Clone Sequence Records
BO07306.5prime Sequence
842 bp (841 high quality bases) assembled on 2005-12-04
> BO07306.5prime
GAAGTTATCAGTCGACATGAGCGGTTCCGTATTGAGTTTGGCGCGTCCTG
CAGCAGCCACAAATGGCCATAATCTGCTGACCAAACAGCTGAATTGCAAT
GGCAATGGCACCACCGGTGGCGCGGCGAAAACCACTGTGGCCTCGGCCAT
AACACCGCCCAAGCAGCCCCAGTTGGCGGCCAAGGTCATCCAGCAGTCGC
AGATCGTCTGTTTCGATGTGGACTCCACGGTGATTTGCGAGGAGGGCATC
GACGAACTGGCCGAATATTGTGGCAAGGGGAGCGAGGTGGCTCGCGTTAC
CAAGGAGGCGATGGGCGGTGCCATGACCTTCCAGGATGCCCTCAAAATTC
GCTTGAACATCATACGGCCGACACAGCAGCAAGTGAGGGATTTCATCCAG
GAGCGACCCAGTACACTGAGCAAAAACGTGAAGCGTTTCGTCAGCCATTT
GAAGGCGGAGGGAAAACAGGTTTACTTGATCTCCGGCGGATTCGATTGCC
TAATTGCGCCCGTGGCCAATGAATTGGGTATTCCCCTGAAAAACGTCTAT
GCCAACAAGATGCTGTTCGATTATTTGGGCGAATACGATAGCTTTGATAT
CAACCAGCCCACTTCGCGTTCCGGCGGAAAGGCAGAGGCTATCGCCCTGA
TAAGGAAGGAGAATAGCGACGATTCCCTAATCACCATGATCGGCGATGGA
GCCACCGATCTGGAGGCCGTACCGCCAGCCAACTACTTTATAGGTTTCGG
TGGCAATGTCGTGCGGCCGGAGGTCTATCGCCGTGCACAGTATTACGTAA
CGGATTTTGAGCAGCTGATGGGGCAGGCAAGCTTTCTAGACC
BO07306.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3705-PA | 813 | aay-RA | 1..810 | 17..826 | 4050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 09:57:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aay-RA | 1529 | CG3705-RA | 292..1107 | 11..826 | 4065 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 09:57:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9423544..9424359 | 11..826 | 4065 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 09:57:57 has no hits.
BO07306.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:56 Download gff for
BO07306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-PA | 1..813 | 17..829 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:55:47 Download gff for
BO07306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3705-PA | 1..813 | 17..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:44:26 Download gff for
BO07306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 284..1107 | 4..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:56:56 Download gff for
BO07306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 284..1107 | 4..826 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:56:56 Download gff for
BO07306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9423536..9424359 | 4..826 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:44:26 Download gff for
BO07306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9416636..9417459 | 4..826 | 99 | | Plus |
BO07306.3prime Sequence
842 bp (841 high quality bases) assembled on 2005-12-04
> BO07306.3prime
ATGGTCTAGAAAGCTTGCCTGCCCCATCAGCTGCTCAAAATCCGTTACGT
AATACTGTGCACGGCGATAGACCTCCGGCCGCACGACATTGCCACCGAAA
CCTATAAAGTAGTTGGCTGGCGGTACGGCCTCCAGATCGGTGGCTCCATC
GCCGATCATGGTGATTAGGGAATCGTCGCTATTCTCCTTCCTTATCAGGG
CGATAGCCTCTGCCTTTCCGCCGGAACGCGAAGTGGGCTGGTTGATATCA
AAGCTATCGTATTCGCCCAAATAATCGAACAGCATCTTGTTGGCATAGAC
GTTTTTCAGGGGAATACCCAATTCATTGGCCACGGGCGCAATTAGGCAAT
CGAATCCGCCGGAGATCAAGTAAACCTGTTTTCCCTCCGCCTTCAAATGG
CTGACGAAACGCTTCACGTTTTTGCTCAGTGTACTGGGTCGCTCCTGGAT
GAAATCCCTCACTTGCTGCTGTGTCGGCCGTATGATGTTCAAGCGAATTT
TGAGGGCATCCTGGAAGGTCATGGCACCGCCCATCGCCTCCTTGGTAACG
CGAGCCACCTCGCTCCCCTTGCCACAATATTCGGCCAGTTCGTCGATGCC
CTCCTCGCAAATCACCGTGGAGTCCACATCGAAACAGACGATCTGCGACT
GCTGGATGACCTTGGCCGCCAACTGGGGCTGCTTGGGCGGTGTTATGGCC
GAGGCCACAGTGGTTTTCGCCGCGCCACCGGTGGTGCCATTGCCATTGCA
ATTCAGCTGTTTGGTCAGCAGATTATGGCCATTTGTGGCTGCTGCAGGAC
GCGCCAAACTCAATACGGAACCGCTCATGTCGACTGATAACT
BO07306.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3705-PA | 813 | aay-RA | 1..810 | 828..19 | 4050 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 09:57:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aay-RA | 1529 | CG3705-RA | 292..1107 | 834..19 | 4065 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 09:57:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9423544..9424359 | 834..19 | 4065 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 09:57:52 has no hits.
BO07306.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:55 Download gff for
BO07306.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-PA | 1..813 | 16..828 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:55:45 Download gff for
BO07306.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3705-PA | 1..813 | 16..828 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:44:23 Download gff for
BO07306.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 284..1107 | 19..841 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:56:50 Download gff for
BO07306.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 284..1107 | 19..841 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:56:50 Download gff for
BO07306.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9423536..9424359 | 19..841 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:44:23 Download gff for
BO07306.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9416636..9417459 | 19..841 | 99 | | Minus |
BO07306.complete Sequence
844 bp (844 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630744
> BO07306.complete
GAAGTTATCAGTCGACATGAGCGGTTCCGTATTGAGTTTGGCGCGTCCTG
CAGCAGCCACAAATGGCCATAATCTGCTGACCAAACAGCTGAATTGCAAT
GGCAATGGCACCACCGGTGGCGCGGCGAAAACCACTGTGGCCTCGGCCAT
AACACCGCCCAAGCAGCCCCAGTTGGCGGCCAAGGTCATCCAGCAGTCGC
AGATCGTCTGTTTCGATGTGGACTCCACGGTGATTTGCGAGGAGGGCATC
GACGAACTGGCCGAATATTGTGGCAAGGGGAGCGAGGTGGCTCGCGTTAC
CAAGGAGGCGATGGGCGGTGCCATGACCTTCCAGGATGCCCTCAAAATTC
GCTTGAACATCATACGGCCGACACAGCAGCAAGTGAGGGATTTCATCCAG
GAGCGACCCAGTACACTGAGCAAAAACGTGAAGCGTTTCGTCAGCCATTT
GAAGGCGGAGGGAAAACAGGTTTACTTGATCTCCGGCGGATTCGATTGCC
TAATTGCGCCCGTGGCCAATGAATTGGGTATTCCCCTGAAAAACGTCTAT
GCCAACAAGATGCTGTTCGATTATTTGGGCGAATACGATAGCTTTGATAT
CAACCAGCCCACTTCGCGTTCCGGCGGAAAGGCAGAGGCTATCGCCCTGA
TAAGGAAGGAGAATAGCGACGATTCCCTAATCACCATGATCGGCGATGGA
GCCACCGATCTGGAGGCCGTACCGCCAGCCAACTACTTTATAGGTTTCGG
TGGCAATGTCGTGCGGCCGGAGGTCTATCGCCGTGCACAGTATTACGTAA
CGGATTTTGAGCAGCTGATGGGGCAGGCAAGCTTTCTAGACCAT
BO07306.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aay-RA | 813 | CG3705-PA | 1..810 | 17..826 | 4050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aay-RA | 1529 | CG3705-RA | 292..1107 | 11..826 | 4065 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9423544..9424359 | 11..826 | 4065 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:19:04 has no hits.
BO07306.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:55 Download gff for
BO07306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 1..813 | 17..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:05 Download gff for
BO07306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 284..1107 | 4..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:39:44 Download gff for
BO07306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 298..1107 | 17..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:55 Download gff for
BO07306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 284..1107 | 4..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:30 Download gff for
BO07306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 298..1107 | 17..828 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:30 Download gff for
BO07306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9423550..9424359 | 17..828 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:39:44 Download gff for
BO07306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9416650..9417459 | 17..828 | 99 | | Plus |
BO07306.pep Sequence
Translation from 16 to 844
> BO07306.pep
MSGSVLSLARPAAATNGHNLLTKQLNCNGNGTTGGAAKTTVASAITPPKQ
PQLAAKVIQQSQIVCFDVDSTVICEEGIDELAEYCGKGSEVARVTKEAMG
GAMTFQDALKIRLNIIRPTQQQVRDFIQERPSTLSKNVKRFVSHLKAEGK
QVYLISGGFDCLIAPVANELGIPLKNVYANKMLFDYLGEYDSFDINQPTS
RSGGKAEAIALIRKENSDDSLITMIGDGATDLEAVPPANYFIGFGGNVVR
PEVYRRAQYYVTDFEQLMGQASFLDH
BO07306.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aay-PA | 270 | CG3705-PA | 1..270 | 1..270 | 1380 | 100 | Plus |
