Clone BO07267 Report

Search the DGRC for BO07267

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:72
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG4847-RA
Protein status:BO07267.pep: Imported from assembly
Sequenced Size:1204

Clone Sequence Records

BO07267.3prime Sequence

903 bp (771 high quality bases) assembled on 2005-12-04

> BO07267.3prime
ATGGTCTAGAAAGCTTGCAACCACGGGATAGGAGCACTCCTCAGCAATGA
AGCAGTAGTTTTTGCCGCGAGGCAGGCGGAAGTAGCCCTTTTCGCCCCAG
GTGTCGTCCCAGGAGTTCTTGACGATCCAGTAATCCTGTCCTTTCTCCGA
TCCGTAACCGACGACCAGAATGGAGTGGTTCGGCTCGCCCTTGTTGCACT
CATCGTCGTTATAGATGCCACCGGCGTAGTTCTTAAGAGTCTCCAAACCA
TTCACCGAACAGGCAACTGGTCCCAGAGTGGCCACCACCTTCTTCAGCTG
CTCCTCGTCCTTGGGCGGAATAGCGGCGAATCCCTGGAGGGTGGCTCCGG
ACTTGCTGCCATCGTACTTGCACGTGCCCTTGTTGTCAATGTAGGGATAG
GCCCCCTCCTGGGACACACCCTTTTGCACCTCATCGATGAAACAGAATGC
GGCCTCCTGGAAGCCACCATCGCAGCCATTCAGGCCAAAGTCCTCCACCG
GACCACAGTCGACCAGATTCTGCTCAGAGAGATTGGGCAGGCTGCCGGTC
TTGCGGAAGGTGTGTCCCTCAATGGCACCAGTGGTGGCAAAGGCCCAACA
GGAGCCACAGGTACCCTGGAATTTGACTGGTGTGACACCGCCATGCTCGC
GCCAATCGAAGGCATCCGGGATGGGCTTCGCAGGCAGGTTGACCAACTTC
AAACTGGCAGCAGCTCGAGCCTTAGCCTCCGGACTTCTCTTCAGACCGGT
CAATTGACTAAGGAACTCAGAGTGGGTCAGATCGGCGAAGGCGTTCACGG
CCTGCTTGAAGGTGTGCACTCCTTGGGGCAAGGCTGCGTTTCCGGCTTCC
ACAGGTTCTTGGTGGAAGCGAGGCACCTCATGAAGAGCGCGATCAGCGGC
GGA

BO07267.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG4847-PA 1173 CG4847-RA 337..1170 852..19 4120 99.7 Minus
CG4847-PC 1173 CG4847-RC 337..1170 852..19 4120 99.7 Minus
CG4847-PD 1263 CG4847-RD 427..1260 852..19 4120 99.7 Minus
CG4847-PB 1173 CG4847-RB 337..1170 852..19 4120 99.7 Minus
CG4847-PE 1173 CG4847-RE 337..1170 852..19 4120 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG4847-RE 1308 CG4847-RE 318..1205 903..19 4335 99.4 Minus
CG4847-RD 1501 CG4847-RD 511..1398 903..19 4335 99.4 Minus
CG4847-RC 1313 CG4847-RC 323..1210 903..19 4335 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17513050..17513752 721..19 3515 100 Minus
2R 25286936 2R 17512800..17512985 903..721 750 97.3 Minus
Blast to na_te.dros performed on 2015-02-12 00:05:30 has no hits.

BO07267.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:13:53 Download gff for BO07267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4847-PA 284..1173 15..902 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:54:27 Download gff for BO07267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4847-PE 284..1173 15..902 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:44:56 Download gff for BO07267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4847-RC 324..1215 13..902 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:09:51 Download gff for BO07267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4847-RC 324..1215 13..902 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:09:51 Download gff for BO07267.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 17512801..17512984 722..902 97 -> Minus
2R 17513050..17513757 13..721 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:44:56 Download gff for BO07267.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13400306..13400489 722..902 97 -> Minus
arm_2R 13400555..13401262 13..721 99   Minus

BO07267.5prime Sequence

821 bp (746 high quality bases) assembled on 2005-12-04

> BO07267.5prime
GAAGTTATCAGTCGATATGAAGCTTCTGTTGGTTCTTCCACTTCTGGTGG
CTGTGGTCTCTGGCCAGGGATTCGGAGGCGGTGGATTTGGAGGCGGATTT
GGAGGTGGACTCGGAGGCGGATTTGGAGGTGGACTCGGAGGCTTGGGCAA
CAATCGAGTGGGTGGAGCTTTACAAAATGTGGCCGGCGCCGTTCAGAATG
CCGTGGGCAACATTGCCAAGGCTGTGCCCAAGGTGCCGCTGCTCTCAAAC
GTCCAGGACTTTGGTGACTTCTTGAGCCAATCTGGAAAGACCTATCTCTC
CGCCGCTGATCGCGCTCTTCATGAAGGTGCCTTCGCTTCCACCAAGAACC
TGGTGGAAGCCGGAAACGCAGCCTTTGCCCAAGGAGTGCACACCTTCAAG
CAGGCCGTGAACGCCTTCGCCGATCTGACCCACTCTGAGTTCCTTAGTCA
ATTGACCGGTCTGAAGAGAAGTCCGGAGGCTAAGGCTCGAGCTGCTGCCA
GTTTGAAGTTGGTCAACCTGCCTGCGAAGCCCATCCCGGATGCCTTCGAT
TGGCGCGAGCATGGCGGTGTCACACCAGTCAAATTCCAGGGTACCTGTGG
CTCCTGTTGGGCCTTTGCCACCACTGGTGCCATTGAGGGACACACCTTCC
GCAAGACCGGCAGCCTGCCCAATCTCTCTGAGCAGAATCTGGTCGACTGT
GGTCCGGTGGAGGACTTTGGCCTGAATGGCTGCGATGGTGGCTTCCAGGA
GGCCGCATTCTGTTTCATCGATGAGGTGCAAAAGGGTGTGTCCCAGGAGG
GGGCCTATCCCTACATTGACA

BO07267.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG4847-PD 1263 CG4847-RD 90..895 16..821 4030 100 Plus
CG4847-PA 1173 CG4847-RA 1..805 17..821 4025 100 Plus
CG4847-PC 1173 CG4847-RC 1..805 17..821 4025 100 Plus
CG4847-PB 1173 CG4847-RB 1..805 17..821 4025 100 Plus
CG4847-PE 1173 CG4847-RE 1..805 17..821 4025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:34:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG4847-RE 1308 CG4847-RE 35..840 16..821 4030 100 Plus
CG4847-RD 1501 CG4847-RD 228..1033 16..821 4030 100 Plus
CG4847-RC 1313 CG4847-RC 40..845 16..821 4030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:34:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17513050..17513387 484..821 1690 100 Plus
2R 25286936 2R 17512457..17512715 16..274 1295 100 Plus
2R 25286936 2R 17512775..17512985 274..484 1055 100 Plus
Blast to na_te.dros performed on 2015-02-11 03:34:36 has no hits.

BO07267.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:13:54 Download gff for BO07267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4847-PD 82..894 9..820 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:54:30 Download gff for BO07267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4847-PD 82..894 9..820 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:55:16 Download gff for BO07267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4847-RC 35..844 7..820 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:45:02 Download gff for BO07267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4847-RC 35..844 7..820 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:45:02 Download gff for BO07267.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17512449..17512715 9..274 98 -> Plus
2R 17512776..17512984 275..483 100 -> Plus
2R 17513050..17513386 484..820 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:55:16 Download gff for BO07267.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13399954..13400220 9..274 98 -> Plus
arm_2R 13400281..13400489 275..483 100 -> Plus
arm_2R 13400555..13400891 484..820 100   Plus

BO07267.complete Sequence

1204 bp assembled on 2011-06-28

GenBank Submission: KX798354

> BO07267.complete
GAAGTTATCAGTCGATATGAAGCTTCTGTTGGTTCTTCCACTTCTGGTGG
CTGTGGTCTCTGGCCAGGGATTCGGAGGCGGTGGATTTGGAGGCGGATTT
GGAGGTGGACTCGGAGGCGGATTTGGAGGTGGACTCGGAGGCTTGGGCAA
CAATCGAGTGGGTGGAGCTTTACAAAATGTGGCCGGCGCCGTTCAGAATG
CCGTGGGCAACATTGCCAAGGCTGTGCCCAAGGTGCCGCTGCTCTCAAAC
GTCCAGGACTTTGGTGACTTCTTGAGCCAATCTGGAAAGACCTATCTCTC
CGCCGCTGATCGCGCTCTTCATGAAGGTGCCTTCGCTTCCACCAAGAACC
TGGTGGAAGCCGGAAACGCAGCCTTTGCCCAAGGAGTGCACACCTTCAAG
CAGGCCGTGAACGCCTTCGCCGATCTGACCCACTCTGAGTTCCTTAGTCA
ATTGACCGGTCTGAAGAGAAGTCCGGAGGCTAAGGCTCGAGCTGCTGCCA
GTTTGAAGTTGGTCAACCTGCCTGCGAAGCCCATCCCGGATGCCTTCGAT
TGGCGCGAGCATGGCGGTGTCACACCAGTCAAATTCCAGGGTACCTGTGG
CTCCTGTTGGGCCTTTGCCACCACTGGTGCCATTGAGGGACACACCTTCC
GCAAGACCGGCAGCCTGCCCAATCTCTCTGAGCAGAATCTGGTCGACTGT
GGTCCGGTGGAGGACTTTGGCCTGAATGGCTGCGATGGTGGCTTCCAGGA
GGCCGCATTCTGTTTCATCGATGAGGTGCAAAAGGGTGTGTCCCAGGAGG
GGGCCTATCCCTACATTGACAACAAGGGCACGTGCAAGTACGATGGCAGC
AAGTCCGGAGCCACCCTCCAGGGATTCGCCGCTATTCCGCCCAAGGACGA
GGAGCAGCTGAAGAAGGTGGTGGCCACTCTGGGACCAGTTGCCTGTTCGG
TGAATGGTTTGGAGACTCTTAAGAACTACGCCGGTGGCATCTATAACGAC
GATGAGTGCAACAAGGGCGAGCCGAACCACTCCATTCTGGTCGTCGGTTA
CGGATCGGAGAAAGGACAGGATTACTGGATCGTCAAGAACTCCTGGGACG
ACACCTGGGGCGAAAAGGGCTACTTCCGCCTGCCTCGCGGCAAAAACTAC
TGCTTCATTGCTGAGGAGTGCTCCTATCCCGTGGTTGCAAGCTTTCTAGA
CCAT

BO07267.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG4847-RD 1263 CG4847-PD 90..1260 16..1186 5855 100 Plus
CG4847-RE 1173 CG4847-PE 1..1170 17..1186 5850 100 Plus
CG4847-RC 1173 CG4847-PC 1..1170 17..1186 5850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG4847-RE 1308 CG4847-RE 35..1205 16..1186 5855 100 Plus
CG4847-RD 1501 CG4847-RD 228..1398 16..1186 5855 100 Plus
CG4847-RC 1313 CG4847-RC 40..1210 16..1186 5855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17513050..17513752 484..1186 3515 100 Plus
2R 25286936 2R 17512457..17512715 16..274 1295 100 Plus
2R 25286936 2R 17512775..17512985 274..484 1055 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:13:31 has no hits.

BO07267.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:16:21 Download gff for BO07267.complete
Subject Subject Range Query Range Percent Splice Strand
CG4847-RD 224..1393 17..1188 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:55:24 Download gff for BO07267.complete
Subject Subject Range Query Range Percent Splice Strand
CG4847-RC 41..1210 17..1188 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:14:01 Download gff for BO07267.complete
Subject Subject Range Query Range Percent Splice Strand
CG4847-RC 41..1210 17..1188 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:14:01 Download gff for BO07267.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17512458..17512715 17..274 100 -> Plus
2R 17512776..17512984 275..483 100 -> Plus
2R 17513050..17513752 484..1188 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:55:24 Download gff for BO07267.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13399963..13400220 17..274 100 -> Plus
arm_2R 13400281..13400489 275..483 100 -> Plus
arm_2R 13400555..13401257 484..1188 99   Plus

BO07267.pep Sequence

Translation from 16 to 1204

> BO07267.pep
MKLLLVLPLLVAVVSGQGFGGGGFGGGFGGGLGGGFGGGLGGLGNNRVGG
ALQNVAGAVQNAVGNIAKAVPKVPLLSNVQDFGDFLSQSGKTYLSAADRA
LHEGAFASTKNLVEAGNAAFAQGVHTFKQAVNAFADLTHSEFLSQLTGLK
RSPEAKARAAASLKLVNLPAKPIPDAFDWREHGGVTPVKFQGTCGSCWAF
ATTGAIEGHTFRKTGSLPNLSEQNLVDCGPVEDFGLNGCDGGFQEAAFCF
IDEVQKGVSQEGAYPYIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLKK
VVATLGPVACSVNGLETLKNYAGGIYNDDECNKGEPNHSILVVGYGSEKG
QDYWIVKNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVVASFLDH

BO07267.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:50:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG4847-PE 390 CG4847-PE 1..390 1..390 2081 100 Plus
CG4847-PC 390 CG4847-PC 1..390 1..390 2081 100 Plus
CG4847-PA 390 CG4847-PA 1..390 1..390 2081 100 Plus
CG4847-PD 420 CG4847-PD 31..420 1..390 2081 100 Plus
CG6347-PA 352 CG6347-PA 30..352 74..390 733 46.2 Plus