Clone BO07296 Report

Search the DGRC for BO07296

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:72
Well:96
Vector:pDNR-Dual
Associated Gene/TranscriptCG33671-RA
Protein status:BO07296.pep: validated full length
Sequenced Size:1204

Clone Sequence Records

BO07296.3prime Sequence

882 bp (829 high quality bases) assembled on 2005-12-04

> BO07296.3prime
ATGGTCTAGAAAGCTTGCGTCATCCAGCGAACTAACGCGCAATCCCTCGC
CGCCGGCAGTCGTAACATGAACACCAAAACCCGCCGATTCGAGCTCCTCT
TTAAGCTTCCAGTAGACCTCGTTGCACTCGTAGTTCTCTGGAAGCAGAAC
GATGACATAGCCACCTGCGCCGGCGCCCGTCAGCTTTGAAAAGAAGCCAC
GCTTAAAAGCGATGGTGAAGATTTGCTCCAGTTTCGGGTGCGACACTCCG
ATAGCCTTCAACAGATCATTGTTGATCTGGAACAGGCGTTCAAGTTGCTC
GAATTTCGAGCTATCGTCTTGGGCGTTGCCAAAGCTTTCGTAGAGTGGAA
CGGCGGCGGCAACAAGCTCCTCGCAAGCCTGCCAAATGGCCTCGATGAGC
TGCGGAAAGGCATCTCCCAGATGACGAACCTTGGCCACAATGTCGGCGGT
GCTGCGACTCACACGACTGTCCACCAGCAGGATGTTTAGTGGTTTCTGGA
TCTTCAGCGACTGGAAGCCCTGGCCCTTGACATACCGCAACATTCCGCCG
TAGGTGCATACAGTGTTGTCCAGACCCGAGGGCGTGCCATGATTAACACG
CTCCGATTCATAAGCCCAGGACGAGATCAACGCCTGGTTTGCCTCCGACA
AGTAGCTGTCTCTATCAAAGTGTCCGGCCAAAATGAGAAATGTCGTGGCC
AAAGCTGCTCCGAAAGAGGCGGAACTGCCCAAACCCGCACCCACGGTTAG
CTGGCTGTCTACCTGCACCTGGAAACCGGTTTGCAGCGTCAGTTTCTTGT
CGCCGGGTGCGGAGAGTACAGCGCCGGCCAGCAAATAGTATATGGAGATG
AATGCCCGCTGGGTGTGCTGCTTCGGTGCATT

BO07296.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG33671-PA 1173 CG33671-RA 307..1170 882..19 4320 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:11:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG33672-RA 1976 CG33672-RA 1022..1885 882..19 4320 100 Minus
CG33671-RB 1517 CG33671-RB 563..1426 882..19 4320 100 Minus
CG33671-RA 1976 CG33671-RA 1022..1885 882..19 4320 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:11:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12634257..12635120 19..882 4320 100 Plus
Blast to na_te.dros performed on 2015-02-11 05:11:13 has no hits.

BO07296.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:43 Download gff for BO07296.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33009-PA 307..1173 16..882 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:55:33 Download gff for BO07296.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33671-PA 307..1173 16..882 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:47 Download gff for BO07296.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33672-RA 1022..1891 13..882 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:38:18 Download gff for BO07296.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33671-RA 1022..1891 13..882 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:38:18 Download gff for BO07296.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12634251..12635120 13..882 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:47 Download gff for BO07296.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8521756..8522625 13..882 99   Plus

BO07296.5prime Sequence

766 bp (765 high quality bases) assembled on 2005-12-04

> BO07296.5prime
GAAGTTATCAGTCGACATGCTCAAGTTCCAGGTCCATTCTCCGGGCAAGG
TCATACTCCATGGCGAACACGCCGTGGTCTATCATCGTCCCGCCCTCGCC
GCCGTAGTGGGTTTGGGCACTACTCTGAGATTTCGGCAGCTGGAGGACAG
CCAGGTGGCAAGTTTTCAACTGGAGGCCCTTAACTGCACACTGGAGATCC
AGTTGCCGGAGTTCAATGGATTTTTGGCTGAATTTAGGAGTAAATACCCA
TCAGATAGCACGGCCAATCTGTTGGAAGCCGTCCGCGCAGAGGTGTCCAA
ACAACTTGAACGATCCGGAGGCAATGCACCGAAGCAGCACACCCAGCGGG
CATTCATCTCCATATACTATTTGCTGGCCGGCGCTGTACTCTCCGCACCC
GGCGACAAGAAACTGACGCTGCAAACCGGTTTCCAGGTGCAGGTAGACAG
CCAGCTAACCGTGGGTGCGGGTTTGGGCAGTTCCGCCTCTTTCGGAGCAG
CTTTGGCCACGACATTTCTCATTTTGGCCGGACACTTTGATAGAGACAGC
TACTTGTCGGAGGCAAACCAGGCGTTGATCTCGTCCTGGGCTTATGAATC
GGAGCGTGTTAATCATGGCACGCCCTCGGGTCTGGACAACACTGTATGCA
CCTACGGCGGAATGTTGCGGTATGTCAAGGGCCAGGGCTTCCAGTCGCTG
AAGATCCAGAAACCACTAAACATCCTGCTGGTGGACAGTCGTGTGAGTCG
CAGCACCGCCGACATT

BO07296.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG33671-PA 1173 CG33671-RA 1..750 17..766 3750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:40:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG33672-RA 1976 CG33672-RA 716..1465 17..766 3750 100 Plus
CG33671-RB 1517 CG33671-RB 257..1006 17..766 3750 100 Plus
CG33671-RA 1976 CG33671-RA 716..1465 17..766 3750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12634677..12635426 766..17 3750 100 Minus
Blast to na_te.dros performed on 2015-02-13 01:40:02 has no hits.

BO07296.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:44 Download gff for BO07296.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33009-PA 1..750 17..766 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:55:34 Download gff for BO07296.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33671-PA 1..750 17..766 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:31:56 Download gff for BO07296.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33672-RA 716..1465 17..766 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:22:11 Download gff for BO07296.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33671-RA 716..1465 17..766 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:22:11 Download gff for BO07296.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12634677..12635426 17..766 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:31:56 Download gff for BO07296.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8522182..8522931 17..766 100   Minus

BO07296.complete Sequence

1204 bp (1204 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630739

> BO07296.complete
GAAGTTATCAGTCGACATGCTCAAGTTCCAGGTCCATTCTCCGGGCAAGG
TCATACTCCATGGCGAACACGCCGTGGTCTATCATCGTCCCGCCCTCGCC
GCCGTAGTGGGTTTGGGCACTACTCTGAGATTTCGGCAGCTGGAGGACAG
CCAGGTGGCAAGTTTTCAACTGGAGGCCCTTAACTGCACACTGGAGATCC
AGTTGCCGGAGTTCAATGGATTTTTGGCTGAATTTAGGAGTAAATACCCA
TCAGATAGCACGGCCAATCTGTTGGAAGCCGTCCGCGCAGAGGTGTCCAA
ACAACTTGAACGATCCGGAGGCAATGCACCGAAGCAGCACACCCAGCGGG
CATTCATCTCCATATACTATTTGCTGGCCGGCGCTGTACTCTCCGCACCC
GGCGACAAGAAACTGACGCTGCAAACCGGTTTCCAGGTGCAGGTAGACAG
CCAGCTAACCGTGGGTGCGGGTTTGGGCAGTTCCGCCTCTTTCGGAGCAG
CTTTGGCCACGACATTTCTCATTTTGGCCGGACACTTTGATAGAGACAGC
TACTTGTCGGAGGCAAACCAGGCGTTGATCTCGTCCTGGGCTTATGAATC
GGAGCGTGTTAATCATGGCACGCCCTCGGGTCTGGACAACACTGTATGCA
CCTACGGCGGAATGTTGCGGTATGTCAAGGGCCAGGGCTTCCAGTCGCTG
AAGATCCAGAAACCACTAAACATCCTGCTGGTGGACAGTCGTGTGAGTCG
CAGCACCGCCGACATTGTGGCCAAGGTTCGTCATCTGGGAGATGCCTTTC
CGCAGCTCATCGAGGCCATTTGGCAGGCTTGCGAGGAGCTTGTTGCCGCC
GCCGTTCCACTCTACGAAAGCTTTGGCAACGCCCAAGACGATAGCTCGAA
ATTCGAGCAACTTGAACGCCTGTTCCAGATCAACAATGATCTGTTGAAGG
CTATCGGAGTGTCGCACCCGAAACTGGAGCAAATCTTCACCATCGCTTTT
AAGCGTGGCTTCTTTTCAAAGCTGACGGGCGCCGGCGCAGGTGGCTATGT
CATCGTTCTGCTTCCAGAGAACTACGAGTGCAACGAGGTCTACTGGAAGC
TTAAAGAGGAGCTCGAATCGGCGGGTTTTGGTGTTCATGTTACGACTGCC
GGCGGCGAGGGATTGCGCGTTAGTTCGCTGGATGACGCAAGCTTTCTAGA
CCAT

BO07296.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG33671-RB 1173 CG33671-PB 1..1170 17..1186 5850 100 Plus
CG33671-RA 1173 CG33671-PA 1..1170 17..1186 5850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG33672-RA 1976 CG33672-RA 716..1885 17..1186 5850 100 Plus
CG33671-RB 1517 CG33671-RB 257..1426 17..1186 5850 100 Plus
CG33671-RA 1976 CG33671-RA 716..1885 17..1186 5850 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12634257..12635426 1186..17 5850 100 Minus
Blast to na_te.dros performed on 2014-11-27 17:03:33 has no hits.

BO07296.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:17:18 Download gff for BO07296.complete
Subject Subject Range Query Range Percent Splice Strand
CG33671-RA 1..1173 17..1189 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:39:29 Download gff for BO07296.complete
Subject Subject Range Query Range Percent Splice Strand
CG33672-RA 736..1911 17..1192 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:46 Download gff for BO07296.complete
Subject Subject Range Query Range Percent Splice Strand
CG33672-RA 716..1885 17..1188 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:17:19 Download gff for BO07296.complete
Subject Subject Range Query Range Percent Splice Strand
CG33672-RA 736..1911 17..1192 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:35 Download gff for BO07296.complete
Subject Subject Range Query Range Percent Splice Strand
CG33671-RA 716..1885 17..1188 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:33:35 Download gff for BO07296.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12634254..12635426 17..1188 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:46 Download gff for BO07296.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8521759..8522931 17..1188 99   Minus

BO07296.pep Sequence

Translation from 16 to 1204

> BO07296.pep
MLKFQVHSPGKVILHGEHAVVYHRPALAAVVGLGTTLRFRQLEDSQVASF
QLEALNCTLEIQLPEFNGFLAEFRSKYPSDSTANLLEAVRAEVSKQLERS
GGNAPKQHTQRAFISIYYLLAGAVLSAPGDKKLTLQTGFQVQVDSQLTVG
AGLGSSASFGAALATTFLILAGHFDRDSYLSEANQALISSWAYESERVNH
GTPSGLDNTVCTYGGMLRYVKGQGFQSLKIQKPLNILLVDSRVSRSTADI
VAKVRHLGDAFPQLIEAIWQACEELVAAAVPLYESFGNAQDDSSKFEQLE
RLFQINNDLLKAIGVSHPKLEQIFTIAFKRGFFSKLTGAGAGGYVIVLLP
ENYECNEVYWKLKEELESAGFGVHVTTAGGEGLRVSSLDDASFLDH

BO07296.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:45:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG33671-PB 390 CG33671-PB 1..390 1..390 1981 100 Plus
CG33671-PA 390 CG33671-PA 1..390 1..390 1981 100 Plus