Clone Sequence Records
BO07452.3prime Sequence
895 bp (826 high quality bases) assembled on 2006-01-06
> BO07452.3prime
ATGGTCTAGAAAGCTTGCGCTATCGTCCTGCGGTATCCGAATTTCCTCGC
ACATCCCCTCCTCCCGGTGAATGCTCGCCCAGTGCTGTGAGAGCTCCCGG
CTGATGGCCTTGCGGAACACCATGCACGATATGTGCGGCAACTTCTCGAA
GCGTACCCGTAGCAGTCCAATCCTGGCCAGGGAGTAGCGCCAGTTTTTCA
TGAGGTGGGCGTTTTTGCCAACATGTTGGGAGTCCGGTGTGATGAGCACA
AGGATGCCCTCGGGCAGCAGCAGGTCGTAGGCCTGAAGGCAGCACTGTAG
TCTCTGCTCGGCGCTGGGCATGTATTCCAGTAGCAAACTGAAAATGACGC
ACTCGTAGTGGCTTGCTGGTAGCCTTCTTACGCTGCCCTCCTCCAGCTCA
GGTTCTCGTATTCCGGGTACCACCTCCACTTTGAGGAAATCCGCCTGCAG
CACATCTTCGGTGGCGGGACACAAGTCCAGGGCGGTTACCTCCAAGTGCG
GAGCACTGGAAAAGGGATTGAAGCAGCTGCCCACATCCAGGACGTGCAGC
CTGTCCGGCGGCTCCTCCATCAGCCTGCACTGCACCTCGCCCAGTTTTCC
CTCGGCTCTGTAGGATTCCAGGAGTCGCTGCTCCCGCTGGCGCTTCTGCA
AATATATGCCCTCGGTAAAGAAGTACTTGGTGATGTAGTCGATGGCCCAC
TTGATGCGGCTGCGTGCCTGCAGCTCCACCTTCCCATCGTTGGTCTCCCA
TATGGCCGCCAGTTGCTTCATCGCCTTGGCGTACTCCGCCAGTTGCTTGG
CGTTCCTGGGACTCGTGTGCTCCTGCCAGGCCGCTGTGGCGCCATACTCC
TTAGTCAACTGGCGCAGGCTTTCGTGGCAGCTCTTCACGATGCTG
BO07452.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:03:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-PA | 909 | CG3570-RA | 30..906 | 895..19 | 4385 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:24:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 1099 | CG3570-RA | 108..984 | 895..19 | 4385 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:23:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24603679..24604555 | 895..19 | 4385 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 16:24:00 has no hits.
BO07452.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:19:02 Download gff for
BO07452.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-PA | 30..909 | 18..895 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:01:22 Download gff for
BO07452.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-PA | 30..909 | 18..895 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:11:44 Download gff for
BO07452.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 108..984 | 19..895 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:52:49 Download gff for
BO07452.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 108..984 | 19..895 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:52:49 Download gff for
BO07452.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24603679..24604555 | 19..895 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:11:44 Download gff for
BO07452.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20491202..20492078 | 19..895 | 100 | | Minus |
BO07452.5prime Sequence
933 bp (885 high quality bases) assembled on 2006-01-06
> BO07452.5prime
GAAGTTATCAGTCGACATGGCCACGGAGGAGCACCAGCGCCTGGCCAGCA
TCGTGAAGAGCTGCCACGAAAGCCTGCGCCAGTTGACTAAGGAGTATGGC
GCCACAGCGGCCTGGCAGGAGCACACGAGTCCCAGGAACGCCAAGCAACT
GGCGGAGTACGCCAAGGCGATGAAGCAACTGGCGGCCATATGGGAGACCA
ACGATGGGAAGGTGGAGCTGCAGGCACGCAGCCGCATCAAGTGGGCCATC
GACTACATCACCAAGTACTTCTTTACCGAGGGCATATATTTGCAGAAGCG
CCAGCGGGAGCAGCGACTCCTGGAATCCTACAGAGCCGAGGGAAAACTGG
GCGAGGTGCAGTGCAGGCTGATGGAGGAGCCGCCGGACAGGCTGCACGTC
CTGGATGTGGGCAGCTGCTTCAATCCCTTTTCCAGTGCTCCGCACTTGGA
GGTAACCGCCCTGGACTTGTGTCCCGCCACCGAAGATGTGCTGCAGGCGG
ATTTCCTCAAAGTGGAGGTGGTACCCGGAATACGAGAACCTGAGCTGGAG
GAGGGCAGCGTAAGAAGGCTACCAGCAAGCCACTACGAGTGCGTCATTTT
CAGTTTGCTACTGGAATACATGCCCAGCGCCGAGCAGAGACTACAGTGCT
GCCTTCAGGCCTACGACCTGCTGCTGCCCGAGGGCATCCTTGTGCTCATC
ACACCGGACTCCCAACATGTTGGCAAAAACGCCCACCTCATGAAAAACTG
GCGCTACTCCCTGGCCAGGATTGGACTGCTACGGGTACGCTTCGAGAAGT
TGCCGCACATATCGTGCATGGTGTTCCGCAAGGCCATCAGCCGGGAGCTC
TCACAGCACTGGGCGAGCATTCACCGGGAGGAGGGGATGTGCGAGGAAAT
TCGGATACCGCAGGACGATAGCGCAAGCTTTCT
BO07452.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:03:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-PA | 909 | CG3570-RA | 1..906 | 17..922 | 4530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:13:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 1099 | CG3570-RA | 75..984 | 13..922 | 4535 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:13:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24603646..24604555 | 13..922 | 4535 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 07:13:31 has no hits.
BO07452.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:19:03 Download gff for
BO07452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-PA | 1..909 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:01:23 Download gff for
BO07452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-PA | 1..909 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:36:13 Download gff for
BO07452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 73..984 | 10..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:16:35 Download gff for
BO07452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 73..984 | 10..922 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:16:35 Download gff for
BO07452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24603644..24604555 | 10..922 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:36:13 Download gff for
BO07452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20491167..20492078 | 10..922 | 99 | | Plus |
BO07452.complete Sequence
940 bp (940 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630790
> BO07452.complete
GAAGTTATCAGTCGACATGGCCACGGAGGAGCACCAGCGCCTGGCCAGCA
TCGTGAAGAGCTGCCACGAAAGCCTGCGCCAGTTGACTAAGGAGTATGGC
GCCACAGCGGCCTGGCAGGAGCACACGAGTCCCAGGAACGCCAAGCAACT
GGCGGAGTACGCCAAGGCGATGAAGCAACTGGCGGCCATATGGGAGACCA
ACGATGGGAAGGTGGAGCTGCAGGCACGCAGCCGCATCAAGTGGGCCATC
GACTACATCACCAAGTACTTCTTTACCGAGGGCATATATTTGCAGAAGCG
CCAGCGGGAGCAGCGACTCCTGGAATCCTACAGAGCCGAGGGAAAACTGG
GCGAGGTGCAGTGCAGGCTGATGGAGGAGCCGCCGGACAGGCTGCACGTC
CTGGATGTGGGCAGCTGCTTCAATCCCTTTTCCAGTGCTCCGCACTTGGA
GGTAACCGCCCTGGACTTGTGTCCCGCCACCGAAGATGTGCTGCAGGCGG
ATTTCCTCAAAGTGGAGGTGGTACCCGGAATACGAGAACCTGAGCTGGAG
GAGGGCAGCGTAAGAAGGCTACCAGCAAGCCACTACGAGTGCGTCATTTT
CAGTTTGCTACTGGAATACATGCCCAGCGCCGAGCAGAGACTACAGTGCT
GCCTTCAGGCCTACGACCTGCTGCTGCCCGAGGGCATCCTTGTGCTCATC
ACACCGGACTCCCAACATGTTGGCAAAAACGCCCACCTCATGAAAAACTG
GCGCTACTCCCTGGCCAGGATTGGACTGCTACGGGTACGCTTCGAGAAGT
TGCCGCACATATCGTGCATGGTGTTCCGCAAGGCCATCAGCCGGGAGCTC
TCACAGCACTGGGCGAGCATTCACCGGGAGGAGGGGATGTGCGAGGAAAT
TCGGATACCGCAGGACGATAGCGCAAGCTTTCTAGACCAT
BO07452.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:31:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 909 | CG3570-PA | 1..906 | 17..922 | 4530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:31:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 1099 | CG3570-RA | 75..984 | 13..922 | 4535 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:31:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24603646..24604555 | 13..922 | 4535 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:31:22 has no hits.
BO07452.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:16:32 Download gff for
BO07452.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 1..909 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:38:28 Download gff for
BO07452.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 33..944 | 10..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:29 Download gff for
BO07452.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 79..984 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:16:32 Download gff for
BO07452.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 33..944 | 10..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:09:57 Download gff for
BO07452.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 79..984 | 17..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:09:57 Download gff for
BO07452.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24603650..24604555 | 17..924 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:29 Download gff for
BO07452.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20491173..20492078 | 17..924 | 99 | | Plus |
BO07452.pep Sequence
Translation from 16 to 940
> BO07452.pep
MATEEHQRLASIVKSCHESLRQLTKEYGATAAWQEHTSPRNAKQLAEYAK
AMKQLAAIWETNDGKVELQARSRIKWAIDYITKYFFTEGIYLQKRQREQR
LLESYRAEGKLGEVQCRLMEEPPDRLHVLDVGSCFNPFSSAPHLEVTALD
LCPATEDVLQADFLKVEVVPGIREPELEEGSVRRLPASHYECVIFSLLLE
YMPSAEQRLQCCLQAYDLLLPEGILVLITPDSQHVGKNAHLMKNWRYSLA
RIGLLRVRFEKLPHISCMVFRKAISRELSQHWASIHREEGMCEEIRIPQD
DSASFLDH
BO07452.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:53:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-PA | 302 | CG3570-PA | 1..302 | 1..302 | 1580 | 100 | Plus |
