Clone Sequence Records
BO07296.3prime Sequence
882 bp (829 high quality bases) assembled on 2005-12-04
> BO07296.3prime
ATGGTCTAGAAAGCTTGCGTCATCCAGCGAACTAACGCGCAATCCCTCGC
CGCCGGCAGTCGTAACATGAACACCAAAACCCGCCGATTCGAGCTCCTCT
TTAAGCTTCCAGTAGACCTCGTTGCACTCGTAGTTCTCTGGAAGCAGAAC
GATGACATAGCCACCTGCGCCGGCGCCCGTCAGCTTTGAAAAGAAGCCAC
GCTTAAAAGCGATGGTGAAGATTTGCTCCAGTTTCGGGTGCGACACTCCG
ATAGCCTTCAACAGATCATTGTTGATCTGGAACAGGCGTTCAAGTTGCTC
GAATTTCGAGCTATCGTCTTGGGCGTTGCCAAAGCTTTCGTAGAGTGGAA
CGGCGGCGGCAACAAGCTCCTCGCAAGCCTGCCAAATGGCCTCGATGAGC
TGCGGAAAGGCATCTCCCAGATGACGAACCTTGGCCACAATGTCGGCGGT
GCTGCGACTCACACGACTGTCCACCAGCAGGATGTTTAGTGGTTTCTGGA
TCTTCAGCGACTGGAAGCCCTGGCCCTTGACATACCGCAACATTCCGCCG
TAGGTGCATACAGTGTTGTCCAGACCCGAGGGCGTGCCATGATTAACACG
CTCCGATTCATAAGCCCAGGACGAGATCAACGCCTGGTTTGCCTCCGACA
AGTAGCTGTCTCTATCAAAGTGTCCGGCCAAAATGAGAAATGTCGTGGCC
AAAGCTGCTCCGAAAGAGGCGGAACTGCCCAAACCCGCACCCACGGTTAG
CTGGCTGTCTACCTGCACCTGGAAACCGGTTTGCAGCGTCAGTTTCTTGT
CGCCGGGTGCGGAGAGTACAGCGCCGGCCAGCAAATAGTATATGGAGATG
AATGCCCGCTGGGTGTGCTGCTTCGGTGCATT
BO07296.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33671-PA | 1173 | CG33671-RA | 307..1170 | 882..19 | 4320 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:11:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33672-RA | 1976 | CG33672-RA | 1022..1885 | 882..19 | 4320 | 100 | Minus |
CG33671-RB | 1517 | CG33671-RB | 563..1426 | 882..19 | 4320 | 100 | Minus |
CG33671-RA | 1976 | CG33671-RA | 1022..1885 | 882..19 | 4320 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:11:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12634257..12635120 | 19..882 | 4320 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 05:11:13 has no hits.
BO07296.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:43 Download gff for
BO07296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33009-PA | 307..1173 | 16..882 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:55:33 Download gff for
BO07296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33671-PA | 307..1173 | 16..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:47 Download gff for
BO07296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33672-RA | 1022..1891 | 13..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:38:18 Download gff for
BO07296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33671-RA | 1022..1891 | 13..882 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:38:18 Download gff for
BO07296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12634251..12635120 | 13..882 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:47 Download gff for
BO07296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8521756..8522625 | 13..882 | 99 | | Plus |
BO07296.5prime Sequence
766 bp (765 high quality bases) assembled on 2005-12-04
> BO07296.5prime
GAAGTTATCAGTCGACATGCTCAAGTTCCAGGTCCATTCTCCGGGCAAGG
TCATACTCCATGGCGAACACGCCGTGGTCTATCATCGTCCCGCCCTCGCC
GCCGTAGTGGGTTTGGGCACTACTCTGAGATTTCGGCAGCTGGAGGACAG
CCAGGTGGCAAGTTTTCAACTGGAGGCCCTTAACTGCACACTGGAGATCC
AGTTGCCGGAGTTCAATGGATTTTTGGCTGAATTTAGGAGTAAATACCCA
TCAGATAGCACGGCCAATCTGTTGGAAGCCGTCCGCGCAGAGGTGTCCAA
ACAACTTGAACGATCCGGAGGCAATGCACCGAAGCAGCACACCCAGCGGG
CATTCATCTCCATATACTATTTGCTGGCCGGCGCTGTACTCTCCGCACCC
GGCGACAAGAAACTGACGCTGCAAACCGGTTTCCAGGTGCAGGTAGACAG
CCAGCTAACCGTGGGTGCGGGTTTGGGCAGTTCCGCCTCTTTCGGAGCAG
CTTTGGCCACGACATTTCTCATTTTGGCCGGACACTTTGATAGAGACAGC
TACTTGTCGGAGGCAAACCAGGCGTTGATCTCGTCCTGGGCTTATGAATC
GGAGCGTGTTAATCATGGCACGCCCTCGGGTCTGGACAACACTGTATGCA
CCTACGGCGGAATGTTGCGGTATGTCAAGGGCCAGGGCTTCCAGTCGCTG
AAGATCCAGAAACCACTAAACATCCTGCTGGTGGACAGTCGTGTGAGTCG
CAGCACCGCCGACATT
BO07296.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33671-PA | 1173 | CG33671-RA | 1..750 | 17..766 | 3750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:40:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33672-RA | 1976 | CG33672-RA | 716..1465 | 17..766 | 3750 | 100 | Plus |
CG33671-RB | 1517 | CG33671-RB | 257..1006 | 17..766 | 3750 | 100 | Plus |
CG33671-RA | 1976 | CG33671-RA | 716..1465 | 17..766 | 3750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:39:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12634677..12635426 | 766..17 | 3750 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:40:02 has no hits.
BO07296.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:44 Download gff for
BO07296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33009-PA | 1..750 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:55:34 Download gff for
BO07296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33671-PA | 1..750 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:31:56 Download gff for
BO07296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33672-RA | 716..1465 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:22:11 Download gff for
BO07296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33671-RA | 716..1465 | 17..766 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:22:11 Download gff for
BO07296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12634677..12635426 | 17..766 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:31:56 Download gff for
BO07296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8522182..8522931 | 17..766 | 100 | | Minus |
BO07296.complete Sequence
1204 bp (1204 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630739
> BO07296.complete
GAAGTTATCAGTCGACATGCTCAAGTTCCAGGTCCATTCTCCGGGCAAGG
TCATACTCCATGGCGAACACGCCGTGGTCTATCATCGTCCCGCCCTCGCC
GCCGTAGTGGGTTTGGGCACTACTCTGAGATTTCGGCAGCTGGAGGACAG
CCAGGTGGCAAGTTTTCAACTGGAGGCCCTTAACTGCACACTGGAGATCC
AGTTGCCGGAGTTCAATGGATTTTTGGCTGAATTTAGGAGTAAATACCCA
TCAGATAGCACGGCCAATCTGTTGGAAGCCGTCCGCGCAGAGGTGTCCAA
ACAACTTGAACGATCCGGAGGCAATGCACCGAAGCAGCACACCCAGCGGG
CATTCATCTCCATATACTATTTGCTGGCCGGCGCTGTACTCTCCGCACCC
GGCGACAAGAAACTGACGCTGCAAACCGGTTTCCAGGTGCAGGTAGACAG
CCAGCTAACCGTGGGTGCGGGTTTGGGCAGTTCCGCCTCTTTCGGAGCAG
CTTTGGCCACGACATTTCTCATTTTGGCCGGACACTTTGATAGAGACAGC
TACTTGTCGGAGGCAAACCAGGCGTTGATCTCGTCCTGGGCTTATGAATC
GGAGCGTGTTAATCATGGCACGCCCTCGGGTCTGGACAACACTGTATGCA
CCTACGGCGGAATGTTGCGGTATGTCAAGGGCCAGGGCTTCCAGTCGCTG
AAGATCCAGAAACCACTAAACATCCTGCTGGTGGACAGTCGTGTGAGTCG
CAGCACCGCCGACATTGTGGCCAAGGTTCGTCATCTGGGAGATGCCTTTC
CGCAGCTCATCGAGGCCATTTGGCAGGCTTGCGAGGAGCTTGTTGCCGCC
GCCGTTCCACTCTACGAAAGCTTTGGCAACGCCCAAGACGATAGCTCGAA
ATTCGAGCAACTTGAACGCCTGTTCCAGATCAACAATGATCTGTTGAAGG
CTATCGGAGTGTCGCACCCGAAACTGGAGCAAATCTTCACCATCGCTTTT
AAGCGTGGCTTCTTTTCAAAGCTGACGGGCGCCGGCGCAGGTGGCTATGT
CATCGTTCTGCTTCCAGAGAACTACGAGTGCAACGAGGTCTACTGGAAGC
TTAAAGAGGAGCTCGAATCGGCGGGTTTTGGTGTTCATGTTACGACTGCC
GGCGGCGAGGGATTGCGCGTTAGTTCGCTGGATGACGCAAGCTTTCTAGA
CCAT
BO07296.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:03:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33671-RB | 1173 | CG33671-PB | 1..1170 | 17..1186 | 5850 | 100 | Plus |
CG33671-RA | 1173 | CG33671-PA | 1..1170 | 17..1186 | 5850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33672-RA | 1976 | CG33672-RA | 716..1885 | 17..1186 | 5850 | 100 | Plus |
CG33671-RB | 1517 | CG33671-RB | 257..1426 | 17..1186 | 5850 | 100 | Plus |
CG33671-RA | 1976 | CG33671-RA | 716..1885 | 17..1186 | 5850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:03:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12634257..12635426 | 1186..17 | 5850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 17:03:33 has no hits.
BO07296.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:17:18 Download gff for
BO07296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33671-RA | 1..1173 | 17..1189 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:39:29 Download gff for
BO07296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33672-RA | 736..1911 | 17..1192 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:46 Download gff for
BO07296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33672-RA | 716..1885 | 17..1188 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:17:19 Download gff for
BO07296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33672-RA | 736..1911 | 17..1192 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:35 Download gff for
BO07296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33671-RA | 716..1885 | 17..1188 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:33:35 Download gff for
BO07296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12634254..12635426 | 17..1188 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:46 Download gff for
BO07296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8521759..8522931 | 17..1188 | 99 | | Minus |
BO07296.pep Sequence
Translation from 16 to 1204
> BO07296.pep
MLKFQVHSPGKVILHGEHAVVYHRPALAAVVGLGTTLRFRQLEDSQVASF
QLEALNCTLEIQLPEFNGFLAEFRSKYPSDSTANLLEAVRAEVSKQLERS
GGNAPKQHTQRAFISIYYLLAGAVLSAPGDKKLTLQTGFQVQVDSQLTVG
AGLGSSASFGAALATTFLILAGHFDRDSYLSEANQALISSWAYESERVNH
GTPSGLDNTVCTYGGMLRYVKGQGFQSLKIQKPLNILLVDSRVSRSTADI
VAKVRHLGDAFPQLIEAIWQACEELVAAAVPLYESFGNAQDDSSKFEQLE
RLFQINNDLLKAIGVSHPKLEQIFTIAFKRGFFSKLTGAGAGGYVIVLLP
ENYECNEVYWKLKEELESAGFGVHVTTAGGEGLRVSSLDDASFLDH
BO07296.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:45:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33671-PB | 390 | CG33671-PB | 1..390 | 1..390 | 1981 | 100 | Plus |
CG33671-PA | 390 | CG33671-PA | 1..390 | 1..390 | 1981 | 100 | Plus |