Clone Sequence Records
BO07274.3prime Sequence
901 bp (808 high quality bases) assembled on 2005-12-04
> BO07274.3prime
ATGGTCTAGAAAGCTTGCTACTGGGTAGTGGTCCTGACCGGATATACAGG
AATTACGAACGCCATAGATGGCGTCATTAGCTTCGGGCAACTTGCAGACT
TTGCCAGAGGCAGGACGAGCAAGACGTTGGGAGAGGACACTCAGATCAAG
GTTGTTTACTCGCACCATTAGGGTAGGTTCCTTCTCCACAGATCTACAGA
CCACGATCTTCTGACAATTTACCGGTGATCCGGTTAACTTGGGAGGCAGG
TGCCTGACCGGAGCGTCCGGGAATAGTCCCATGGTTTGAGGACCGACGTC
GACACCCACTTTGGGACTATTACAGGATAGACAAGATAGCCCCGTATTGA
TAAATCCAGCGGCCCTGGGACATGCATCCTTATCCTCAATCAATCTCAGC
CGGCGATCTATATCATCGAAGCGATCGCGTATATACTTCTTAAGAGCAGG
CATATGCACCTTATCCAGCTTGCTGTCGAGCATATCCTGCAGTTCCTCCA
TGGTTCCCAGAAAAGTAAGGTTGTATTCCTGAACAAGAGTCCTCAGACCT
TCGATCTCCACCACACATTGCTTGACTATTTCCAAACGATTAAATAAAGC
TTCGGTTTGCTTAAGAAAAGCCTCAAGTGTGAGGTAGAACTTCTCCAGCT
TGTGGCTGACCTCTTCCATTCGGTCCAGAATGGGTGTGGCTATACGTCGC
ATTAGCTTTTTCATGAAGTCCATGTTGGCCAGCAGACTGCATGCGATCTT
GTTGTCCTCATCGCAAACGGTGCACAGATCCTCGCAAGGAGAGGCGTACT
GTTCGGCCTGGTTGATCTTGTACTTCTTGTCCTTGGCCTTGTTGCAAATG
CGAATCTGCTGAAAGTGACACTCCAACTTGCACTCCAGCTGCTTGATGCG
T
BO07274.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10589-PA | 1161 | CG10589-RA | 276..1158 | 901..19 | 4415 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:31:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10589-RA | 1365 | CG10589-RA | 401..1283 | 901..19 | 4415 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:31:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20928226..20929108 | 901..19 | 4415 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 19:31:22 has no hits.
BO07274.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:07 Download gff for
BO07274.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-PA | 276..1161 | 15..901 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:54:46 Download gff for
BO07274.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-PA | 276..1161 | 15..901 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:08:36 Download gff for
BO07274.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 401..1293 | 6..901 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:19:55 Download gff for
BO07274.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 401..1293 | 6..901 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:19:55 Download gff for
BO07274.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20928226..20929118 | 6..901 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:08:36 Download gff for
BO07274.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20921326..20922218 | 6..901 | 99 | | Minus |
BO07274.5prime Sequence
873 bp (805 high quality bases) assembled on 2005-12-04
> BO07274.5prime
GAAGTTATCAGTCGACATGCCAGCTCATTTGGATTTAACCCTAGAGGAAA
TGACCAGGATTGCTTTGGGTGTGCCCGAGTTAACCCACGTAAATGTGGCT
GTACTCCAAAGTCTTTTGAATGTCCTTCTCAAGAAACTGAACTGTCAGAA
TGATATGGTAAGGATAAGTGGCTTCGAGGGCAAGTGTATGGAGCGCATTC
TCGAGCAATCCAAAATATCTCCACTGCCCTTCGACGTGGAGGCTATTGTT
CCAATTTCCGAGCAATTGGATAAAGTTCAAGAGTTGGACAAACGCATCAA
GCAGCTGGAGTGCAAGTTGGAGTGTCACTTTCAGCAGATTCGCATTTGCA
ACAAGGCCAAGGACAAGAAGTACAAGATCAACCAGGCCGAACAGTACGCC
TCTCCTTGCGAGGATCTGTGCACCGTTTGCGATGAGGACAACAAGATCGC
ATGCAGTCTGCTGGCCAACATGGACTTCATGAAAAAGCTAATGCGACGTA
TAGCCACACCCATTCTGGACCGAATGGAAGAGGTCAGCCACAAGCTGGAG
AAGTTCTACCTCACACTTGAGGCTTTTCTTAAGCAAACCGAAGCTTTATT
TAATCGTTTGGAAATAGTCAAGCAATGTGTGGTGGAGATCGAAGGTCTGA
GGACTCTTGTTCAGGAATACAACCTTACTTTTCTGGGAACCATGGAGGAA
CTGCAGGATATGCTCGACAGCAAGCTGGATAAGGTGCATATGCCTGCTCT
TAAGAAGTATATACGCGATCGCTTCGATGATATAGATCGCCGGCTGAGAT
TGATTGAGGATAAGGATGCATGTCCCANGGCCGCTGGATTTATCAATACG
GGGCTATCTTGTCTATCCTGTAA
BO07274.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10589-PA | 1161 | CG10589-RA | 1..857 | 17..873 | 4266 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:11:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10589-RA | 1365 | CG10589-RA | 126..982 | 17..873 | 4274 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:11:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20927951..20928807 | 17..873 | 4274 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:11:37 has no hits.
BO07274.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:08 Download gff for
BO07274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-PA | 1..855 | 17..871 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:54:48 Download gff for
BO07274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-PA | 1..855 | 17..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:42:42 Download gff for
BO07274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 126..982 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:04:57 Download gff for
BO07274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 126..982 | 17..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:04:57 Download gff for
BO07274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20927951..20928807 | 17..873 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:42:42 Download gff for
BO07274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20921051..20921907 | 17..873 | 99 | | Plus |
BO07274.complete Sequence
1192 bp (1192 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630729
> BO07274.complete
GAAGTTATCAGTCGACATGCCAGCTCATTTGGATTTAACCCTAGAGGAAA
TGACCAGGATTGCTTTGGGTGTGCCCGAGTTAACCCACGTAAATGTGGCT
GTACTCCAAAGTCTTTTGAATGTCCTTCTCAAGAAACTGAACTGTCAGAA
TGATATGGTAAGGATAAGTGGCTTCGAGGGCAAGTGTATGGAGCGCATTC
TCGAGCAATCCAAAATATCTCCACTGCCCTTCGACGTGGAGGCTATTGTT
CCAATTTCCGAGCAATTGGATAAAGTTCAAGAGTTGGACAAACGCATCAA
GCAGCTGGAGTGCAAGTTGGAGTGTCACTTTCAGCAGATTCGCATTTGCA
ACAAGGCCAAGGACAAGAAGTACAAGATCAACCAGGCCGAACAGTACGCC
TCTCCTTGCGAGGATCTGTGCACCGTTTGCGATGAGGACAACAAGATCGC
ATGCAGTCTGCTGGCCAACATGGACTTCATGAAAAAGCTAATGCGACGTA
TAGCCACACCCATTCTGGACCGAATGGAAGAGGTCAGCCACAAGCTGGAG
AAGTTCTACCTCACACTTGAGGCTTTTCTTAAGCAAACCGAAGCTTTATT
TAATCGTTTGGAAATAGTCAAGCAATGTGTGGTGGAGATCGAAGGTCTGA
GGACTCTTGTTCAGGAATACAACCTTACTTTTCTGGGAACCATGGAGGAA
CTGCAGGATATGCTCGACAGCAAGCTGGATAAGGTGCATATGCCTGCTCT
TAAGAAGTATATACGCGATCGCTTCGATGATATAGATCGCCGGCTGAGAT
TGATTGAGGATAAGGATGCATGTCCCAGGGCCGCTGGATTTATCAATACG
GGGCTATCTTGTCTATCCTGTAATAGTCCCAAAGTGGGTGTCGACGTCGG
TCCTCAAACCATGGGACTATTCCCGGACGCTCCGGTCAGGCACCTGCCTC
CCAAGTTAACCGGATCACCGGTAAATTGTCAGAAGATCGTGGTCTGTAGA
TCTGTGGAGAAGGAACCTACCCTAATGGTGCGAGTAAACAACCTTGATCT
GAGTGTCCTCTCCCAACGTCTTGCTCGTCCTGCCTCTGGCAAAGTCTGCA
AGTTGCCCGAAGCTAATGACGCCATCTATGGCGTTCGTAATTCCTGTATA
TCCGGTCAGGACCACTACCCAGTAGCAAGCTTTCTAGACCAT
BO07274.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:34:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10589-RA | 1161 | CG10589-PA | 1..1158 | 17..1174 | 5790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:34:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10589-RA | 1365 | CG10589-RA | 126..1283 | 17..1174 | 5790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:34:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20927951..20929108 | 17..1174 | 5790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:34:46 has no hits.
BO07274.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:17:26 Download gff for
BO07274.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 1..1161 | 17..1178 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:39:37 Download gff for
BO07274.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 126..1293 | 17..1187 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:10 Download gff for
BO07274.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 126..1283 | 17..1176 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:17:27 Download gff for
BO07274.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 126..1293 | 17..1187 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:44 Download gff for
BO07274.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10589-RA | 126..1283 | 17..1176 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:44 Download gff for
BO07274.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20927951..20929108 | 17..1176 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:10 Download gff for
BO07274.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20921051..20922208 | 17..1176 | 99 | | Plus |
BO07274.pep Sequence
Translation from 16 to 1192
> BO07274.pep
MPAHLDLTLEEMTRIALGVPELTHVNVAVLQSLLNVLLKKLNCQNDMVRI
SGFEGKCMERILEQSKISPLPFDVEAIVPISEQLDKVQELDKRIKQLECK
LECHFQQIRICNKAKDKKYKINQAEQYASPCEDLCTVCDEDNKIACSLLA
NMDFMKKLMRRIATPILDRMEEVSHKLEKFYLTLEAFLKQTEALFNRLEI
VKQCVVEIEGLRTLVQEYNLTFLGTMEELQDMLDSKLDKVHMPALKKYIR
DRFDDIDRRLRLIEDKDACPRAAGFINTGLSCLSCNSPKVGVDVGPQTMG
LFPDAPVRHLPPKLTGSPVNCQKIVVCRSVEKEPTLMVRVNNLDLSVLSQ
RLARPASGKVCKLPEANDAIYGVRNSCISGQDHYPVASFLDH
BO07274.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:45:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10589-PA | 386 | CG10589-PA | 1..386 | 1..386 | 1999 | 100 | Plus |
