Clone Sequence Records
BO07322.3prime Sequence
951 bp (876 high quality bases) assembled on 2005-12-04
> BO07322.3prime
ATGGTCTAGAAAGCTTGCAGCATGATCCAGCCGGCAGATGGGGCCCTCCT
CCACCATCTTTAGATCCACTTTGGGTCCGACCAAATCGCGAATGTTGTTG
ATGCCGTACTTGATCATGGTGGGTCGCTCCAGCGACAGACCCCAGGCGAT
TACATTCACGTTCTCCGGCAGTCCCATGGGCAGCAGCATCTCCGGCCGGA
AGACGCCCGAGTTGCCCACCTCGATCCACTTGGCCAGGCCGGGGTGATAG
CAGAAGATCTCCATGCTGGGCTCGGTGTACGGATTGTACGCCGGCTTGAA
TTCAAGCTGCGTGATGCCCAGCTTTCTGAAGAACTCGTACAGCGTGCCAA
TGAGATCGCCCAGCGTCAGACCAACATCTGCAATCACGCCCTCCACCTGA
TGGAACTCCGCCAGATGTGTGGCGTCCAGTGTTTCGTTGCGGAACACCTT
GTCGATGCTGAAGTACTTGGCTGCTTTGAAGCCGCCCTCCTGGTTGGCCA
GCTTGTACAGCATCCTCGCACTCACGGCCGTCGTATGCGTGCGCAGTAGA
TTCTTCTGCGCCTCCTCCAGCTTCCAGTCGTAGCCGTAACCCTTCGATCC
ATAGCCACCCACAGAGTGCACCTTCTTCACGCGCTCCAGATAGTCCTGCG
GAAACTTGTGGCTTTTGGCCGGATGATTCACGAAGAAGGTGTCGTGGGCA
TCGCGAGCTGGATGCTGTTGCGGCTGATAGAGCGCATCGAAGTTCCAGAA
TGACGATTCCACATAGTTGTTCGTAGGCATCTCTGAGAAGCCCATCTCGA
GGAATATCTGCCGGAACTCAGTGCGCACTTTGAGCAAGGGATGGAGATGT
CCACGCGTTGGTGGTGCACCCAACGCATCAAAGTTATAGGCCTTGAACTT
GAGCTGGTCCACAATCCATTTGCGAGCATTTCCACCGTGAGATCCGTCTC
C
BO07322.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:00:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2263-PA | 1497 | CG2263-RA | 603..1494 | 910..19 | 4460 | 100 | Minus |
CG2263-PA | 1497 | CG2263-RA | 561..603 | 951..909 | 215 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:32:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2263-RA | 1699 | CG2263-RA | 668..1601 | 951..19 | 4645 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:32:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8144002..8144935 | 19..951 | 4620 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:32:45 has no hits.
BO07322.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:15:24 Download gff for
BO07322.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-PA | 561..1497 | 15..951 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:56:26 Download gff for
BO07322.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-PA | 561..1497 | 15..951 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:08:51 Download gff for
BO07322.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-RA | 668..1610 | 11..951 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:20:05 Download gff for
BO07322.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-RA | 668..1610 | 11..951 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:20:05 Download gff for
BO07322.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8143993..8144935 | 11..951 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:08:51 Download gff for
BO07322.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8038026..8038968 | 11..951 | 99 | | Plus |
BO07322.5prime Sequence
966 bp (897 high quality bases) assembled on 2005-12-04
> BO07322.5prime
GAAGTTATCAGTCGACATGCATCCCGATCTCACGGAGCGCATTCTCCAGC
ATTTGGAGACCACCGACAAGGCGGACACACTGGACCTGGCCGCACTCTTT
GCCGAGGATCACCAGAAGATTGTGGGCTCATTGAAGAGCATACAGGCGCA
TGGCGAACTAGTCACCGCGGAAACGGTCACCCACAAGAGTTTGGGCCTCA
CAGACGAGGGTCGCGCCGTCGTGGAGAATGGCAGTCATGAGGCACTGGTC
TACGACCTAGTTCCGCCGGAGGGAATCGCCCAGGCGGCTCTAATGGCAGC
CGGTGGCGCAAATGCCAAAGTGGGCTTTAGCAAAGCCATGTCGCACGGCT
GGATTTTGGTGGACAAGAGCGTCACGCCGCCGCTGGTGCGCCGCAAGGTG
GACACCATTACGGATGTGGTGCGCAATCAACTGCAGCAGGTGGCGCTGGG
AAAGGGTGACCAGCTGCCTGCCAAGGAGGTGGCCGACTTCAAGAAACGCA
AGCTCCTCCAGGAAACGACCACCAAGAGCTTCGTGCTGGCACGCGGCCCT
GAATTTGCCACCACTCTCACCAAGTTGGAGACGGATCTCACGGTGGAAAT
GCTCGCAAATGGATTGTGGGACCAGCTCAAGTTCAAGGCCTATAACTTTG
ATGCGTTGGGTGCACCACCAACGCGTGGACATCTCCATCCCTTGCTCAAA
GTGCGCACTGAGTTCCGGCAGATATTCCTCGAGATGGGCTTCTCAGAGAT
GCCTACGAACAACTATGTGGAATCGTCATTCTGGAACTTCGATGCGCTCT
ATCAGCCGCAACAGCATCCAGCTCGCGATGCCCACGACACCTTCTTCGTG
AATCATCCGGCCAAAAGCCACAAGTTTCCGCAGGACTATCTGGAGCGCGT
GAAGAAGGTGCACTCTGTGGGTGGCTATGGATCCGAGGGGTACGGCTACG
ACTGGAAGCTGGAGGA
BO07322.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:00:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2263-PA | 1497 | CG2263-RA | 1..950 | 17..966 | 4675 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:29:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2263-RA | 1699 | CG2263-RA | 108..1057 | 17..966 | 4705 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:29:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8144546..8145495 | 966..17 | 4705 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:29:54 has no hits.
BO07322.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:15:25 Download gff for
BO07322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-PA | 1..949 | 17..965 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:56:27 Download gff for
BO07322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-PA | 1..949 | 17..965 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:05:56 Download gff for
BO07322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-RA | 103..1056 | 9..965 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:46:19 Download gff for
BO07322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-RA | 103..1056 | 9..965 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:46:19 Download gff for
BO07322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8144547..8145500 | 9..965 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:05:56 Download gff for
BO07322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8038580..8039533 | 9..965 | 99 | | Minus |
BO07322.complete Sequence
1528 bp (1528 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630750
> BO07322.complete
GAAGTTATCAGTCGACATGCATCCCGATCTCACGGAGCGCATTCTCCAGC
ATTTGGAGACCACCGACAAGGCGGACACACTGGACCTGGCCGCACTCTTT
GCCGAGGATCACCAGAAGATTGTGGGCTCATTGAAGAGCATACAGGCGCA
TGGCGAACTAGTCACCGCGGAAACGGTCACCCACAAGAGTTTGGGCCTCA
CAGACGAGGGTCGCGCCGTCGTGGAGAATGGCAGTCATGAGGCACTGGTC
TACGACCTAGTTCCGCCGGAGGGAATCGCCCAGGCGGCTCTAATGGCAGC
CGGTGGCGCAAATGCCAAAGTGGGCTTTAGCAAAGCCATGTCGCACGGCT
GGATTTTGGTGGACAAGAGCGTCACGCCGCCGCTGGTGCGCCGCAAGGTG
GACACCATTACGGATGTGGTGCGCAATCAACTGCAGCAGGTGGCGCTGGG
AAAGGGTGACCAGCTGCCTGCCAAGGAGGTGGCCGACTTCAAGAAACGCA
AGCTCCTCCAGGAAACGACCACCAAGAGCTTCGTGCTGGCACGCGGCCCT
GAATTTGCCACCACTCTCACCAAGTTGGAGACGGATCTCACGGTGGAAAT
GCTCGCAAATGGATTGTGGGACCAGCTCAAGTTCAAGGCCTATAACTTTG
ATGCGTTGGGTGCACCACCAACGCGTGGACATCTCCATCCCTTGCTCAAA
GTGCGCACTGAGTTCCGGCAGATATTCCTCGAGATGGGCTTCTCAGAGAT
GCCTACGAACAACTATGTGGAATCGTCATTCTGGAACTTCGATGCGCTCT
ATCAGCCGCAACAGCATCCAGCTCGCGATGCCCACGACACCTTCTTCGTG
AATCATCCGGCCAAAAGCCACAAGTTTCCGCAGGACTATCTGGAGCGCGT
GAAGAAGGTGCACTCTGTGGGTGGCTATGGATCGAAGGGTTACGGCTACG
ACTGGAAGCTGGAGGAGGCGCAGAAGAATCTACTGCGCACGCATACGACG
GCCGTGAGTGCGAGGATGCTGTACAAGCTGGCCAACCAGGAGGGCGGCTT
CAAAGCAGCCAAGTACTTCAGCATCGACAAGGTGTTCCGCAACGAAACAC
TGGACGCCACACATCTGGCGGAGTTCCATCAGGTGGAGGGCGTGATTGCA
GATGTTGGTCTGACGCTGGGCGATCTCATTGGCACGCTGTACGAGTTCTT
CAGAAAGCTGGGCATCACGCAGCTTGAATTCAAGCCGGCGTACAATCCGT
ACACCGAGCCCAGCATGGAGATCTTCTGCTATCACCCCGGCCTGGCCAAG
TGGATCGAGGTGGGCAACTCGGGCGTCTTCCGGCCGGAGATGCTGCTGCC
CATGGGACTGCCGGAGAACGTGAATGTAATCGCCTGGGGTCTGTCGCTGG
AGCGACCCACCATGATCAAGTACGGCATCAACAACATTCGCGATTTGGTC
GGACCCAAAGTGGATCTAAAGATGGTGGAGGAGGGCCCCATCTGCCGGCT
GGATCATGCTGCAAGCTTTCTAGACCAT
BO07322.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:48:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2263-RA | 1497 | CG2263-PA | 1..1494 | 17..1510 | 7470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:48:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2263-RA | 1699 | CG2263-RA | 108..1601 | 17..1510 | 7470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:48:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8144002..8145495 | 1510..17 | 7470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:48:20 has no hits.
BO07322.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:16:59 Download gff for
BO07322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-RA | 1..1497 | 17..1514 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:39:02 Download gff for
BO07322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-RA | 102..1609 | 9..1518 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:31:51 Download gff for
BO07322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-RA | 108..1601 | 17..1512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:17:00 Download gff for
BO07322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-RA | 102..1609 | 9..1518 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:17 Download gff for
BO07322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2263-RA | 108..1601 | 17..1512 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:17 Download gff for
BO07322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8144000..8145495 | 17..1512 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:31:51 Download gff for
BO07322.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8038033..8039528 | 17..1512 | 99 | | Minus |
BO07322.pep Sequence
Translation from 16 to 1528
> BO07322.pep
MHPDLTERILQHLETTDKADTLDLAALFAEDHQKIVGSLKSIQAHGELVT
AETVTHKSLGLTDEGRAVVENGSHEALVYDLVPPEGIAQAALMAAGGANA
KVGFSKAMSHGWILVDKSVTPPLVRRKVDTITDVVRNQLQQVALGKGDQL
PAKEVADFKKRKLLQETTTKSFVLARGPEFATTLTKLETDLTVEMLANGL
WDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEMPTNNY
VESSFWNFDALYQPQQHPARDAHDTFFVNHPAKSHKFPQDYLERVKKVHS
VGGYGSKGYGYDWKLEEAQKNLLRTHTTAVSARMLYKLANQEGGFKAAKY
FSIDKVFRNETLDATHLAEFHQVEGVIADVGLTLGDLIGTLYEFFRKLGI
TQLEFKPAYNPYTEPSMEIFCYHPGLAKWIEVGNSGVFRPEMLLPMGLPE
NVNVIAWGLSLERPTMIKYGINNIRDLVGPKVDLKMVEEGPICRLDHAAS
FLDH
BO07322.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:45:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2263-PA | 498 | CG2263-PA | 1..498 | 1..498 | 2606 | 100 | Plus |