Clone BO07322 Report

Search the DGRC for BO07322

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:73
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG2263-RA
Protein status:BO07322.pep: validated full length
Sequenced Size:1528

Clone Sequence Records

BO07322.3prime Sequence

951 bp (876 high quality bases) assembled on 2005-12-04

> BO07322.3prime
ATGGTCTAGAAAGCTTGCAGCATGATCCAGCCGGCAGATGGGGCCCTCCT
CCACCATCTTTAGATCCACTTTGGGTCCGACCAAATCGCGAATGTTGTTG
ATGCCGTACTTGATCATGGTGGGTCGCTCCAGCGACAGACCCCAGGCGAT
TACATTCACGTTCTCCGGCAGTCCCATGGGCAGCAGCATCTCCGGCCGGA
AGACGCCCGAGTTGCCCACCTCGATCCACTTGGCCAGGCCGGGGTGATAG
CAGAAGATCTCCATGCTGGGCTCGGTGTACGGATTGTACGCCGGCTTGAA
TTCAAGCTGCGTGATGCCCAGCTTTCTGAAGAACTCGTACAGCGTGCCAA
TGAGATCGCCCAGCGTCAGACCAACATCTGCAATCACGCCCTCCACCTGA
TGGAACTCCGCCAGATGTGTGGCGTCCAGTGTTTCGTTGCGGAACACCTT
GTCGATGCTGAAGTACTTGGCTGCTTTGAAGCCGCCCTCCTGGTTGGCCA
GCTTGTACAGCATCCTCGCACTCACGGCCGTCGTATGCGTGCGCAGTAGA
TTCTTCTGCGCCTCCTCCAGCTTCCAGTCGTAGCCGTAACCCTTCGATCC
ATAGCCACCCACAGAGTGCACCTTCTTCACGCGCTCCAGATAGTCCTGCG
GAAACTTGTGGCTTTTGGCCGGATGATTCACGAAGAAGGTGTCGTGGGCA
TCGCGAGCTGGATGCTGTTGCGGCTGATAGAGCGCATCGAAGTTCCAGAA
TGACGATTCCACATAGTTGTTCGTAGGCATCTCTGAGAAGCCCATCTCGA
GGAATATCTGCCGGAACTCAGTGCGCACTTTGAGCAAGGGATGGAGATGT
CCACGCGTTGGTGGTGCACCCAACGCATCAAAGTTATAGGCCTTGAACTT
GAGCTGGTCCACAATCCATTTGCGAGCATTTCCACCGTGAGATCCGTCTC
C

BO07322.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG2263-PA 1497 CG2263-RA 603..1494 910..19 4460 100 Minus
CG2263-PA 1497 CG2263-RA 561..603 951..909 215 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:32:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG2263-RA 1699 CG2263-RA 668..1601 951..19 4645 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:32:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8144002..8144935 19..951 4620 99.9 Plus
Blast to na_te.dros performed on 2015-02-09 19:32:45 has no hits.

BO07322.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:15:24 Download gff for BO07322.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2263-PA 561..1497 15..951 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:56:26 Download gff for BO07322.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2263-PA 561..1497 15..951 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:08:51 Download gff for BO07322.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2263-RA 668..1610 11..951 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:20:05 Download gff for BO07322.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2263-RA 668..1610 11..951 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:20:05 Download gff for BO07322.3prime
Subject Subject Range Query Range Percent Splice Strand
X 8143993..8144935 11..951 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:08:51 Download gff for BO07322.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8038026..8038968 11..951 99   Plus

BO07322.5prime Sequence

966 bp (897 high quality bases) assembled on 2005-12-04

> BO07322.5prime
GAAGTTATCAGTCGACATGCATCCCGATCTCACGGAGCGCATTCTCCAGC
ATTTGGAGACCACCGACAAGGCGGACACACTGGACCTGGCCGCACTCTTT
GCCGAGGATCACCAGAAGATTGTGGGCTCATTGAAGAGCATACAGGCGCA
TGGCGAACTAGTCACCGCGGAAACGGTCACCCACAAGAGTTTGGGCCTCA
CAGACGAGGGTCGCGCCGTCGTGGAGAATGGCAGTCATGAGGCACTGGTC
TACGACCTAGTTCCGCCGGAGGGAATCGCCCAGGCGGCTCTAATGGCAGC
CGGTGGCGCAAATGCCAAAGTGGGCTTTAGCAAAGCCATGTCGCACGGCT
GGATTTTGGTGGACAAGAGCGTCACGCCGCCGCTGGTGCGCCGCAAGGTG
GACACCATTACGGATGTGGTGCGCAATCAACTGCAGCAGGTGGCGCTGGG
AAAGGGTGACCAGCTGCCTGCCAAGGAGGTGGCCGACTTCAAGAAACGCA
AGCTCCTCCAGGAAACGACCACCAAGAGCTTCGTGCTGGCACGCGGCCCT
GAATTTGCCACCACTCTCACCAAGTTGGAGACGGATCTCACGGTGGAAAT
GCTCGCAAATGGATTGTGGGACCAGCTCAAGTTCAAGGCCTATAACTTTG
ATGCGTTGGGTGCACCACCAACGCGTGGACATCTCCATCCCTTGCTCAAA
GTGCGCACTGAGTTCCGGCAGATATTCCTCGAGATGGGCTTCTCAGAGAT
GCCTACGAACAACTATGTGGAATCGTCATTCTGGAACTTCGATGCGCTCT
ATCAGCCGCAACAGCATCCAGCTCGCGATGCCCACGACACCTTCTTCGTG
AATCATCCGGCCAAAAGCCACAAGTTTCCGCAGGACTATCTGGAGCGCGT
GAAGAAGGTGCACTCTGTGGGTGGCTATGGATCCGAGGGGTACGGCTACG
ACTGGAAGCTGGAGGA

BO07322.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:00:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG2263-PA 1497 CG2263-RA 1..950 17..966 4675 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:29:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG2263-RA 1699 CG2263-RA 108..1057 17..966 4705 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:29:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8144546..8145495 966..17 4705 99.7 Minus
Blast to na_te.dros performed on 2015-02-10 17:29:54 has no hits.

BO07322.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:15:25 Download gff for BO07322.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2263-PA 1..949 17..965 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:56:27 Download gff for BO07322.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2263-PA 1..949 17..965 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:05:56 Download gff for BO07322.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2263-RA 103..1056 9..965 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:46:19 Download gff for BO07322.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2263-RA 103..1056 9..965 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:46:19 Download gff for BO07322.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8144547..8145500 9..965 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:05:56 Download gff for BO07322.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8038580..8039533 9..965 99   Minus

BO07322.complete Sequence

1528 bp (1528 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630750

> BO07322.complete
GAAGTTATCAGTCGACATGCATCCCGATCTCACGGAGCGCATTCTCCAGC
ATTTGGAGACCACCGACAAGGCGGACACACTGGACCTGGCCGCACTCTTT
GCCGAGGATCACCAGAAGATTGTGGGCTCATTGAAGAGCATACAGGCGCA
TGGCGAACTAGTCACCGCGGAAACGGTCACCCACAAGAGTTTGGGCCTCA
CAGACGAGGGTCGCGCCGTCGTGGAGAATGGCAGTCATGAGGCACTGGTC
TACGACCTAGTTCCGCCGGAGGGAATCGCCCAGGCGGCTCTAATGGCAGC
CGGTGGCGCAAATGCCAAAGTGGGCTTTAGCAAAGCCATGTCGCACGGCT
GGATTTTGGTGGACAAGAGCGTCACGCCGCCGCTGGTGCGCCGCAAGGTG
GACACCATTACGGATGTGGTGCGCAATCAACTGCAGCAGGTGGCGCTGGG
AAAGGGTGACCAGCTGCCTGCCAAGGAGGTGGCCGACTTCAAGAAACGCA
AGCTCCTCCAGGAAACGACCACCAAGAGCTTCGTGCTGGCACGCGGCCCT
GAATTTGCCACCACTCTCACCAAGTTGGAGACGGATCTCACGGTGGAAAT
GCTCGCAAATGGATTGTGGGACCAGCTCAAGTTCAAGGCCTATAACTTTG
ATGCGTTGGGTGCACCACCAACGCGTGGACATCTCCATCCCTTGCTCAAA
GTGCGCACTGAGTTCCGGCAGATATTCCTCGAGATGGGCTTCTCAGAGAT
GCCTACGAACAACTATGTGGAATCGTCATTCTGGAACTTCGATGCGCTCT
ATCAGCCGCAACAGCATCCAGCTCGCGATGCCCACGACACCTTCTTCGTG
AATCATCCGGCCAAAAGCCACAAGTTTCCGCAGGACTATCTGGAGCGCGT
GAAGAAGGTGCACTCTGTGGGTGGCTATGGATCGAAGGGTTACGGCTACG
ACTGGAAGCTGGAGGAGGCGCAGAAGAATCTACTGCGCACGCATACGACG
GCCGTGAGTGCGAGGATGCTGTACAAGCTGGCCAACCAGGAGGGCGGCTT
CAAAGCAGCCAAGTACTTCAGCATCGACAAGGTGTTCCGCAACGAAACAC
TGGACGCCACACATCTGGCGGAGTTCCATCAGGTGGAGGGCGTGATTGCA
GATGTTGGTCTGACGCTGGGCGATCTCATTGGCACGCTGTACGAGTTCTT
CAGAAAGCTGGGCATCACGCAGCTTGAATTCAAGCCGGCGTACAATCCGT
ACACCGAGCCCAGCATGGAGATCTTCTGCTATCACCCCGGCCTGGCCAAG
TGGATCGAGGTGGGCAACTCGGGCGTCTTCCGGCCGGAGATGCTGCTGCC
CATGGGACTGCCGGAGAACGTGAATGTAATCGCCTGGGGTCTGTCGCTGG
AGCGACCCACCATGATCAAGTACGGCATCAACAACATTCGCGATTTGGTC
GGACCCAAAGTGGATCTAAAGATGGTGGAGGAGGGCCCCATCTGCCGGCT
GGATCATGCTGCAAGCTTTCTAGACCAT

BO07322.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:48:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG2263-RA 1497 CG2263-PA 1..1494 17..1510 7470 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:48:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG2263-RA 1699 CG2263-RA 108..1601 17..1510 7470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8144002..8145495 1510..17 7470 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:48:20 has no hits.

BO07322.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:16:59 Download gff for BO07322.complete
Subject Subject Range Query Range Percent Splice Strand
CG2263-RA 1..1497 17..1514 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:39:02 Download gff for BO07322.complete
Subject Subject Range Query Range Percent Splice Strand
CG2263-RA 102..1609 9..1518 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:31:51 Download gff for BO07322.complete
Subject Subject Range Query Range Percent Splice Strand
CG2263-RA 108..1601 17..1512 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:17:00 Download gff for BO07322.complete
Subject Subject Range Query Range Percent Splice Strand
CG2263-RA 102..1609 9..1518 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:17 Download gff for BO07322.complete
Subject Subject Range Query Range Percent Splice Strand
CG2263-RA 108..1601 17..1512 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:17 Download gff for BO07322.complete
Subject Subject Range Query Range Percent Splice Strand
X 8144000..8145495 17..1512 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:31:51 Download gff for BO07322.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8038033..8039528 17..1512 99   Minus

BO07322.pep Sequence

Translation from 16 to 1528

> BO07322.pep
MHPDLTERILQHLETTDKADTLDLAALFAEDHQKIVGSLKSIQAHGELVT
AETVTHKSLGLTDEGRAVVENGSHEALVYDLVPPEGIAQAALMAAGGANA
KVGFSKAMSHGWILVDKSVTPPLVRRKVDTITDVVRNQLQQVALGKGDQL
PAKEVADFKKRKLLQETTTKSFVLARGPEFATTLTKLETDLTVEMLANGL
WDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEMPTNNY
VESSFWNFDALYQPQQHPARDAHDTFFVNHPAKSHKFPQDYLERVKKVHS
VGGYGSKGYGYDWKLEEAQKNLLRTHTTAVSARMLYKLANQEGGFKAAKY
FSIDKVFRNETLDATHLAEFHQVEGVIADVGLTLGDLIGTLYEFFRKLGI
TQLEFKPAYNPYTEPSMEIFCYHPGLAKWIEVGNSGVFRPEMLLPMGLPE
NVNVIAWGLSLERPTMIKYGINNIRDLVGPKVDLKMVEEGPICRLDHAAS
FLDH

BO07322.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG2263-PA 498 CG2263-PA 1..498 1..498 2606 100 Plus