Clone Sequence Records
BO07507.3prime Sequence
851 bp (807 high quality bases) assembled on 2006-01-06
> BO07507.3prime
ATGGTCTAGAAAGCTTGCCAGCTCGTTGCGCTGCGTTTTGGAGGGATTTT
CTGATGCCCGTCGGGGGAATTCCTTGTGGGAAAGAATTTCCTCGGCTGCT
CCATCGACAAGATGCACAAATTCCTTCACATCAAAGCTATAATTGGTAAA
CTTGGCGTGTGCGCCGCCCTCGGGATGATGACCCTCGTCCTGTGGGTACA
CCAAGTCCCGCTGCTCCCAAGTGCGGTAGCGAACGCCACGTAGGCGAGCC
AAGTCCTTGTAGCAATTCGGATCCTCGCAGTTGTACAGCTCAAAAATGCA
GGCCCAGTTGGGCAGGAAGAGCAAGTGCGTCAGGCCAGCGCCATGCATGC
CGATGAGTATGTCCGTGTTCCGTGTGATGGCCAACTGGTTGGTAAAGGGG
AGCCTTTCATAGGAAACACGCTGTACATCGTACTTATCGTTGGCCTCCAG
GGGGGCCAGCAGCTCGTCTTCATTCAGCACTTGCCGGTACTTTGTGCGAC
GCGATAGATATGTTATTCTGATCTTTTGCTGTGGCGGCTTGTAGGGAATC
TGCAGGCGGTGCAGAATGAACTCGGAGAAGGCGCGGAAGAGTCCACTATT
CGAGCAGCCTTGGATTATGGGTGTATTGTAGAATAAGCCAAAGATCATCC
TGGGCAGCAGCGGCAGCACAACGTTCTTGAAGCATACCCGCTTGCCCTCC
ACATCGCTGAGTGTCCATACTGGTCGTTGCGAGAAGGCCTTAAATGTGTC
CCTGAAGGGCGAATCGTACGGATAGGTCTCCCATATAAGTATCTGCACAT
CCGTGTTGAAGGCCGCCGGATGCGACTGGTTGACAAAGAGCGAGGCATAC
A
BO07507.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:04:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9867-PA | 1563 | CG9867-RA | 728..1560 | 851..19 | 4165 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:36:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-RA | 1869 | CG9867-RA | 965..1797 | 851..19 | 4165 | 100 | Minus |
Eogt-RB | 1806 | CG9867-RB | 902..1734 | 851..19 | 4165 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:36:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2382615..2383001 | 405..19 | 1935 | 100 | Minus |
2L | 23513712 | 2L | 2382061..2382296 | 851..616 | 1180 | 100 | Minus |
2L | 23513712 | 2L | 2382349..2382561 | 615..403 | 1065 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 19:36:20 has no hits.
BO07507.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:20:41 Download gff for
BO07507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-PA | 729..1563 | 18..850 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:45 Download gff for
BO07507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-PA | 729..1563 | 18..850 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:09:26 Download gff for
BO07507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 903..1740 | 11..850 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:20:29 Download gff for
BO07507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 903..1740 | 11..850 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:20:29 Download gff for
BO07507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2382062..2382296 | 616..850 | 100 | -> | Minus |
2L | 2382349..2382560 | 404..615 | 100 | -> | Minus |
2L | 2382617..2383007 | 11..403 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:09:26 Download gff for
BO07507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2382062..2382296 | 616..850 | 100 | -> | Minus |
arm_2L | 2382349..2382560 | 404..615 | 100 | -> | Minus |
arm_2L | 2382617..2383007 | 11..403 | 98 | | Minus |
BO07507.5prime Sequence
898 bp (814 high quality bases) assembled on 2006-01-06
> BO07507.5prime
GAAGTTATCAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTAC
ACTTGTCCCTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCC
AGCCTGCCGTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCT
GAAACAACAGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCG
CCTGCTGGGGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACG
CCCCAGTGCCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACA
GGTTAGGACCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGC
TCTCCCAACTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCG
CTAGAGTGCACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTT
CGACTTTCGGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGG
ATGTGCTGGGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACT
CGACTGTCGGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGG
TCCGGAGTTGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCG
GTCTCTGCGATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGAT
GCCACGTACAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGC
CTCGCTCTTTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGC
AGATACTTATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGGACACA
TTTAAGGCCTTCTCGCAACGACCAGTATGAACACTCAGCGATGTGGAA
BO07507.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:04:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9867-PA | 1563 | CG9867-RA | 1..881 | 17..897 | 4380 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:44:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-RA | 1869 | CG9867-RA | 238..1118 | 17..897 | 4390 | 99.9 | Plus |
Eogt-RB | 1806 | CG9867-RB | 175..1055 | 17..897 | 4390 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:44:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2381334..2382214 | 17..897 | 4390 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-11 03:44:19 has no hits.
BO07507.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:20:42 Download gff for
BO07507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-PA | 1..880 | 17..896 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:47 Download gff for
BO07507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-PA | 1..880 | 17..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:56:08 Download gff for
BO07507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 175..1055 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:50:31 Download gff for
BO07507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 175..1055 | 17..898 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:50:31 Download gff for
BO07507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2381334..2382214 | 17..898 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:56:08 Download gff for
BO07507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2381334..2382214 | 17..898 | 99 | | Plus |
BO07507.complete Sequence
1594 bp (1594 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630817
> BO07507.complete
GAAGTTATCAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTAC
ACTTGTCCCTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCC
AGCCTGCCGTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCT
GAAACAACAGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCG
CCTGCTGGGGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACG
CCCCAGTGCCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACA
GGTTAGGACCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGC
TCTCCCAACTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCG
CTAGAGTGCACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTT
CGACTTTCGGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGG
ATGTGCTGGGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACT
CGACTGTCGGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGG
TCCGGAGTTGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCG
GTCTCTGCGATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGAT
GCCACGTACAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGC
CTCGCTCTTTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGC
AGATACTTATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGGACACA
TTTAAGGCCTTCTCGCAACGACCAGTATGGACACTCAGCGATGTGGAGGG
CAAGCGGGTATGCTTCAAGAACGTTGTGCTGCCGCTGCTGCCCAGGATGA
TCTTTGGCTTATTCTACAATACACCCATAATCCAAGGCTGCTCGAATAGT
GGACTCTTCCGCGCCTTCTCCGAGTTCATTCTGCACCGCCTGCAGATTCC
CTACAAGCCGCCACAGCAAAAGATCAGAATAACATATCTATCGCGTCGCA
CAAAGTACCGGCAAGTGCTGAATGAAGACGAGCTGCTGGCCCCCCTGGAG
GCCAACGATAAGTACGATGTACAGCGTGTTTCCTATGAAAGGCTCCCCTT
TACCAACCAGTTGGCCATCACACGGAACACGGACATACTCATCGGCATGC
ATGGCGCTGGCCTGACGCACTTGCTCTTCCTGCCCAACTGGGCCTGCATT
TTTGAGCTGTACAACTGCGAGGATCCGAATTGCTACAAGGACTTGGCTCG
CCTACGTGGCGTTCGCTACCGCACTTGGGAGCAGCGGGACTTGGTGTACC
CACAGGACGAGGGTCATCATCCCGAGGGCGGCGCACACGCCAAGTTTACC
AATTATAGCTTTGATGTGAAGGAATTTGTGCATCTTGTCGATGGAGCAGC
CGAGGAAATTCTTTCCCACAAGGAATTCCCCCGACGGGCATCAGAAAATC
CCTCCAAAACGCAGCGCAACGAGCTGGCAAGCTTTCTAGACCAT
BO07507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:04:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-RA | 1563 | CG9867-PA | 1..1560 | 17..1576 | 7800 | 100 | Plus |
Eogt-RB | 1563 | CG9867-PB | 1..1560 | 17..1576 | 7800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-RA | 1869 | CG9867-RA | 238..1797 | 17..1576 | 7800 | 100 | Plus |
Eogt-RB | 1806 | CG9867-RB | 175..1734 | 17..1576 | 7800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2381334..2382296 | 17..979 | 4815 | 100 | Plus |
2L | 23513712 | 2L | 2382615..2383001 | 1190..1576 | 1935 | 100 | Plus |
2L | 23513712 | 2L | 2382349..2382561 | 980..1192 | 1065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:04:05 has no hits.
BO07507.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:16:04 Download gff for
BO07507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-RA | 1..1563 | 17..1577 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:37:57 Download gff for
BO07507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-RA | 195..1760 | 17..1584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:57 Download gff for
BO07507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 175..1734 | 17..1578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:16:05 Download gff for
BO07507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9867-RA | 195..1760 | 17..1584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:17:42 Download gff for
BO07507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eogt-RB | 175..1734 | 17..1578 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:17:42 Download gff for
BO07507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2381334..2382296 | 17..979 | 100 | -> | Plus |
2L | 2382349..2382560 | 980..1191 | 100 | -> | Plus |
2L | 2382617..2383001 | 1192..1578 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:57 Download gff for
BO07507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2381334..2382296 | 17..979 | 100 | -> | Plus |
arm_2L | 2382349..2382560 | 980..1191 | 100 | -> | Plus |
arm_2L | 2382617..2383001 | 1192..1578 | 99 | | Plus |
BO07507.pep Sequence
Translation from 16 to 1594
> BO07507.pep
MPILPILIGILHLSLAEDAKHLDGFSLPSLPSEHLIRYLNTFPKLKQQLP
TNLTGKGTISSACWGHERDCTPAGRFQTPQCPGEHTGWARSKEAQVRTFY
NQADFGYIQEQLSQLTPQCVPTYLGDSSLECTHYLRFCRGRNLLFDFRGL
EQREERIRYHMDVLGPGQLLGHCKLNRTRLSGEMEHIGSALQSWGPELRN
FDVLPHPVLESGLCDVVVNTPTFIMKIDATYNMYHHFCDFFNLYASLFVN
QSHPAAFNTDVQILIWETYPYDSPFRDTFKAFSQRPVWTLSDVEGKRVCF
KNVVLPLLPRMIFGLFYNTPIIQGCSNSGLFRAFSEFILHRLQIPYKPPQ
QKIRITYLSRRTKYRQVLNEDELLAPLEANDKYDVQRVSYERLPFTNQLA
ITRNTDILIGMHGAGLTHLLFLPNWACIFELYNCEDPNCYKDLARLRGVR
YRTWEQRDLVYPQDEGHHPEGGAHAKFTNYSFDVKEFVHLVDGAAEEILS
HKEFPRRASENPSKTQRNELASFLDH
BO07507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:38:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eogt-PA | 520 | CG9867-PA | 1..520 | 1..520 | 2822 | 100 | Plus |
Eogt-PB | 520 | CG9867-PB | 1..520 | 1..520 | 2822 | 100 | Plus |