA
TGACTTCAGCATGTTGATGAACAGCTCGTTGGAGAGCACGTCCAGTTTCT
TGACCTCCTCGCCTTGGACATTCACGTCGCCAGCGAATCCATGGAGCTTG
GCGATACCTGCCTTCCGCACCGCGGATGATGTAGCCTTGATGGCGGTCTG
GATGGAGTTGAGCAGCTGGGAGAGATCGCCAGTGGCGCTCTTGAACTTTC
GCTGC
BO07266.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31692-PA | 1005 | fbp-RA | 66..1002 | 955..19 | 4666 | 99.8 | Minus |
CG31692-PB | 1032 | fbp-RB | 93..1029 | 955..19 | 4666 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:33:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-RE | 1202 | CG31692-RE | 210..1146 | 955..19 | 4674 | 99.9 | Minus |
fbp-RD | 1185 | CG31692-RD | 193..1129 | 955..19 | 4674 | 99.9 | Minus |
fbp-RC | 1113 | CG31692-RC | 121..1057 | 955..19 | 4674 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:33:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19761643..19762308 | 19..684 | 3330 | 100 | Plus |
2L | 23513712 | 2L | 19762487..19762761 | 681..955 | 1364 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:33:54 has no hits.
BO07266.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:13:51 Download gff for
BO07266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31692-PB | 93..1032 | 16..955 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:54:24 Download gff for
BO07266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31692-PB | 93..1032 | 16..955 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:47:15 Download gff for
BO07266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RC | 121..1057 | 19..955 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:52:06 Download gff for
BO07266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RC | 121..1057 | 19..955 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:52:06 Download gff for
BO07266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19761643..19762305 | 19..681 | 100 | <- | Plus |
2L | 19762488..19762761 | 682..955 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:47:15 Download gff for
BO07266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19761643..19762305 | 19..681 | 100 | <- | Plus |
arm_2L | 19762488..19762761 | 682..955 | 99 | | Plus |
BO07266.5prime Sequence
937 bp (793 high quality bases) assembled on 2005-12-04
> BO07266.5prime
GAAGTTATCAGTCGACATGACCCAACAGAGGCCAGCTTTCGACTCCAATG
CGATGACGCTGACGCGTTTCGTGCTGCAGGAGCAGCGAAAGTTCAAGAGC
GCCACTGGCGATCTCTCCCAGCTGCTCAACTCCATCCAGACCGCCATCAA
GGCTACATCATCCGCGGTGCGGAAGGCAGGTATCGCCAAGCTCCATGGAT
TCGCTGGCGACGTGAATGTCCAAGGCGAGGAGGTCAAGAAACTGGACGTG
CTCTCCAACGAGCTGTTCATCAACATGCTGAAGTCATCCTATACCACATG
TCTAATGGTTTCCGAGGAGAACGAGAATGTGATCGAGGTGGAAGTGGAGA
AACAGGGCAAATACATCGTGTGCTTCGATCCCTTGGATGGATCCTCCAAC
ATAGACTGCCTGGTGTCGATCGGTTCAATCTTCGCCATTTACCGCAAGAA
AAGCGATGGTCCGCCCACAGTGGAGGATGCACTGCAGCCCGGAAATCAGC
TGGTGGCCGCCGGCTACGCGCTATACGGTTCGGCCACAGCAATTGTCCTG
GGTCTGGGTTCGGGAGTGAATGGCTTCACTTATGACCCGGCCATCGGAGA
GTTCGTGCTGACCGATCCCAACATGCGGGTGCCGGAGAAGGGAAAGATAT
ACTCTATCAACGAGGGATATGCAGCGGATTGGGAGGATGGTGTCTTCAAC
TACATTGCGGCCAAGAAGGATCCCGCCAAGGGAAAGCCCTATGGAGCGCG
GTACGTGGGTTCCATGGTCGCGGATGTGCATCGCACCATTAAATACGGCG
GCATCTTTATCTATCCGGCAAACAAGTCCGCTCCCAGCGGAAAACTTCGT
CTGCTGTACGAGTGCGTGCCCATGGCCTATCTGATGATCCAGGCTGGAGG
TCTGGGCAGCGACGGAAAGATCAGCATTTTGGACATT
BO07266.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31692-PA | 1005 | fbp-RA | 1..921 | 17..937 | 4530 | 99.6 | Plus |
CG31692-PB | 1032 | fbp-RB | 28..948 | 17..937 | 4530 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:10:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-RE | 1202 | CG31692-RE | 145..1065 | 17..937 | 4560 | 99.7 | Plus |
fbp-RA | 1130 | CG31692-RA | 73..993 | 17..937 | 4560 | 99.7 | Plus |
fbp-RD | 1185 | CG31692-RD | 140..1048 | 29..937 | 4500 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:10:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19761724..19762308 | 937..353 | 2880 | 99.5 | Minus |
2L | 23513712 | 2L | 19762487..19762826 | 356..17 | 1700 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 05:10:40 has no hits.
BO07266.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:13:52 Download gff for
BO07266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31692-PB | 28..948 | 17..937 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:54:26 Download gff for
BO07266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31692-PB | 28..948 | 17..937 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:37 Download gff for
BO07266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RA | 73..993 | 17..937 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:36:38 Download gff for
BO07266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RA | 73..993 | 17..937 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:36:38 Download gff for
BO07266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19761724..19762305 | 356..937 | 99 | <- | Minus |
2L | 19762488..19762835 | 7..355 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:37 Download gff for
BO07266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19762488..19762835 | 7..355 | 98 | | Minus |
arm_2L | 19761724..19762305 | 356..937 | 99 | <- | Minus |
BO07266.complete Sequence
1036 bp (1036 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630727
> BO07266.complete
GAAGTTATCAGTCGACATGACCCAACAGAGGCCAGCTTTCGACTCCAATG
CGATGACGCTGACGCGTTTCGTGCTGCAGGAGCAGCGAAAGTTCAAGAGC
GCCACTGGCGATCTCTCCCAGCTGCTCAACTCCATCCAGACCGCCATCAA
GGCTACATCATCCGCGGTGCGGAAGGCAGGTATCGCCAAGCTCCATGGAT
TCGCTGGCGACGTGAATGTCCAAGGCGAGGAGGTCAAGAAACTGGACGTG
CTCTCCAACGAGCTGTTCATCAACATGCTGAAGTCATCCTATACCACATG
TCTAATGGTTTCCGAGGAGAACGAGAATGTGATCGAGGTGGAAGTGGAGA
AACAGGGCAAATACATCGTGTGCTTCGATCCCTTGGATGGATCCTCCAAC
ATAGACTGCCTGGTGTCGATCGGTTCAATCTTCGCCATTTACCGCAAGAA
AAGCGATGGTCCGCCCACAGTGGAGGATGCACTGCAGCCCGGAAATCAGC
TGGTGGCCGCCGGCTACGCGCTATACGGTTCGGCCACAGCAATTGTCCTG
GGTCTGGGTTCGGGAGTGAATGGCTTCACTTATGACCCGGCCATCGGAGA
GTTCGTGCTGACCGATCCCAACATGCGGGTGCCGGAGAAGGGAAAGATAT
ACTCTATCAACGAGGGATATGCAGCGGATTGGGAGGATGGTGTCTTCAAC
TACATTGCGGCCAAGAAGGATCCCGCCAAGGGAAAGCCCTATGGAGCGCG
GTACGTGGGTTCCATGGTCGCGGATGTGCATCGCACCATTAAATACGGCG
GCATCTTTATCTATCCGGCAACAAAGTCCGCTCCCAGCGGAAAACTTCGT
CTGCTGTACGAGTGCGTGCCCATGGCCTATCTGATGATCCAGGCTGGAGG
TCTGGCCAGCGACGGAAAGATCAGCATTTTGGACATTGTGCCCAAGAAGA
TCCACGAGCGCAGTCCCATATTCCTAGGATCCAAGTCCGACGTGGAGGAG
GCACTTAGCTACTTAAAGGCAAGCTTTCTAGACCAT
BO07266.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:26:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-RE | 1005 | CG31692-PE | 1..1002 | 17..1018 | 5010 | 100 | Plus |
fbp-RA | 1005 | CG31692-PA | 1..1002 | 17..1018 | 5010 | 100 | Plus |
fbp-RD | 969 | CG31692-PD | 1..966 | 53..1018 | 4830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:26:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-RE | 1202 | CG31692-RE | 145..1146 | 17..1018 | 5010 | 100 | Plus |
fbp-RA | 1130 | CG31692-RA | 73..1074 | 17..1018 | 5010 | 100 | Plus |
fbp-RD | 1185 | CG31692-RD | 140..1129 | 29..1018 | 4950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:26:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19761643..19762308 | 1018..353 | 3330 | 100 | Minus |
2L | 23513712 | 2L | 19762487..19762826 | 356..17 | 1700 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:26:24 has no hits.
BO07266.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:57 Download gff for
BO07266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RB | 28..1032 | 17..1021 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:06 Download gff for
BO07266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RB | 143..1144 | 17..1018 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:24:36 Download gff for
BO07266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RA | 73..1074 | 17..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:57 Download gff for
BO07266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RB | 143..1144 | 17..1018 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:31:52 Download gff for
BO07266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RA | 73..1074 | 17..1020 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:31:52 Download gff for
BO07266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19761640..19762305 | 356..1020 | 99 | <- | Minus |
2L | 19762488..19762826 | 17..355 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:24:36 Download gff for
BO07266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19761640..19762305 | 356..1020 | 99 | <- | Minus |
arm_2L | 19762488..19762826 | 17..355 | 100 | | Minus |
BO07266.pep Sequence
Translation from 16 to 1036
> BO07266.pep
MTQQRPAFDSNAMTLTRFVLQEQRKFKSATGDLSQLLNSIQTAIKATSSA
VRKAGIAKLHGFAGDVNVQGEEVKKLDVLSNELFINMLKSSYTTCLMVSE
ENENVIEVEVEKQGKYIVCFDPLDGSSNIDCLVSIGSIFAIYRKKSDGPP
TVEDALQPGNQLVAAGYALYGSATAIVLGLGSGVNGFTYDPAIGEFVLTD
PNMRVPEKGKIYSINEGYAADWEDGVFNYIAAKKDPAKGKPYGARYVGSM
VADVHRTIKYGGIFIYPATKSAPSGKLRLLYECVPMAYLMIQAGGLASDG
KISILDIVPKKIHERSPIFLGSKSDVEEALSYLKASFLDH
BO07266.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-PE | 334 | CG31692-PE | 1..334 | 1..334 | 1702 | 100 | Plus |
fbp-PA | 334 | CG31692-PA | 1..334 | 1..334 | 1702 | 100 | Plus |
fbp-PD | 322 | CG31692-PD | 1..322 | 13..334 | 1640 | 100 | Plus |
fbp-PC | 322 | CG31692-PC | 1..322 | 13..334 | 1640 | 100 | Plus |