Clone BO07324 Report

Search the DGRC for BO07324

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:73
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG5027-RA
Protein status:BO07324.pep: validated full length
Sequenced Size:1324

Clone Sequence Records

BO07324.3prime Sequence

914 bp (852 high quality bases) assembled on 2005-12-04

> BO07324.3prime
ATGGTCTAGAAAGCTTGCCTCCTTCTTCTCGTGATCTTCATCGGGATCTT
CTTCTGTGACCAAGCAATCGCCGCAGAAAATAGAGTACATGATGAGCGAT
AAGAATCCCAATGGCAGGCCGAAGATGACAGTGGTCAGCACGGGATTTCC
CAGCCACATATCCCTTAATGCTCTTCGCACTTCGAACAGTGCCCGATTCA
AACGTACAAAGTACGTATCTCCTCCATAGGCAATGGCACTTTCGTTGCGG
ATGGATTCTAGGAAAAGGTGCAGTGCCTGTGGAGTCATTTGCATTGGATC
ATCTTCGGGTATGAAGTGGTGTTGGGTGCTCGAATTAATCGCTATCAAGT
GAGGCGTGGGCAGTTGATCCAAGATAATGGAATGTGCTATTGATGGCTCG
CCAATCCATCCAAATTGGAATTTGTCATGATATCGCGCCCTATGCTTTCT
TATCACGCCCTCCACCATGTCCCGAAACTCCAGCTCATGCGTGGCTATCT
GATTGAGCTTATCCTCCTGTACCACAGCCAAAACCAAGTACTTGTTTGTC
TTGAGCAGCTGGTGGATGTTGAACCGAGTGACCTTTGGGAAGAGTGTGAA
CCTCTCCACGTTCACCCATTGGAAAACGGTTTCGTTCACTTCATTGGGGT
CCATTTCGTGCGCCAAATGCCCATGCGGATAGAAGTGGTGCTGCTCTTCT
TTGTAGACAATCACCGCTGGCAGTTTCTCAAAGTCAAAGTGTTGGGCAGC
GATATCCTCGCTGGTGGCATAGAAAAATCCATGCTCTTGGTAACCTTCAG
CTGCAGCATAGTATGTATCCCACACCACGCCCTCCTGTTGGCCTACGAAA
ATGAAAATATCGTATGGGATCCCTTTAGCATGTCCACACTCTCCGTTCGC
GTGACCAGCTGAAC

BO07324.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:00:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG5027-PA 1293 CG5027-RA 452..1290 857..19 4195 100 Minus
CG5027-PA 1293 CG5027-RA 394..454 914..854 305 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG5027-RA 1862 CG5027-RA 595..1491 914..19 4460 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16229815..16230324 914..406 2500 99.8 Minus
3L 28110227 3L 16230381..16230768 406..19 1940 100 Minus
Blast to na_te.dros performed on 2015-02-11 05:12:19 has no hits.

BO07324.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:15:28 Download gff for BO07324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5027-PA 394..1293 15..914 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:56:32 Download gff for BO07324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5027-PA 394..1293 15..914 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:52 Download gff for BO07324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5027-RA 595..1496 14..914 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:38:58 Download gff for BO07324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5027-RA 595..1496 14..914 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:38:58 Download gff for BO07324.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 16229815..16230324 406..914 99 -> Minus
3L 16230382..16230773 14..405 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:52 Download gff for BO07324.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16222915..16223424 406..914 99 -> Minus
arm_3L 16223482..16223873 14..405 99   Minus

BO07324.5prime Sequence

858 bp (848 high quality bases) assembled on 2005-12-04

> BO07324.5prime
GAAGTTATCAGTCGACATGTCGCCAAATTCTATGTGGATTTTCGGCCTCA
TAAGTGCTCTGCTTCTGACTCTGGGTTCGACGGGGCTATCCTCGAAGGTT
TTGGAGCTCAGTGACCGGTTCATCGATGTGCGACACGAGGGCCAATGGTT
GGTCATGTTCTATGCCCCGTGGTGCGGCTACTGCAAGAAAACGGAGCCCA
TTTTTGCTCTGGTGGCTCAGGCTTTGCATGCCACCAACGTTCGAGTGGGT
CGCCTAGATTGTACCAAGTATCCGGCGGCGGCGAAGGAGTTCAAGGTTCG
TGGCTATCCCACCATTATGTTCATCAAGGGCAACATGGAGTTCACCTACA
ACGGAGACCGCGGTCGCGATGAGCTGGTGGATTATGCCTTAAGGATGTCT
GGGCCTCCAGTTCAGCTGGTCACGCGAACGGAGAGTGTGGACATGCTAAA
GGGATCCCATACGATATTTTTCATTTTCGTAGGCCAACAGGAGGGCGTGG
TGTGGGATACATACTATGCTGCAGCTGAAGGTTACCAAGAGCATGGATTT
TTCTATGCCACCAGCGAGGATATCGCTGCCCAACACTTTGACTTTGAGAA
ACTGCCAGCGGTGATTGTCTACAAAGAAGAGCAGCACCACTTCTATCCGC
ATGGGCATTTGGCGCACGAAATGGACCCCAATGAAGTGAACGAAACCGTT
TTCCAATGGGTGAACGTGGAGAGGTTCACACTCTTCCCAAAGGTCACTCG
GTTCAACATCCACCAGCTGCTCAAGACAAACAAGTACTTGGTTTTGGCTG
TGGTACAGGAGGATAAGCTCAATCAGATAGCCACGCATGAGCTGGAGTTT
CGGGACAT

BO07324.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:00:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG5027-PA 1293 CG5027-RA 1..842 17..858 4210 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG5027-RA 1862 CG5027-RA 202..1043 17..858 4210 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:12:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16229699..16230263 294..858 2825 100 Plus
3L 28110227 3L 16229404..16229645 56..297 1210 100 Plus
3L 28110227 3L 16229301..16229340 17..56 200 100 Plus
Blast to na_te.dros performed on 2015-02-11 05:12:23 has no hits.

BO07324.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:15:29 Download gff for BO07324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5027-PA 1..842 17..858 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:56:33 Download gff for BO07324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5027-PA 1..842 17..858 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:21:54 Download gff for BO07324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5027-RA 199..1043 10..858 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:39:15 Download gff for BO07324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5027-RA 199..1043 10..858 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:39:15 Download gff for BO07324.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16229298..16229340 10..56 91 -> Plus
3L 16229405..16229643 57..295 100 -> Plus
3L 16229701..16230263 296..858 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:21:54 Download gff for BO07324.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16222398..16222440 10..56 91 -> Plus
arm_3L 16222505..16222743 57..295 100 -> Plus
arm_3L 16222801..16223363 296..858 100   Plus

BO07324.complete Sequence

1324 bp (1324 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630751

> BO07324.complete
GAAGTTATCAGTCGACATGTCGCCAAATTCTATGTGGATTTTCGGCCTCA
TAAGTGCTCTGCTTCTGACTCTGGGTTCGACGGGGCTATCCTCGAAGGTT
TTGGAGCTCAGTGACCGGTTCATCGATGTGCGACACGAGGGCCAATGGTT
GGTCATGTTCTATGCCCCGTGGTGCGGCTACTGCAAGAAAACGGAGCCCA
TTTTTGCTCTGGTGGCTCAGGCTTTGCATGCCACCAACGTTCGAGTGGGT
CGCCTAGATTGTACCAAGTATCCGGCGGCGGCGAAGGAGTTCAAGGTTCG
TGGCTATCCCACCATTATGTTCATCAAGGGCAACATGGAGTTCACCTACA
ACGGAGACCGCGGTCGCGATGAGCTGGTGGATTATGCCTTAAGGATGTCT
GGGCCTCCAGTTCAGCTGGTCACGCGAACGGAGAGTGTGGACATGCTAAA
GGGATCCCATACGATATTTTTCATTTTCGTAGGCCAACAGGAGGGCGTGG
TGTGGGATACATACTATGCTGCAGCTGAAGGTTACCAAGAGCATGGATTT
TTCTATGCCACCAGCGAGGATATCGCTGCCCAACACTTTGACTTTGAGAA
ACTGCCAGCGGTGATTGTCTACAAAGAAGAGCAGCACCACTTCTATCCGC
ATGGGCATTTGGCGCACGAAATGGACCCCAATGAAGTGAACGAAACCGTT
TTCCAATGGGTGAACGTGGAGAGGTTCACACTCTTCCCAAAGGTCACTCG
GTTCAACATCCACCAGCTGCTCAAGACAAACAAGTACTTGGTTTTGGCTG
TGGTACAGGAGGATAAGCTCAATCAGATAGCCACGCATGAGCTGGAGTTT
CGGGACATGGTGGAGGGCGTGATAAGAAAGCATAGGGCGCGATATCATGA
CAAATTCCAATTTGGATGGATTGGCGAGCCATCAATAGCACATTCCATTA
TCTTGGATCAACTGCCCACGCCTCACTTGATAGCGATTAATTCGAGCACC
CAACACCACTTCATACCCGAAGATGATCCAATGCAAATGACTCCACAGGC
ACTGCACCTTTTCCTAGAATCCATCCGCAACGAAAGTGCCATTGCCTATG
GAGGAGATACGTACTTTGTACGTTTGAATCGGGCACTGTTCGAAGTGCGA
AGAGCATTAAGGGATATGTGGCTGGGAAATCCCGTGCTGACCACTGTCAT
CTTCGGCCTGCCATTGGGATTCTTATCGCTCATCATGTACTCTATTTTCT
GCGGCGATTGCTTGGTCACAGAAGAAGATCCCGATGAAGATCACGAGAAG
AAGGAGGCAAGCTTTCTAGACCAT

BO07324.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG5027-RA 1293 CG5027-PA 1..1290 17..1306 6450 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:57:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG5027-RA 1862 CG5027-RA 202..1491 17..1306 6450 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16229699..16230324 294..919 3130 100 Plus
3L 28110227 3L 16230381..16230768 919..1306 1940 100 Plus
3L 28110227 3L 16229404..16229645 56..297 1210 100 Plus
3L 28110227 3L 16229301..16229340 17..56 200 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:57:22 has no hits.

BO07324.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:17:01 Download gff for BO07324.complete
Subject Subject Range Query Range Percent Splice Strand
CG5027-RA 1..1293 17..1310 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:39:04 Download gff for BO07324.complete
Subject Subject Range Query Range Percent Splice Strand
CG5027-RA 193..1490 10..1311 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:35:16 Download gff for BO07324.complete
Subject Subject Range Query Range Percent Splice Strand
CG5027-RA 202..1491 17..1308 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:17:01 Download gff for BO07324.complete
Subject Subject Range Query Range Percent Splice Strand
CG5027-RA 193..1490 10..1311 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:56:39 Download gff for BO07324.complete
Subject Subject Range Query Range Percent Splice Strand
CG5027-RA 202..1491 17..1308 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:39 Download gff for BO07324.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16229301..16229340 17..56 100 -> Plus
3L 16229405..16229643 57..295 100 -> Plus
3L 16229701..16230324 296..919 100 -> Plus
3L 16230382..16230768 920..1308 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:35:16 Download gff for BO07324.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16222401..16222440 17..56 100 -> Plus
arm_3L 16222505..16222743 57..295 100 -> Plus
arm_3L 16222801..16223424 296..919 100 -> Plus
arm_3L 16223482..16223868 920..1308 99   Plus

BO07324.pep Sequence

Translation from 16 to 1324

> BO07324.pep
MSPNSMWIFGLISALLLTLGSTGLSSKVLELSDRFIDVRHEGQWLVMFYA
PWCGYCKKTEPIFALVAQALHATNVRVGRLDCTKYPAAAKEFKVRGYPTI
MFIKGNMEFTYNGDRGRDELVDYALRMSGPPVQLVTRTESVDMLKGSHTI
FFIFVGQQEGVVWDTYYAAAEGYQEHGFFYATSEDIAAQHFDFEKLPAVI
VYKEEQHHFYPHGHLAHEMDPNEVNETVFQWVNVERFTLFPKVTRFNIHQ
LLKTNKYLVLAVVQEDKLNQIATHELEFRDMVEGVIRKHRARYHDKFQFG
WIGEPSIAHSIILDQLPTPHLIAINSSTQHHFIPEDDPMQMTPQALHLFL
ESIRNESAIAYGGDTYFVRLNRALFEVRRALRDMWLGNPVLTTVIFGLPL
GFLSLIMYSIFCGDCLVTEEDPDEDHEKKEASFLDH

BO07324.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:45:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG5027-PA 430 CG5027-PA 1..430 1..430 2294 100 Plus
Pdi-PE 496 CG6988-PE 48..196 45..190 191 28.2 Plus
Pdi-PA 496 CG6988-PA 48..196 45..190 191 28.2 Plus
CG9302-PA 510 CG9302-PA 395..509 25..139 182 38.7 Plus
CaBP1-PB 433 CG5809-PB 148..261 20..124 177 37.4 Plus
CG9302-PA 510 CG9302-PA 266..380 21..131 163 32.8 Plus