Clone Sequence Records
BO07430.3prime Sequence
894 bp (892 high quality bases) assembled on 2006-01-06
> BO07430.3prime
ATGGTCTAGAAAGCTTGCCATATCCTCCACGCTGTACTTGTAGGCCTCAT
CCTGCACGGCCCGCCGTTCGTTCTGTTTGTCGAACCAACGCTGCTCGTAG
CCGTTGGATCGATCGACGCCATCCCAGCGATATCCTGGTCGGATGCCAAA
TCGGTTCTCCGGAAAGCTGCCCTCGTACTTGGGCATCACCGGCTTGTTGT
CCTGCTGGTCGCGTTTCTTGCGCTTCTGGCGCATGTACTCCAGCATCGGG
TCGTCGGCGTGCTCCTGTTCGCGCAGATGCCTGTCCAGATCCTCGTCGTT
GGCATAGCGAGCCACCGGTTTGGAGGCCTCATGGACCATCTCCTCCAGGC
GGGACTTGTGATCTTCTATTTGCTTCAACCCCTTGCCCCAGCGATCGTAC
AGTTCCTTCTTCTTTTTCTCGTGCTCCTCTTTGCGGCCCTGCTCGGCGGG
ATCCTCATTGGCGGCATCTCGTGCTCGGTGTCCCTTTCTGCGAGTACTGC
GCACCTGCACATCGCCATCACGACCGGAAATTTCGCTGGACATTTTCTCG
AATAGTTCATGTTCTTGTCGACGCCTTTCGTCGGTTTCCTTCTTCAGCGA
TTTCGCATCCTGCAGTCCAGCTTTCTTGCCATCTAGTGTCTTGGTGGATT
TCGGCTTGTGTGTCGGAGGTGGAGATGCTGATTTGCTGGGCGATGCCTTG
GCCCAGCGACTTTTCCTTTCTTCCTTGAAGCGATTACGAGGCGGTGGACT
GCGCTCTCGACTTCTGTGATTTCTGGCCGGGCTTTGGTCGGAGTCGTGAC
GTCTGCGTGGTGATTTGTCTCGTTTTCTGGTTGGACTTTGGTCGAAGTCT
CGTTTTCTTCGCGGTGGCGATTGATCTACATCCTTGGGTCTTCT
BO07430.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:02:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-PA | 1944 | CG13625-RA | 1066..1941 | 894..19 | 4380 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 09:59:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-RA | 2094 | CG13625-RA | 1146..2021 | 894..19 | 4380 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 09:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24583140..24584015 | 19..894 | 4380 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 09:59:28 has no hits.
BO07430.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:18:19 Download gff for
BO07430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-PA | 1066..1944 | 16..894 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:00:23 Download gff for
BO07430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-PA | 1066..1944 | 16..894 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:44:49 Download gff for
BO07430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 1146..2029 | 11..894 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:58:13 Download gff for
BO07430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 1146..2029 | 11..894 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:58:13 Download gff for
BO07430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24583132..24584015 | 11..894 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:44:49 Download gff for
BO07430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20408854..20409737 | 11..894 | 99 | | Plus |
BO07430.5prime Sequence
867 bp (786 high quality bases) assembled on 2006-01-06
> BO07430.5prime
GAAGTTATCAGTCGACATGTCCATGCAAAAGGCCAAAGTCATCGACCAGA
AGGAGTACCTCAAGAAGTACCTATCCGGCGACAAGGAGAAGAAGAAGAAA
AAGAAGGAGAAGAAGCACAAAAAGAATTCGGCCAACACCAAAGTGAAAAT
CATCGATGACGACGCCTACGAAAATGATAATCTGGAAATGGACGAAGATC
TACTGCTGGGCGGCGAGGATGCGCCTCAAATTGTGGGCGAGTACATCGAA
GAGGATCCCAATGTGCGCAGCAAGTGGCGCAACATTGCCGTCAAGGATGA
AATCAAAGAAGAGCACGAGGAATCCTCGCCAGCAACTGGCATTCGCATCA
AACAGGAGCCCTTGGATGAGGAGCAGGAGATGTGGGGACGCAAGGCGACA
GTTGTTAAGGTTAAGGATGAATTCTCACCATCCAGACGAAGTTCACCCGT
CAGAATTAAGCAAGAAAAACGCAGCAGCTCTAGGGATTTAAGCCCAGCGA
GATCGAGTAAGCCAGCAAAGCGAGAAGAGAGTCCTCAAAGGGGGCGAAGA
AGGGCGGGAAGCTCAGATCAGAGTCCCACCAGACGAGGGCGAGATGGCGA
TCAGTCTCCGCCACGCCAAAAGCACAGGGATTCCGATCAGAGTCCACCCC
GAAAGGCCAGGAATGGCAATCAATCGCCAGTCAGAAAAAGGCGGGATTCC
GACCAAAGTCCGCCAAGAAAACGAACGGGAAAAGCATCACCCACTCGAAG
GAGAAGGGATTCCGATCAATCGCCACCCAGACGCCGCAGAAGTAACTCCG
ATCAGAGTCCGCCAAGGCGACGTAGAGACAAGGATTCAACTCCGCCCAGA
AGGAGGAAAGATTCCGA
BO07430.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:02:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-PA | 1944 | CG13625-RA | 1..851 | 17..867 | 4255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:15:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-RA | 2094 | CG13625-RA | 81..931 | 17..867 | 4255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:15:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24584230..24585080 | 867..17 | 4255 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 05:15:29 has no hits.
BO07430.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:18:21 Download gff for
BO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-PA | 1..850 | 17..866 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:00:24 Download gff for
BO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-PA | 1..850 | 17..866 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:22:12 Download gff for
BO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..930 | 17..866 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:41:27 Download gff for
BO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..930 | 17..866 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:41:27 Download gff for
BO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24584231..24585080 | 17..866 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:22:12 Download gff for
BO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20409953..20410802 | 17..866 | 100 | | Minus |
BO07430.complete Sequence
1975 bp (1975 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ630784
> BO07430.complete
GAAGTTATCAGTCGACATGTCCATGCAAAAGGCCAAAGTCATCGACCAGA
AGGAGTACCTCAAGAAGTACCTATCCGGCGACAAGGAGAAGAAGAAGAAA
AAGAAGGAGAAGAAGCACAAAAAGAATTCGGCCAACACCAAAGTGAAAAT
CATCGATGACGACGCCTACGAAAATGATAATCTGGAAATGGACGAAGATC
TACTGCTGGGCGGCGAGGATGCGCCTCAAATTGTGGGCGAGTACATCGAA
GAGGATCCCAATGTGCGCAGCAAGTGGCGCAACATTGCCGTCAAGGATGA
AATCAAAGAAGAGCACGAGGAATCCTCGCCAGCAACTGGCATTCGCATCA
AACAGGAGCCCTTGGATGAGGAGCAGGAGATGTGGGGACGCAAGGCGACA
GTTGTTAAGGTTAAGGATGAATTCTCACCATCCAGACGAAGTTCACCCGT
CAGAATTAAGCAAGAAAAACGCAGCAGCTCTAGGGATTTAAGCCCAGCGA
GATCGAGTAAGCCAGCAAAGCGAGAAGAGAGTCCTCAAAGGGGGCGAAGA
AGGGCGGGAAGCTCAGATCAGAGTCCCACCAGACGAGGGCGAGATGGCGA
TCAGTCTCCGCCACGCCAAAAGCACAGGGATTCCGATCAGAGTCCACCCC
GAAAGGCCAGGAATGGCAATCAATCGCCAGTCAGAAAAAGGCGGGATTCC
GACCAAAGTCCGCCAAGAAAACGAACGGGAAAAGCATCACCCACTCGAAG
GAGAAGGGATTCCGATCAATCGCCACCCAGACGCCGCAGAAGTAACTCCG
ATCAGAGTCCGCCAAGGCGACGTAGAGACAAGGATTCAACTCCGCCCAGA
AGGAGGAAAGATTCCGATCAAAGCCCACCTCGAAGGCGTAAAGCAGACGA
TCAATCTCCGGTGCGAAGGGAAAGGAAAGACTCCGACCAAAGTCCGCCTA
GGAAACGGAGAGACAATGACCAGTCTCCAGTGCGAAGGAGGCGGGATTCA
GATCAAAGCCCGCCCCGAAGACGCAGAGATGACAAGCAAACGCCGCCAAG
GAGGAGAAGAAACTCCGATCAAAGCCCGCCAAGAAGACCCAAGGATGTAG
ATCAATCGCCACCGCGAAGAAAACGAGACTTCGACCAAAGTCCAACCAGA
AAACGAGACAAATCACCACGCAGACGTCACGACTCCGACCAAAGCCCGGC
CAGAAATCACAGAAGTCGAGAGCGCAGTCCACCGCCTCGTAATCGCTTCA
AGGAAGAAAGGAAAAGTCGCTGGGCCAAGGCATCGCCCAGCAAATCAGCA
TCTCCACCTCCGACACACAAGCCGAAATCCACCAAGACACTAGATGGCAA
GAAAGCTGGACTGCAGGATGCGAAATCGCTGAAGAAGGAAACCGACGAAA
GGCGTCGACAAGAACATGAACTATTCGAGAAAATGTCCAGCGAAATTTCC
GGTCGTGATGGCGATGTGCAGGTGCGCAGTACTCGCAGAAAGGGACACCG
AGCACGAGATGCCGCCAATGAGGATCCCGCCGAGCAGGGCCGCAAAGAGG
AGCACGAGAAAAAGAAGAAGGAACTGTACGATCGCTGGGGCAAGGGGTTG
AAGCAAATAGAAGATCACAAGTCCCGCCTGGAGGAGATGGTCCATGAGGC
CTCCAAACCGGTGGCTCGCTATGCCAACGACGAGGATCTGGACAGGCATC
TGCGCGAACAGGAGCACGCCGACGACCCGATGCTGGAGTACATGCGCCAG
AAGCGCAAGAAACGCGACCAGCAGGACAACAAGCCGGTGATGCCCAAGTA
CGAGGGCAGCTTTCCGGAGAACCGATTTGGCATCCGACCAGGATATCGCT
GGGATGGCGTCGATCGATCCAACGGCTACGAGCAGCGTTGGTTCGACAAA
CAGAACGAACGGCGGGCCGTGCAGGATGAGGCCTACAAGTACAGCGTGGA
GGATATGGCAAGCTTTCTAGACCAT
BO07430.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:59:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-RA | 1944 | CG13625-PA | 1..1941 | 17..1957 | 9705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:59:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-RA | 2094 | CG13625-RA | 81..2021 | 17..1957 | 9705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:59:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24583140..24585080 | 1957..17 | 9705 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:59:52 has no hits.
BO07430.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:03:11 Download gff for
BO07430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 1..1944 | 17..1960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:04:04 Download gff for
BO07430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 54..2002 | 17..1965 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:48 Download gff for
BO07430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..2021 | 17..1959 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:03:11 Download gff for
BO07430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 54..2002 | 17..1965 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:32:00 Download gff for
BO07430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..2021 | 17..1959 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:32:00 Download gff for
BO07430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24583137..24585080 | 17..1959 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:48 Download gff for
BO07430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20408859..20410802 | 17..1959 | 99 | | Minus |
BO07430.pep Sequence
Translation from 16 to 1975
> BO07430.pep
MSMQKAKVIDQKEYLKKYLSGDKEKKKKKKEKKHKKNSANTKVKIIDDDA
YENDNLEMDEDLLLGGEDAPQIVGEYIEEDPNVRSKWRNIAVKDEIKEEH
EESSPATGIRIKQEPLDEEQEMWGRKATVVKVKDEFSPSRRSSPVRIKQE
KRSSSRDLSPARSSKPAKREESPQRGRRRAGSSDQSPTRRGRDGDQSPPR
QKHRDSDQSPPRKARNGNQSPVRKRRDSDQSPPRKRTGKASPTRRRRDSD
QSPPRRRRSNSDQSPPRRRRDKDSTPPRRRKDSDQSPPRRRKADDQSPVR
RERKDSDQSPPRKRRDNDQSPVRRRRDSDQSPPRRRRDDKQTPPRRRRNS
DQSPPRRPKDVDQSPPRRKRDFDQSPTRKRDKSPRRRHDSDQSPARNHRS
RERSPPPRNRFKEERKSRWAKASPSKSASPPPTHKPKSTKTLDGKKAGLQ
DAKSLKKETDERRRQEHELFEKMSSEISGRDGDVQVRSTRRKGHRARDAA
NEDPAEQGRKEEHEKKKKELYDRWGKGLKQIEDHKSRLEEMVHEASKPVA
RYANDEDLDRHLREQEHADDPMLEYMRQKRKKRDQQDNKPVMPKYEGSFP
ENRFGIRPGYRWDGVDRSNGYEQRWFDKQNERRAVQDEAYKYSVEDMASF
LDH
BO07430.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:29:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-PA | 647 | CG13625-PA | 1..647 | 1..647 | 3419 | 100 | Plus |
| CG2839-PA | 826 | CG2839-PA | 272..735 | 117..589 | 290 | 18.3 | Plus |
| CG2839-PA | 826 | CG2839-PA | 266..748 | 26..574 | 287 | 21.5 | Plus |
| Moca-cyp-PC | 685 | CG1866-PC | 101..628 | 22..544 | 280 | 24.2 | Plus |
| Moca-cyp-PB | 685 | CG1866-PB | 101..628 | 22..544 | 280 | 24.2 | Plus |
| Moca-cyp-PA | 970 | CG1866-PA | 386..913 | 22..544 | 280 | 24.2 | Plus |
| CG2839-PA | 826 | CG2839-PA | 268..741 | 146..646 | 279 | 18.4 | Plus |
| CG2839-PA | 826 | CG2839-PA | 283..798 | 9..522 | 273 | 18.2 | Plus |
| Moca-cyp-PC | 685 | CG1866-PC | 239..681 | 12..480 | 242 | 24.6 | Plus |
| Moca-cyp-PB | 685 | CG1866-PB | 239..681 | 12..480 | 242 | 24.6 | Plus |
| CG2839-PA | 826 | CG2839-PA | 383..737 | 4..418 | 218 | 19.3 | Plus |
| Moca-cyp-PC | 685 | CG1866-PC | 3..477 | 161..589 | 165 | 20.6 | Plus |
| Moca-cyp-PB | 685 | CG1866-PB | 3..477 | 161..589 | 165 | 20.6 | Plus |
