Clone BO07364 Report

Search the DGRC for BO07364

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:73
Well:64
Vector:pDNR-Dual
Associated Gene/Transcriptferrochelatase-RC
Protein status:BO07364.pep: validated full length
Sequenced Size:877

Clone Sequence Records

BO07364.3prime Sequence

874 bp (778 high quality bases) assembled on 2005-12-04

> BO07364.3prime
ATGGTCTAGAAAGCTTGCCACCTTAATGGCATCATCAGTTGCGGGCGCCA
GCCAGGGTAGCGGGCCCACCTTGGATTGCCATGCCAGGCTGTAGGGATTC
GTCTGACCAAGTTCCTGCATCACCATGTGTACGCTAGCACCAATCTCCGA
GGGATACGCGTCACCCCGGTTCACAGCCTTAAGGGGAAGGGAGTGGGCAG
TGAAGAGGATGACCACATCATTTCGTTTCGTTTCCACAAATTTGGCCAGC
TCGTCGCGAATTCGCTGGGCAAACGTTTTGATTAGAAGTGGATGAGTGCC
CCACCTGTCGATAATGCTCCATTTGATATCCGAGGGCAGATTATTGCTCC
GATAATGAGTAAATATGGAGTTAAAGCTGGATCCGGAGGTGGCGCAGCTG
TACTGTGGATATTGTGAAAAGAGTACAACGCGCTCTGGTTTGTCCTTTTC
GATCTCGGCCAGCGTGTTCTCAGTGAGGGGATTCACGTAGCGGAAACCGA
CGTAGTGCTTGTGAGGTGCTGTCTCCGGGGAGATTCTGTCCAACTGCTCG
CACATGAGCTGGCCCTGCAGCTCGGTCCACTTAAGAATCGGTGAACCACC
GCCGATCTCCTTGTACTTCTTCTGTACCTCGGGCGTCCTGCGCTGGGCGA
TCCACGGACCAAGACGGCTCTGCACCGGCAGCTGGATCATGTCCCGGTCG
GTCATAATACGCAGGAGGTAGTCATGCACCTGGTCCGTGTGGGTCGGACC
GCCCATGTTCAGCATTAGGATCGCGGTCTTCGGTTTTTGGCCGCTCAGGT
TGCGCACTCCTCCTGCCAGACCACTTGCCAGTCTGCAAAACTTTGTGGTA
TGCAAAAACATGTCGACTGATAAC

BO07364.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:01:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG2098-PC 846 ferrochelatase-RC 1..843 861..19 4190 99.8 Minus
CG2098-PA 1155 ferrochelatase-RA 1..841 861..21 4180 99.8 Minus
CG2098-PB 681 ferrochelatase-RB 45..367 343..21 1615 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-RC 1466 CG2098-RC 87..929 861..19 4200 99.9 Minus
FeCH-RA 1407 CG2098-RA 87..927 861..21 4190 99.9 Minus
FeCH-RB 1338 CG2098-RB 1..480 823..344 2400 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:29:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31811740..31812119 445..824 1900 100 Plus
3R 32079331 3R 31810997..31811321 19..343 1625 100 Plus
3R 32079331 3R 31811377..31811478 344..445 510 100 Plus
3R 32079331 3R 31812171..31812210 822..861 185 97.5 Plus
Blast to na_te.dros performed on 2015-02-13 05:29:37 has no hits.

BO07364.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:16:30 Download gff for BO07364.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2098-PC 1..846 15..861 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:57:57 Download gff for BO07364.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2098-PC 1..846 15..861 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:03:18 Download gff for BO07364.3prime
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 80..936 10..868 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:03:06 Download gff for BO07364.3prime
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 80..936 10..868 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:03:06 Download gff for BO07364.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 31810990..31811321 10..343 99 <- Plus
3R 31811377..31811478 344..445 100 <- Plus
3R 31811741..31812119 446..824 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:03:18 Download gff for BO07364.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27636712..27637043 10..343 99 <- Plus
arm_3R 27637099..27637200 344..445 100 <- Plus
arm_3R 27637463..27637841 446..824 100 <- Plus

BO07364.5prime Sequence

804 bp (731 high quality bases) assembled on 2005-12-04

> BO07364.5prime
GAAGTTATCAGTCGACATGTTTTTGCATAACACAAAGTTTTGCAGACTGG
CAAGTGGTCTGGCAGGAGGAGTGCGCAACCTGAGCGGCCAAAAACCGAAG
ACCGCGATCCTAATGCTGAACATGGGCGGTCCGACCCACACGGACCAGGT
GCATGACTACCTCCTGCGTATTATGACCGACCGGGACATGATCCAGCTGC
CGGTGCAGAGCCGTCTTGGTCCGTGGATCGCCCAGCGCAGGACGCCCGAG
GTACAGAAGAAGTACAAGGAGATCGGCGGTGGTTCACCGATTCTTAAGTG
GACCGAGCTGCAGGGCCAGCTCATGTGCGAGCAGTTGGACAGAATCTCCC
CGGAGACAGCACCTCACAAGCACTACGTCGGTTTCCGCTACGTGAATCCC
CTCACTGAGAACACGCTGGCCGAGATCGAAAAGGACAAACCAGAGCGCGT
TGTACTCTTTTCACAATATCCACAGTACAGCTGCGCCACCTCCGGATCCA
GCTTTAACTCCATATTTACTCATTATCGGAGCAATAATCTGCCCTCGGAT
ATCAAATGGAGCATTATCGACAGGTGGGGCACTCATCCACTTCTAATCAA
AACGTTTGCCCAGCGAATTCGCGACGAGCTGGCCAAATTTGTGGAAACGA
AACGAAATGATGTGGTCATCCTCTTCACTGCCCACTCCCTTCCCCTTAAG
GCTGTGAACCGGGGTGACGCGTATCCCTCGGAGATTGGTGCTAGCGTACA
CATGGTGATGCAGGAACTTGGTCAGACGAATCCCTACAGCCTGGCATGGC
AATC

BO07364.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:01:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG2098-PA 1155 ferrochelatase-RA 1..788 17..804 3940 100 Plus
CG2098-PC 846 ferrochelatase-RC 1..788 17..804 3940 100 Plus
CG2098-PB 681 ferrochelatase-RB 45..314 535..804 1350 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-RC 1466 CG2098-RC 87..874 17..804 3940 100 Plus
FeCH-RA 1407 CG2098-RA 87..874 17..804 3940 100 Plus
FeCH-RB 1338 CG2098-RB 1..480 55..534 2400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31811740..31812119 433..54 1900 100 Minus
3R 32079331 3R 31811052..31811321 804..535 1350 100 Minus
3R 32079331 3R 31811377..31811478 534..433 510 100 Minus
3R 32079331 3R 31812171..31812210 56..17 200 100 Minus
Blast to na_te.dros performed on 2015-02-12 16:07:49 has no hits.

BO07364.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:16:31 Download gff for BO07364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2098-PC 1..788 17..804 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:57:58 Download gff for BO07364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2098-PC 1..788 17..804 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:29:38 Download gff for BO07364.5prime
Subject Subject Range Query Range Percent Splice Strand
FeCH-RA 80..874 10..804 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:43:33 Download gff for BO07364.5prime
Subject Subject Range Query Range Percent Splice Strand
FeCH-RA 80..874 10..804 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:43:33 Download gff for BO07364.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 31811052..31811321 535..804 100 <- Minus
3R 31811377..31811478 433..534 100 <- Minus
3R 31811741..31812119 54..432 100 <- Minus
3R 31812174..31812217 10..53 91   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:29:38 Download gff for BO07364.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27636774..27637043 535..804 100 <- Minus
arm_3R 27637099..27637200 433..534 100 <- Minus
arm_3R 27637463..27637841 54..432 100 <- Minus
arm_3R 27637896..27637939 10..53 91   Minus

BO07364.complete Sequence

877 bp (877 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630761

> BO07364.complete
GAAGTTATCAGTCGACATGTTTTTGCATAACACAAAGTTTTGCAGACTGG
CAAGTGGTCTGGCAGGAGGAGTGCGCAACCTGAGCGGCCAAAAACCGAAG
ACCGCGATCCTAATGCTGAACATGGGCGGTCCGACCCACACGGACCAGGT
GCATGACTACCTCCTGCGTATTATGACCGACCGGGACATGATCCAGCTGC
CGGTGCAGAGCCGTCTTGGTCCGTGGATCGCCCAGCGCAGGACGCCCGAG
GTACAGAAGAAGTACAAGGAGATCGGCGGTGGTTCACCGATTCTTAAGTG
GACCGAGCTGCAGGGCCAGCTCATGTGCGAGCAGTTGGACAGAATCTCCC
CGGAGACAGCACCTCACAAGCACTACGTCGGTTTCCGCTACGTGAATCCC
CTCACTGAGAACACGCTGGCCGAGATCGAAAAGGACAAACCAGAGCGCGT
TGTACTCTTTTCACAATATCCACAGTACAGCTGCGCCACCTCCGGATCCA
GCTTTAACTCCATATTTACTCATTATCGGAGCAATAATCTGCCCTCGGAT
ATCAAATGGAGCATTATCGACAGGTGGGGCACTCATCCACTTCTAATCAA
AACGTTTGCCCAGCGAATTCGCGACGAGCTGGCCAAATTTGTGGAAACGA
AACGAAATGATGTGGTCATCCTCTTCACTGCCCACTCCCTTCCCCTTAAG
GCTGTGAACCGGGGTGACGCGTATCCCTCGGAGATTGGTGCTAGCGTACA
CATGGTGATGCAGGAACTTGGTCAGACGAATCCCTACAGCCTGGCATGGC
AATCCAAGGTGGGCCCGCTACCCTGGCTGGCGCCCGCAACTGATGATGCC
ATTAAGGTGGCAAGCTTTCTAGACCAT

BO07364.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-RC 846 CG2098-PC 1..843 17..859 4215 100 Plus
FeCH-RA 1155 CG2098-PA 1..841 17..857 4205 100 Plus
FeCH-RB 681 CG2098-PB 45..367 535..857 1615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-RC 1466 CG2098-RC 87..929 17..859 4215 100 Plus
FeCH-RA 1407 CG2098-RA 87..927 17..857 4205 100 Plus
FeCH-RB 1338 CG2098-RB 1..480 55..534 2400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31811740..31812119 433..54 1900 100 Minus
3R 32079331 3R 31810997..31811321 859..535 1625 100 Minus
3R 32079331 3R 31811377..31811478 534..433 510 100 Minus
3R 32079331 3R 31812171..31812210 56..17 200 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:31:58 has no hits.

BO07364.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:16:53 Download gff for BO07364.complete
Subject Subject Range Query Range Percent Splice Strand
ferrochelatase-RC 1..846 17..863 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:04:59 Download gff for BO07364.complete
Subject Subject Range Query Range Percent Splice Strand
ferrochelatase-RC 47..903 10..868 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:32 Download gff for BO07364.complete
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 95..929 25..861 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:16:54 Download gff for BO07364.complete
Subject Subject Range Query Range Percent Splice Strand
ferrochelatase-RC 47..903 10..868 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:09 Download gff for BO07364.complete
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 95..929 25..861 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:10:09 Download gff for BO07364.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31810995..31811321 535..861 99 <- Minus
3R 31811377..31811478 433..534 100 <- Minus
3R 31811741..31812119 54..432 100 <- Minus
3R 31812174..31812202 25..53 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:32 Download gff for BO07364.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27636717..27637043 535..861 99 <- Minus
arm_3R 27637099..27637200 433..534 100 <- Minus
arm_3R 27637463..27637841 54..432 100 <- Minus
arm_3R 27637896..27637924 25..53 100   Minus

BO07364.pep Sequence

Translation from 16 to 877

> BO07364.pep
MFLHNTKFCRLASGLAGGVRNLSGQKPKTAILMLNMGGPTHTDQVHDYLL
RIMTDRDMIQLPVQSRLGPWIAQRRTPEVQKKYKEIGGGSPILKWTELQG
QLMCEQLDRISPETAPHKHYVGFRYVNPLTENTLAEIEKDKPERVVLFSQ
YPQYSCATSGSSFNSIFTHYRSNNLPSDIKWSIIDRWGTHPLLIKTFAQR
IRDELAKFVETKRNDVVILFTAHSLPLKAVNRGDAYPSEIGASVHMVMQE
LGQTNPYSLAWQSKVGPLPWLAPATDDAIKVASFLDH

BO07364.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:52:30
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-PC 281 CG2098-PC 1..281 1..281 1490 100 Plus
FeCH-PA 384 CG2098-PA 1..280 1..280 1486 100 Plus
FeCH-PB 226 CG2098-PB 12..122 170..280 568 97.3 Plus