Clone Sequence Records
BO07325.3prime Sequence
836 bp (784 high quality bases) assembled on 2005-12-04
> BO07325.3prime
ATGGTCTAGAAAGCTTGCCTGCTGCTGCTGGCCGGCGTAGGCCAATTGCT
GGGCATCGGACCCATCCTCGCTGATGCTGCGGGCATAGGGATAGGACGAG
GAGGCTCCCGAGCTCCAGCCGGCGCTGGCGGGTGCGGACCATGCGTTCGA
GTTGTAGGCTCCGGCAAAGGAGTTACCTCCGAACTTGTTGCCGAATCCGC
CCAGCAGGCGGGATCCGCCGACCAGAATGGCCAGGAAGAAGGCCAGCTTG
GCCACGATCACGGCCTTGAAGGTCAGCAGGGCCAGAAACCCGAGCACCAG
GGGAATGACGGCGAACAGCTTGGCGCCAATGGCCAGAGCCACGGGTCCCA
GCATCTTCTTGATCTTGCCACGGCCTTCATCGAGGGCACGAGCCACCTGC
TGGGTGGTCTCGGCGGGCAGCTTGAACTCCAGGTTGTGGGTGCTTAGGAA
GTCGGCGGCACTAGAGACGGCCAGATCCACTAGACGACCAGTACGCTCAT
CGGCATTCTGGGGCAGCTCGGCATAGACATCCTGCTCGCTCATCGATTTT
CCCGTGCGGGAAACGGGACTGGCGGGATCCCTCTGGAAGGTGACTCCACT
GGCCAGCTCGATGTTGTTGCTCCTGGCGGCGCGGTTGAGTGCGGTGATGC
CCTTGACGGCCAGGCAGGTGGCCATGTCGTCGCTCTCCAGACAGGCGCCC
AGATACCGGGCGGCCCGGCCCAGGGTATTGTCGCCCTCGACCTGGTTGTC
TTGAACACTGGGCGCGGCAAAGACGCAGCTGGCCGCCAAGAGGGTCACAC
AAGCGATGGCAAACACTTTCATGTCGACTGATAACT
BO07325.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:00:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1155-PA | 807 | Osi14-RA | 1..804 | 822..19 | 4020 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:36:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-RA | 1091 | CG1155-RA | 124..927 | 822..19 | 4020 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:36:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6300217..6300574 | 376..19 | 1790 | 100 | Minus |
3R | 32079331 | 3R | 6299251..6299493 | 822..580 | 1215 | 100 | Minus |
3R | 32079331 | 3R | 6299957..6300165 | 582..374 | 1045 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 03:36:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G5A | 2841 | G5A G5A 2841bp | 60..116 | 480..536 | 123 | 68.4 | Plus |
BO07325.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:15:30 Download gff for
BO07325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-PA | 1..807 | 18..822 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:56:34 Download gff for
BO07325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1155-PA | 1..807 | 18..822 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:55:26 Download gff for
BO07325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 113..934 | 13..832 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:52:17 Download gff for
BO07325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 113..934 | 13..832 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:52:17 Download gff for
BO07325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6299240..6299492 | 581..832 | 98 | -> | Minus |
3R | 6299959..6300164 | 375..580 | 100 | -> | Minus |
3R | 6300219..6300581 | 13..374 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:55:26 Download gff for
BO07325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2124962..2125214 | 581..832 | 98 | -> | Minus |
arm_3R | 2125681..2125886 | 375..580 | 100 | -> | Minus |
arm_3R | 2125941..2126303 | 13..374 | 99 | | Minus |
BO07325.5prime Sequence
836 bp (800 high quality bases) assembled on 2005-12-04
> BO07325.5prime
GAAGTTATCAGTCGACATGAAAGTGTTTGCCATCGCTTGTGTGACCCTCT
TGGCGGCCAGCTGCGTCTTTGCCGCGCCCAGTGTTCAAGACAACCAGGTC
GAGGGCGACAATACCCTGGGCCGGGCCGCCCGGTATCTGGGCGCCTGTCT
GGAGAGCGACGACATGGCCACCTGCCTGGCCGTCAAGGGCATCACCGCAC
TCAACCGCGCCGCCAGGAGCAACAACATCGAGCTGGCCAGTGGAGTCACC
TTCCAGAGGGATCCCGCCAGTCCCGTTTCCCGCACGGGAAAATCGATGAG
CGAGCAGGATGTCTATGCCGAGCTGCCCCAGAATGCCGATGAGCGTACTG
GTCGTCTAGTGGATCTGGCCGTCTCTAGTGCCGCCGACTTCCTAAGCACC
CACAACCTGGAGTTCAAGCTGCCCGCCGAGACCACCCAGCAGGTGGCTCG
TGCCCTCGATGAAGGCCGTGGCAAGATCAAGAAGATGCTGGGACCCGTGG
CTCTGGCCATTGGCGCCAAGCTGTTCGCCGTCATTCCCCTGGTGCTCGGG
TTTCTGGCCCTGCTGACCTTCAAGGCCGTGATCGTGGCCAAGCTGGCCTT
CTTCCTGGCCATTCTGGTCGGCGGATCCCGCCTGCTGGGCGGATTCGGCA
ACAAGTTCGGAGGTAACTCCTTTGCCGGAGCCTACAACTCGAACGCATGG
TCCGCACCCGCCAGCGCCGGCTGGAGCTCGGGAGCCTCCTCGTCCTATCC
CTATGCCCGCAGCATCAGCGAGGATGGGTCCGATGCCCAGCAATTGGCCT
ACGCCGGCCAGCAGCAGCAGGCAAGCTTTCTAGACC
BO07325.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:00:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1155-PA | 807 | Osi14-RA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:14:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-RA | 1091 | CG1155-RA | 124..927 | 17..820 | 4020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:14:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6300217..6300574 | 463..820 | 1790 | 100 | Plus |
3R | 32079331 | 3R | 6299251..6299493 | 17..259 | 1215 | 100 | Plus |
3R | 32079331 | 3R | 6299957..6300165 | 257..465 | 1045 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 17:14:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G5A | 2841 | G5A G5A 2841bp | 60..116 | 359..303 | 123 | 68.4 | Minus |
BO07325.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:15:31 Download gff for
BO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-PA | 1..807 | 17..821 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:56:35 Download gff for
BO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1155-PA | 1..807 | 17..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:42:54 Download gff for
BO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 113..934 | 7..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:11:13 Download gff for
BO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 113..934 | 7..826 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:11:13 Download gff for
BO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6299240..6299492 | 7..258 | 98 | -> | Plus |
3R | 6299959..6300164 | 259..464 | 100 | -> | Plus |
3R | 6300219..6300581 | 465..826 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:42:54 Download gff for
BO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2124962..2125214 | 7..258 | 98 | -> | Plus |
arm_3R | 2125681..2125886 | 259..464 | 100 | -> | Plus |
arm_3R | 2125941..2126303 | 465..826 | 99 | | Plus |
BO07325.complete Sequence
838 bp (838 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630752
> BO07325.complete
GAAGTTATCAGTCGACATGAAAGTGTTTGCCATCGCTTGTGTGACCCTCT
TGGCGGCCAGCTGCGTCTTTGCCGCGCCCAGTGTTCAAGACAACCAGGTC
GAGGGCGACAATACCCTGGGCCGGGCCGCCCGGTATCTGGGCGCCTGTCT
GGAGAGCGACGACATGGCCACCTGCCTGGCCGTCAAGGGCATCACCGCAC
TCAACCGCGCCGCCAGGAGCAACAACATCGAGCTGGCCAGTGGAGTCACC
TTCCAGAGGGATCCCGCCAGTCCCGTTTCCCGCACGGGAAAATCGATGAG
CGAGCAGGATGTCTATGCCGAGCTGCCCCAGAATGCCGATGAGCGTACTG
GTCGTCTAGTGGATCTGGCCGTCTCTAGTGCCGCCGACTTCCTAAGCACC
CACAACCTGGAGTTCAAGCTGCCCGCCGAGACCACCCAGCAGGTGGCTCG
TGCCCTCGATGAAGGCCGTGGCAAGATCAAGAAGATGCTGGGACCCGTGG
CTCTGGCCATTGGCGCCAAGCTGTTCGCCGTCATTCCCCTGGTGCTCGGG
TTTCTGGCCCTGCTGACCTTCAAGGCCGTGATCGTGGCCAAGCTGGCCTT
CTTCCTGGCCATTCTGGTCGGCGGATCCCGCCTGCTGGGCGGATTCGGCA
ACAAGTTCGGAGGTAACTCCTTTGCCGGAGCCTACAACTCGAACGCATGG
TCCGCACCCGCCAGCGCCGGCTGGAGCTCGGGAGCCTCCTCGTCCTATCC
CTATGCCCGCAGCATCAGCGAGGATGGGTCCGATGCCCAGCAATTGGCCT
ACGCCGGCCAGCAGCAGCAGGCAAGCTTTCTAGACCAT
BO07325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:12:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-RA | 807 | CG1155-PA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-RA | 1091 | CG1155-RA | 124..927 | 17..820 | 4020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6300217..6300574 | 463..820 | 1790 | 100 | Plus |
3R | 32079331 | 3R | 6299251..6299493 | 17..259 | 1215 | 100 | Plus |
3R | 32079331 | 3R | 6299957..6300165 | 257..465 | 1045 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:12:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G5A | 2841 | G5A G5A 2841bp | 60..116 | 359..303 | 123 | 68.4 | Minus |
BO07325.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:54 Download gff for
BO07325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 1..807 | 17..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:03 Download gff for
BO07325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 109..930 | 7..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:54:44 Download gff for
BO07325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 124..927 | 17..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:54 Download gff for
BO07325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 109..930 | 7..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:13:25 Download gff for
BO07325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 124..927 | 17..822 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:25 Download gff for
BO07325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6299251..6299492 | 17..258 | 100 | -> | Plus |
3R | 6299959..6300164 | 259..464 | 100 | -> | Plus |
3R | 6300219..6300574 | 465..822 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:54:44 Download gff for
BO07325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2124973..2125214 | 17..258 | 100 | -> | Plus |
arm_3R | 2125681..2125886 | 259..464 | 100 | -> | Plus |
arm_3R | 2125941..2126296 | 465..822 | 99 | | Plus |
BO07325.pep Sequence
Translation from 16 to 838
> BO07325.pep
MKVFAIACVTLLAASCVFAAPSVQDNQVEGDNTLGRAARYLGACLESDDM
ATCLAVKGITALNRAARSNNIELASGVTFQRDPASPVSRTGKSMSEQDVY
AELPQNADERTGRLVDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEG
RGKIKKMLGPVALAIGAKLFAVIPLVLGFLALLTFKAVIVAKLAFFLAIL
VGGSRLLGGFGNKFGGNSFAGAYNSNAWSAPASAGWSSGASSSYPYARSI
SEDGSDAQQLAYAGQQQQASFLDH
BO07325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-PA | 268 | CG1155-PA | 1..268 | 1..268 | 1336 | 100 | Plus |
Osi12-PA | 295 | CG1154-PA | 11..269 | 3..268 | 286 | 28.5 | Plus |
Osi9-PA | 233 | CG15592-PA | 1..233 | 3..267 | 270 | 29.5 | Plus |
Osi8-PA | 274 | CG15591-PA | 71..274 | 48..250 | 215 | 29.7 | Plus |
Osi6-PB | 312 | CG1151-PB | 27..306 | 1..254 | 206 | 29 | Plus |