Clone BO07365 Report

Search the DGRC for BO07365

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:73
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG7379-RA
Protein status:BO07365.pep: validated full length
Sequenced Size:1333

Clone Sequence Records

BO07365.3prime Sequence

961 bp (818 high quality bases) assembled on 2005-12-04

> BO07365.3prime
ATGGTCTAGAAAGCTTGCGGTCTTCTCCTCCTTTTCCTTGTTGTAGCGCT
CCAGTTCTTTGAGGAACTGCGCCTTGGGTTTCATTACATTTGGCCGTTCT
CCGCGGCAGTTGGGGCAGAACCACTTGCCTTTTGGTTTTAGTACCAGGGA
GACGCACGAAAAATGGAACCACTCGATGGGGCACAGGTCATTGTCGCACA
GGATCATCTCGCCAAAGGAGATCTGATTGCAGACACAGTAGGTCGGCTCG
TCCGGATCAATGGTCTCCGGCGGCGGCGTCTCCTCTCGCGTACTGGCATT
GGCATTTGAAGCCCCAGAACCGCGTACCTTGCGCTTTTTCTTCTTGCCGG
AATTATTGCCACCAACTACGCCGGCTCCGCTGGCACCACCACCTCCGGCT
GCTCCACTGCTCGTGGCTGCAGAGCCGCTAGCCAAACTGCCAGAAGCCGA
CTGCAGACTGGCCTTTCGTCCCTGTCCCGCTCCACTGGCACCGCCCAACG
AGGATTTGCGCTCGCCACTGCCACCACCACTGCCACTGGCTTCATTTGCC
GAGTTGGACTCGTTGCCGCCCATCTCCAGAGAGCTTCCGTTGTTAACAAC
ACTCTCGTTTCGCCTCCTCGACCGCTTGCTACCTGTGCGCTGCAGTTCTC
CGCCTCCTCCGCCGCTGGCATTGCCATTGGAGCCGCTGTTGCCACCATTA
CTGACATGGCTCGAGCGCTCCGAGTTGGGCGTTGAGCCGCCACCGTTGCC
GGAGGTCATGGCATTAGAACCAGGCACAACACCACCTGCATAGCCGCCCA
AGGCGTACAGATCTTTGGCCGAAAGCANGCCGTTTCCATTTAGGCCACCG
TTGCCAGTGCCCGCTTGGTTGCCCTGCTCCCTCATCGGGCTCTGCAGGCG
TTGCAGCTTCGAAGGCGTGCCATCGTCCAGGAGCGCATACCGATCGCGGT
CCTCCTTCAGG

BO07365.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:01:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7379-PA 1302 CG7379-RA 357..1299 961..19 4696 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 14:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG7379-RA 1787 CG7379-RA 552..1494 961..19 4704 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 14:58:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17796934..17797672 223..961 3684 99.9 Plus
3R 32079331 3R 17796669..17796875 19..225 1035 100 Plus
Blast to na_te.dros performed on 2015-02-10 14:58:13 has no hits.

BO07365.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:16:32 Download gff for BO07365.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7379-PA 357..1302 18..961 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:58:00 Download gff for BO07365.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7379-PA 357..1302 18..961 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:06:03 Download gff for BO07365.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7379-RA 552..1494 19..961 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:11:39 Download gff for BO07365.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7379-RA 552..1494 19..961 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:11:39 Download gff for BO07365.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 17796669..17796872 19..222 100 <- Plus
3R 17796934..17797672 223..961 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:06:03 Download gff for BO07365.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13622391..13622594 19..222 100 <- Plus
arm_3R 13622656..13623394 223..961 99   Plus

BO07365.5prime Sequence

936 bp (860 high quality bases) assembled on 2005-12-04

> BO07365.5prime
GAAGTTATCAGTCGACATGATAAACCCCATTGCATCCGAGTCGGAGGCCA
TCAATTCGGCCACCTATGTGGACAACTATATCGATTCGGTGGAAAATCTG
CCGGACGACGTGCAGCGCCAGTTGTCACGCATCCGCGACATAGACGTCCA
GTACAGAGGCCTCATTCGCGACGTAGACCACTACTACGACCTGTATCTGT
CCCTGCAGAACTCCGCGGATGCCGGGCGACGGTCTCGAAGCATCTCCAGG
ATGCACCAGAGTCTCATTCAGGCGCAGGAACTGGGCGACGAAAAAATGCA
GATCGTCAATCATATGCAGGAGATAATCGACGGCAAGCTGCGCCAGCTGG
ACACCGACCAGCAGAACCTGGACCTGAAGGAGGACCGCGATCGGTATGCG
CTCCTGGACGATGGCACGCCTTCGAAGCTGCAACGCCTGCAGAGCCCGAT
GAGGGAGCAGGGCAACCAAGCGGGCACTGGCAACGGTGGCCTAAATGGAA
ACGGCCTGCTTTCGGCCAAAGATCTGTACGCCTTGGGCGGCTATGCAGGT
GGTGTTGTGCCTGGTTCTAATGCCATGACCTCCGGCAACGGTGGCGGCTC
AACGCCCAACTCGGAGCGCTCGAGCCATGTCAGTAATGGTGGCAACAGCG
GCTCCAATGGCAATGCCAGCGGCGGAGGAGGCGGAGAACTGCAGCGCACA
GGTAGCAAGCGGTCGAGGAGGCGAAACGAGAGTGTTGTTAACAACGGAAG
CTCTCTGGAGATGGGCGGCAACGAGTCCAACTCGGCAAATGAAGCCAGTG
GCAGTGGTGGTGGCAGTGGCGAGCGCAAATCCTCGTTGGGCGGTGCCAGT
GGAGCGGGACAGGGACGAAAAGCCAGTCTGCAGTCGGCTTCTGGCAGTTT
GGCTAGCGGCTCTGCAGCCACGAGCAGTGGAGCAGC

BO07365.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG7379-PA 1302 CG7379-RA 1..920 17..936 4575 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:23:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG7379-RA 1787 CG7379-RA 196..1115 17..936 4585 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:23:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17797109..17797888 936..157 3885 99.9 Minus
3R 32079331 3R 17797967..17798109 159..17 715 100 Minus
Blast to na_te.dros performed on 2015-02-04 20:23:53 has no hits.

BO07365.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:16:34 Download gff for BO07365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7379-PA 1..920 17..936 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:58:01 Download gff for BO07365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7379-PA 1..920 17..936 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:25:06 Download gff for BO07365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7379-RA 188..1115 9..936 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:49:08 Download gff for BO07365.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7379-RA 188..1115 9..936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:49:08 Download gff for BO07365.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17797109..17797886 159..936 99 <- Minus
3R 17797968..17798113 9..158 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:25:06 Download gff for BO07365.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13622831..13623608 159..936 99 <- Minus
arm_3R 13623690..13623835 9..158 97   Minus

BO07365.complete Sequence

1333 bp (1333 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630762

> BO07365.complete
GAAGTTATCAGTCGACATGATAAACCCCATTGCATCCGAGTCGGAGGCCA
TCAATTCGGCCACCTATGTGGACAACTATATCGATTCGGTGGAAAATCTG
CCGGACGACGTGCAGCGCCAGTTGTCACGCATCCGCGACATAGACGTCCA
GTACAGAGGCCTCATTCGCGACGTAGACCACTACTACGACCTGTATCTGT
CCCTGCAGAACTCCGCGGATGCCGGGCGACGGTCTCGAAGCATCTCCAGG
ATGCACCAGAGTCTCATTCAGGCGCAGGAACTGGGCGACGAAAAAATGCA
GATCGTCAATCATATGCAGGAGATAATCGACGGCAAGCTGCGCCAGCTGG
ACACCGACCAGCAGAACCTGGACCTGAAGGAGGACCGCGATCGGTATGCG
CTCCTGGACGATGGCACGCCTTCGAAGCTGCAACGCCTGCAGAGCCCGAT
GAGGGAGCAGGGCAACCAAGCGGGCACTGGCAACGGTGGCCTAAATGGAA
ACGGCCTGCTTTCGGCCAAAGATCTGTACGCCTTGGGCGGCTATGCAGGT
GGTGTTGTGCCTGGTTCTAATGCCATGACCTCCGGCAACGGTGGCGGCTC
AACGCCCAACTCGGAGCGCTCGAGCCATGTCAGTAATGGTGGCAACAGCG
GCTCCAATGGCAATGCCAGCGGCGGAGGAGGCGGAGAACTGCAGCGCACA
GGTAGCAAGCGGTCGAGGAGGCGAAACGAGAGTGTTGTTAACAACGGAAG
CTCTCTGGAGATGGGCGGCAACGAGTCCAACTCGGCAAATGAAGCCAGTG
GCAGTGGTGGTGGCAGTGGCGAGCGCAAATCCTCGTTGGGCGGTGCCAGT
GGAGCGGGACAGGGACGAAAGGCCAGTCTGCAGTCGGCTTCTGGCAGTTT
GGCTAGCGGCTCTGCAGCCACGAGCAGTGGAGCAGCCGGAGGTGGTGGTG
CCAGCGGAGCCGGCGTAGTTGGTGGCAATAATTCCGGCAAGAAGAAAAAG
CGCAAGGTACGCGGTTCTGGGGCTTCAAATGCCAATGCCAGTACGCGAGA
GGAGACGCCGCCGCCGGAGACCATTGATCCGGACGAGCCGACCTACTGTG
TCTGCAATCAGATCTCCTTTGGCGAGATGATCCTGTGCGACAATGACCTG
TGCCCCATCGAGTGGTTCCATTTTTCGTGCGTCTCCCTGGTACTAAAACC
AAAAGGCAAGTGGTTCTGCCCCAACTGCCGCGGAGAACGGCCAAATGTAA
TGAAACCCAAGGCGCAGTTCCTCAAAGAACTGGAGCGCTACAACAAGGAA
AAGGAGGAGAAGACCGCAAGCTTTCTAGACCAT

BO07365.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG7379-RA 1302 CG7379-PA 1..1299 17..1315 6495 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:46:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG7379-RA 1787 CG7379-RA 196..1494 17..1315 6495 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17796934..17797888 1111..157 4775 100 Minus
3R 32079331 3R 17796669..17796875 1315..1109 1035 100 Minus
3R 32079331 3R 17797967..17798109 159..17 715 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:46:48 has no hits.

BO07365.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:16:56 Download gff for BO07365.complete
Subject Subject Range Query Range Percent Splice Strand
CG7379-RA 1..1302 17..1316 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:38:57 Download gff for BO07365.complete
Subject Subject Range Query Range Percent Splice Strand
CG7379-RA 209..1515 9..1315 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:56 Download gff for BO07365.complete
Subject Subject Range Query Range Percent Splice Strand
CG7379-RA 196..1494 17..1317 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:16:56 Download gff for BO07365.complete
Subject Subject Range Query Range Percent Splice Strand
CG7379-RA 209..1515 9..1315 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:06 Download gff for BO07365.complete
Subject Subject Range Query Range Percent Splice Strand
CG7379-RA 196..1494 17..1317 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:06 Download gff for BO07365.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17796667..17796872 1112..1317 99 <- Minus
3R 17796934..17797886 159..1111 100 <- Minus
3R 17797968..17798109 17..158 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:56 Download gff for BO07365.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13622389..13622594 1112..1317 99 <- Minus
arm_3R 13622656..13623608 159..1111 100 <- Minus
arm_3R 13623690..13623831 17..158 100   Minus

BO07365.pep Sequence

Translation from 16 to 1333

> BO07365.pep
MINPIASESEAINSATYVDNYIDSVENLPDDVQRQLSRIRDIDVQYRGLI
RDVDHYYDLYLSLQNSADAGRRSRSISRMHQSLIQAQELGDEKMQIVNHM
QEIIDGKLRQLDTDQQNLDLKEDRDRYALLDDGTPSKLQRLQSPMREQGN
QAGTGNGGLNGNGLLSAKDLYALGGYAGGVVPGSNAMTSGNGGGSTPNSE
RSSHVSNGGNSGSNGNASGGGGGELQRTGSKRSRRRNESVVNNGSSLEMG
GNESNSANEASGSGGGSGERKSSLGGASGAGQGRKASLQSASGSLASGSA
ATSSGAAGGGGASGAGVVGGNNSGKKKKRKVRGSGASNANASTREETPPP
ETIDPDEPTYCVCNQISFGEMILCDNDLCPIEWFHFSCVSLVLKPKGKWF
CPNCRGERPNVMKPKAQFLKELERYNKEKEEKTASFLDH

BO07365.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7379-PA 433 CG7379-PA 1..433 1..433 2248 100 Plus
CG9293-PA 285 CG9293-PA 112..282 223..408 294 36.3 Plus
Ing3-PA 686 CG6632-PA 430..686 177..410 294 31 Plus
CG9293-PB 271 CG9293-PB 112..268 223..408 284 34.2 Plus
Mur89F-PC 2158 CG4090-PC 508..751 105..360 185 26.6 Plus
Ing3-PA 686 CG6632-PA 3..358 17..342 157 22.2 Plus