Clone Sequence Records
BO07307.3prime Sequence
790 bp (714 high quality bases) assembled on 2005-12-04
> BO07307.3prime
ATGGTCTAGAAAGCTTGCGCACGCCAGTTGTCCGCAGATTGCGCCCGTTT
CGCTAGCCGACCAAGCGATTCTGGGCCGTGGGGCTGGCGAGGATGGCGTC
GAAGGCTCAGAGTCACCAATGAAAACGGCCGAATCATCAGCACTGGACGG
GGACAGCGGTCTGTCGCTGTTTGCTCCGATTTCCGAAATGGGTATGGAGA
GAGAGGTTGTCGCCTCCTCGCTGAGCGGAACAATTTCCTTGAAACTCTGA
TTCGGTGGCATTACCACCAGCATGTTTATTGAAATGAGAAGTGGATGCAC
CAACTTTGGGTCTAACACCATGAGTGGCACCTCCTCGTTCTTTTCGAGGC
TAAGAGAACAGATCTCGGACGTTTGGGTGAAGACTGCCTGGCGCTGGGCG
TTTATCGAGGTCACCGTGGTGCGGACCATGAACTTGCGTTTCGTCTGCAG
GCTAAGCACTCGCTCGTGCTCGTGCCGGTGGTGCCGACGAATGTTCAGTC
TACGCGAGTCCATGATCAGGATGAGATCCATGCCAAAGTTGAAGCCCGTC
CAGCGCCACTTCTGGTAGCCAGGCTCAAGCAACATACGTCCGCATCGCAT
GCAGTTCTCAAAGAACTGCTCATCGTCCAGCTGCTGAGGACTACAATCCT
CCTGCCCATGATCGATACGTAGTAATGCATCCCAGTGGTTGTGAATGTGC
CGATACAGCCACTCCTTGGGTATAATATTGTCATTGTATATGATTTTTAG
ATCCATGTAGTGGTTGGTCAGGTACTGGGTTCGTAGCTTC
BO07307.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:59:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8411-PA | 1710 | gcl-RA | 936..1707 | 790..19 | 3860 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:35:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gcl-RA | 2464 | CG8411-RA | 1166..1937 | 790..19 | 3860 | 100 | Minus |
| gcl-RB | 2506 | CG8411-RB | 1211..1979 | 790..19 | 3805 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:35:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8727847..8728472 | 644..19 | 3130 | 100 | Minus |
| 2R | 25286936 | 2R | 8727631..8727777 | 790..644 | 735 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 03:35:54 has no hits.
BO07307.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:56 Download gff for
BO07307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-PA | 936..1710 | 16..790 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:55:48 Download gff for
BO07307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8411-PA | 936..1710 | 16..790 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:55:21 Download gff for
BO07307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-RA | 1166..1942 | 13..790 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:50:34 Download gff for
BO07307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-RA | 1166..1942 | 13..790 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:50:34 Download gff for
BO07307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8727631..8727777 | 644..790 | 100 | -> | Minus |
| 2R | 8727848..8728471 | 20..643 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:55:21 Download gff for
BO07307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4615136..4615282 | 644..790 | 100 | -> | Minus |
| arm_2R | 4615353..4615976 | 20..643 | 100 | <- | Minus |
BO07307.5prime Sequence
869 bp (852 high quality bases) assembled on 2005-12-04
> BO07307.5prime
GAAGTTATCAGTCGACATGGGTCAAATAGTGGGATCCATGCATATGAACG
TCGCTGAGGTGTTCAGCAATCGACGGAAGCGGAAGCGCAGCACTGATTCA
TCTTTGGGGAAGGATGATCCGGCCCAGTTAGACACCACTCAGCCCAAAAA
AAAAAAACTTCTTACTACCACCCAGTACATATACAAGGCGCTCTTCAAGG
AGGAAAAGAACTCGGATGTGGCTGTCATGGCTCTGGATAAGGTCTGGCAC
CTGCATAAGGTGTACCTGAGCCAGAGTCCATACTTCTATACTATGTTCAA
TGGGACGTGGCGGGAAGCCCAGCAGAATTTCATTCAGATCACAATCCTGG
ACGACCGGATCACCGTTGCTAGCCTGGATGCTGTCTTTGGTTCCATGTAT
TCCGATGAGATCGAAATCGAGTCAGCAGATGTTATCTCGGTATTGGCCAC
AGCCACGTTGTTCCACTTAGACGGAATCATCGACAAGTGTGCCGAGGTGA
TGGTGGATAACATTAGTCCGGAGACAGCTATCCAGTATTACGAGGCCGCC
TGCCAGTACGGTGTGGTCGGAGTCAAGAAGTCCACCTTTCAGTGGTTCCA
GATCAATCTGCTAAGCATTTATAGTAAGCAACCGAACCTGCTTAGGCACA
TCTCCATTGAGCTGATGAGTGCCCTGACCGCCAGTCCCGATTTGTATGTG
ATGCAGACGGAGTTCTCGCTGTACACTCTACTGCGCACATGGATGTTCCT
ACGACTGCATCCCGACTACGATCCAGAGGACCCGGTCCAGCGGGCGGAGG
CGCTAAAGACGCANGAGCTTTTGGTTATGCCGGCGTGGAACGCATGCGCC
TAGTGGTGATGTCGTCCAG
BO07307.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:00:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8411-PA | 1710 | gcl-RA | 1..811 | 17..827 | 4036 | 99.8 | Plus |
| CG8411-PA | 1710 | gcl-RA | 825..855 | 839..869 | 155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:40:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gcl-RB | 2506 | CG8411-RB | 275..1130 | 16..869 | 4219 | 99.6 | Plus |
| gcl-RA | 2464 | CG8411-RA | 230..1085 | 16..869 | 4219 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:40:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8726830..8727550 | 151..869 | 3494 | 99.6 | Plus |
| 2R | 25286936 | 2R | 8726637..8726771 | 16..150 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:40:32 has no hits.
BO07307.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:14:57 Download gff for
BO07307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-PA | 1..855 | 17..869 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:55:49 Download gff for
BO07307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8411-PA | 1..855 | 17..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:31:58 Download gff for
BO07307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-RA | 225..1085 | 8..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:23:39 Download gff for
BO07307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-RA | 225..1085 | 8..869 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:23:39 Download gff for
BO07307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8726632..8726771 | 8..150 | 97 | -> | Plus |
| 2R | 8726830..8727550 | 151..869 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:31:58 Download gff for
BO07307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4614137..4614276 | 8..150 | 97 | -> | Plus |
| arm_2R | 4614335..4615055 | 151..869 | 99 | | Plus |
BO07307.complete Sequence
1741 bp assembled on 2008-08-15
GenBank Submission: FJ630745
> BO07307.complete
GAAGTTATCAGTCGACATGGGTCAAATAGTGGGATCCATGCATATGAACG
TCGCTGAGGTGTTCAGCAATCGACGGAAGCGGAAGCGCAGCACTGATTCA
TCTTTGGGGAAGGATGATCCGGCCCAGTTAGACACCACTCAGCCCAAAAA
AAAAAAACTTCTTACTACCACCCAGTACATATACAAGGCGCTCTTCAAGG
AGGAAAAGAACTCGGATGTGGCTGTCATGGCTCTGGATAAGGTCTGGCAC
CTGCATAAGGTGTACCTGAGCCAGAGTCCATACTTCTATACTATGTTCAA
TGGGACGTGGCGGGAAGCCCAGCAGAATTTCATTCAGATCACAATCCTGG
ACGACCGGATCACCGTTGCTAGCCTGGATGCTGTCTTTGGTTCCATGTAT
TCCGATGAGATCGAAATCGAGTCAGCAGATGTTATCTCGGTATTGGCCAC
AGCCACGTTGTTCCACTTAGACGGAATCATCGACAAGTGTGCCGAGGTGA
TGGTGGATAACATTAGTCCGGAGACAGCTATCCAGTATTACGAGGCCGCC
TGCCAGTACGGTGTGGTCGGAGTCAAGAAGTCCACCTTTCAGTGGTTCCA
GATCAATCTGCTAAGCATTTATAGTAAGCAACCGAACCTGCTTAGGCACA
TCTCCATTGAGCTGATGAGTGCCCTGACCGCCAGTCCCGATTTGTATGTG
ATGCAGACGGAGTTCTCGCTGTACACTCTACTGCGCACATGGATGTTCCT
ACGACTGCATCCCGACTACGATCCAGAGGACCCGGTCCAGCGGGCGGAGG
CGCTAAAGACGCAGGAGCTTTTGGTTAATGCCGGCGTGGAAACGCATGCG
CCTAGTGGTGATGTCGTCCAGTGGACATACTTTACCAGCCGCTCGGAGGA
ACGCTCGTTCTTGGCCACGCCCGAGGGGCAGCCTTATGTGAAGGTCTTTC
AGAAGCTACGAACCCAGTACCTGACCAACCACTACATGGATCTAAAAATC
ATATACAATGACAATATTATACCCAAGGAGTGGCTGTATCGGCACATTCA
CAACCACTGGGATGCATTACTACGTATCGATCATGGGCAGGAGGATTGTA
GTCCTCAGCAGCTGGACGATGAGCAGTTCTTTGAGAACTGCATGCGATGC
GGACGTATGTTGCTTGAGCCTGGCTACCAGAAGTGGCGCTGGACGGGCTT
CAACTTTGGCATGGATCTCATCCTGATCATGGACTCGCGTAGACTGAACA
TTCGTCGGCACCACCGGCACGAGCACGAGCGAGTGCTTAGCCTGCAGACG
AAACGCAAGTTCATGGTCCGCACCACGGTGACCTCGATAAACGCCCAGCG
CCAGGCAGTCTTCACCCAAACGTCCGAGATCTGTTCTCTTAGCCTCGAAA
AGAACGAGGAGGTGCCACTCATGGTGTTAGACCCAAAGTTGGTGCATCCA
CTTCTCATTTCAATAAACATGCTGGTGGTAATGCCACCGAATCAGAGTTT
CAAGGAAATTGTTCCGCTCAGCGAGGAGGCGACAACCTCTCTCTCCATAC
CCATTTCGGAAATCGGAGCAAACAGCGACAGACCGCTGTCCCCGTCCAGT
GCTGATGATTCGGCCGTTTTCATTGGTGACTCTGAGCCTTCGACGCCATC
CTCGCCAGCCCCACGGCCCAGAATCGCTTGGTCGGCTAGCGAAACGGGCG
CAATCTGCGGACAACTGGCGTGCGCAAGCTTTCTAGACCAT
BO07307.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:35:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gcl-RA | 1710 | CG8411-PA | 1..1707 | 17..1723 | 8535 | 100 | Plus |
| gcl-RB | 1707 | CG8411-PB | 1..1704 | 17..1723 | 8455 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:35:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gcl-RA | 2464 | CG8411-RA | 230..1937 | 16..1723 | 8540 | 100 | Plus |
| gcl-RB | 2506 | CG8411-RB | 275..1979 | 16..1723 | 8460 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:35:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8726830..8727777 | 151..1098 | 4740 | 100 | Plus |
| 2R | 25286936 | 2R | 8727847..8728472 | 1098..1723 | 3130 | 100 | Plus |
| 2R | 25286936 | 2R | 8726637..8726771 | 16..150 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:35:12 has no hits.
BO07307.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:48:45 Download gff for
BO07307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-RA | 223..1940 | 8..1729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:15 Download gff for
BO07307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-RA | 231..1937 | 17..1725 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:12:32 Download gff for
BO07307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-RA | 229..1935 | 17..1725 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:14 Download gff for
BO07307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcl-RA | 231..1937 | 17..1725 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:14 Download gff for
BO07307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8726638..8726771 | 17..150 | 100 | -> | Plus |
| 2R | 8726830..8727777 | 151..1098 | 100 | -> | Plus |
| 2R | 8727848..8728472 | 1099..1725 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:15 Download gff for
BO07307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4614143..4614276 | 17..150 | 100 | -> | Plus |
| arm_2R | 4614335..4615282 | 151..1098 | 100 | -> | Plus |
| arm_2R | 4615353..4615977 | 1099..1725 | 99 | | Plus |
BO07307.pep Sequence
Translation from 16 to 1741
> BO07307.pep
MGQIVGSMHMNVAEVFSNRRKRKRSTDSSLGKDDPAQLDTTQPKKKKLLT
TTQYIYKALFKEEKNSDVAVMALDKVWHLHKVYLSQSPYFYTMFNGTWRE
AQQNFIQITILDDRITVASLDAVFGSMYSDEIEIESADVISVLATATLFH
LDGIIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLS
IYSKQPNLLRHISIELMSALTASPDLYVMQTEFSLYTLLRTWMFLRLHPD
YDPEDPVQRAEALKTQELLVNAGVETHAPSGDVVQWTYFTSRSEERSFLA
TPEGQPYVKVFQKLRTQYLTNHYMDLKIIYNDNIIPKEWLYRHIHNHWDA
LLRIDHGQEDCSPQQLDDEQFFENCMRCGRMLLEPGYQKWRWTGFNFGMD
LILIMDSRRLNIRRHHRHEHERVLSLQTKRKFMVRTTVTSINAQRQAVFT
QTSEICSLSLEKNEEVPLMVLDPKLVHPLLISINMLVVMPPNQSFKEIVP
LSEEATTSLSIPISEIGANSDRPLSPSSADDSAVFIGDSEPSTPSSPAPR
PRIAWSASETGAICGQLACASFLDH
BO07307.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:40:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gcl-PA | 569 | CG8411-PA | 1..569 | 1..569 | 2972 | 100 | Plus |
| gcl-PB | 568 | CG8411-PB | 1..568 | 1..569 | 2956 | 99.8 | Plus |
| Keap1-PC | 744 | CG3962-PC | 58..229 | 66..243 | 159 | 25.7 | Plus |
| Keap1-PA | 744 | CG3962-PA | 58..229 | 66..243 | 159 | 25.7 | Plus |
| Keap1-PB | 776 | CG3962-PB | 90..261 | 66..243 | 159 | 25.7 | Plus |
