Clone BO07507 Report

Search the DGRC for BO07507

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:75
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG9867-RA
Protein status:BO07507.pep: validated full length
Sequenced Size:1594

Clone Sequence Records

BO07507.3prime Sequence

851 bp (807 high quality bases) assembled on 2006-01-06

> BO07507.3prime
ATGGTCTAGAAAGCTTGCCAGCTCGTTGCGCTGCGTTTTGGAGGGATTTT
CTGATGCCCGTCGGGGGAATTCCTTGTGGGAAAGAATTTCCTCGGCTGCT
CCATCGACAAGATGCACAAATTCCTTCACATCAAAGCTATAATTGGTAAA
CTTGGCGTGTGCGCCGCCCTCGGGATGATGACCCTCGTCCTGTGGGTACA
CCAAGTCCCGCTGCTCCCAAGTGCGGTAGCGAACGCCACGTAGGCGAGCC
AAGTCCTTGTAGCAATTCGGATCCTCGCAGTTGTACAGCTCAAAAATGCA
GGCCCAGTTGGGCAGGAAGAGCAAGTGCGTCAGGCCAGCGCCATGCATGC
CGATGAGTATGTCCGTGTTCCGTGTGATGGCCAACTGGTTGGTAAAGGGG
AGCCTTTCATAGGAAACACGCTGTACATCGTACTTATCGTTGGCCTCCAG
GGGGGCCAGCAGCTCGTCTTCATTCAGCACTTGCCGGTACTTTGTGCGAC
GCGATAGATATGTTATTCTGATCTTTTGCTGTGGCGGCTTGTAGGGAATC
TGCAGGCGGTGCAGAATGAACTCGGAGAAGGCGCGGAAGAGTCCACTATT
CGAGCAGCCTTGGATTATGGGTGTATTGTAGAATAAGCCAAAGATCATCC
TGGGCAGCAGCGGCAGCACAACGTTCTTGAAGCATACCCGCTTGCCCTCC
ACATCGCTGAGTGTCCATACTGGTCGTTGCGAGAAGGCCTTAAATGTGTC
CCTGAAGGGCGAATCGTACGGATAGGTCTCCCATATAAGTATCTGCACAT
CCGTGTTGAAGGCCGCCGGATGCGACTGGTTGACAAAGAGCGAGGCATAC
A

BO07507.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:04:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG9867-PA 1563 CG9867-RA 728..1560 851..19 4165 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:36:24
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-RA 1869 CG9867-RA 965..1797 851..19 4165 100 Minus
Eogt-RB 1806 CG9867-RB 902..1734 851..19 4165 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:36:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2382615..2383001 405..19 1935 100 Minus
2L 23513712 2L 2382061..2382296 851..616 1180 100 Minus
2L 23513712 2L 2382349..2382561 615..403 1065 100 Minus
Blast to na_te.dros performed on 2015-02-09 19:36:20 has no hits.

BO07507.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:20:41 Download gff for BO07507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9867-PA 729..1563 18..850 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:45 Download gff for BO07507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9867-PA 729..1563 18..850 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:09:26 Download gff for BO07507.3prime
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 903..1740 11..850 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:20:29 Download gff for BO07507.3prime
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 903..1740 11..850 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:20:29 Download gff for BO07507.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 2382062..2382296 616..850 100 -> Minus
2L 2382349..2382560 404..615 100 -> Minus
2L 2382617..2383007 11..403 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:09:26 Download gff for BO07507.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2382062..2382296 616..850 100 -> Minus
arm_2L 2382349..2382560 404..615 100 -> Minus
arm_2L 2382617..2383007 11..403 98   Minus

BO07507.5prime Sequence

898 bp (814 high quality bases) assembled on 2006-01-06

> BO07507.5prime
GAAGTTATCAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTAC
ACTTGTCCCTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCC
AGCCTGCCGTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCT
GAAACAACAGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCG
CCTGCTGGGGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACG
CCCCAGTGCCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACA
GGTTAGGACCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGC
TCTCCCAACTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCG
CTAGAGTGCACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTT
CGACTTTCGGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGG
ATGTGCTGGGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACT
CGACTGTCGGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGG
TCCGGAGTTGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCG
GTCTCTGCGATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGAT
GCCACGTACAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGC
CTCGCTCTTTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGC
AGATACTTATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGGACACA
TTTAAGGCCTTCTCGCAACGACCAGTATGAACACTCAGCGATGTGGAA

BO07507.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:04:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG9867-PA 1563 CG9867-RA 1..881 17..897 4380 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-RA 1869 CG9867-RA 238..1118 17..897 4390 99.9 Plus
Eogt-RB 1806 CG9867-RB 175..1055 17..897 4390 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2381334..2382214 17..897 4390 99.9 Plus
Blast to na_te.dros performed on 2015-02-11 03:44:19 has no hits.

BO07507.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:20:42 Download gff for BO07507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9867-PA 1..880 17..896 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:47 Download gff for BO07507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9867-PA 1..880 17..896 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:56:08 Download gff for BO07507.5prime
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 175..1055 17..898 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:50:31 Download gff for BO07507.5prime
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 175..1055 17..898 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:50:31 Download gff for BO07507.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2381334..2382214 17..898 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:56:08 Download gff for BO07507.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2381334..2382214 17..898 99   Plus

BO07507.complete Sequence

1594 bp (1594 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630817

> BO07507.complete
GAAGTTATCAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTAC
ACTTGTCCCTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCC
AGCCTGCCGTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCT
GAAACAACAGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCG
CCTGCTGGGGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACG
CCCCAGTGCCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACA
GGTTAGGACCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGC
TCTCCCAACTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCG
CTAGAGTGCACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTT
CGACTTTCGGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGG
ATGTGCTGGGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACT
CGACTGTCGGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGG
TCCGGAGTTGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCG
GTCTCTGCGATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGAT
GCCACGTACAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGC
CTCGCTCTTTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGC
AGATACTTATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGGACACA
TTTAAGGCCTTCTCGCAACGACCAGTATGGACACTCAGCGATGTGGAGGG
CAAGCGGGTATGCTTCAAGAACGTTGTGCTGCCGCTGCTGCCCAGGATGA
TCTTTGGCTTATTCTACAATACACCCATAATCCAAGGCTGCTCGAATAGT
GGACTCTTCCGCGCCTTCTCCGAGTTCATTCTGCACCGCCTGCAGATTCC
CTACAAGCCGCCACAGCAAAAGATCAGAATAACATATCTATCGCGTCGCA
CAAAGTACCGGCAAGTGCTGAATGAAGACGAGCTGCTGGCCCCCCTGGAG
GCCAACGATAAGTACGATGTACAGCGTGTTTCCTATGAAAGGCTCCCCTT
TACCAACCAGTTGGCCATCACACGGAACACGGACATACTCATCGGCATGC
ATGGCGCTGGCCTGACGCACTTGCTCTTCCTGCCCAACTGGGCCTGCATT
TTTGAGCTGTACAACTGCGAGGATCCGAATTGCTACAAGGACTTGGCTCG
CCTACGTGGCGTTCGCTACCGCACTTGGGAGCAGCGGGACTTGGTGTACC
CACAGGACGAGGGTCATCATCCCGAGGGCGGCGCACACGCCAAGTTTACC
AATTATAGCTTTGATGTGAAGGAATTTGTGCATCTTGTCGATGGAGCAGC
CGAGGAAATTCTTTCCCACAAGGAATTCCCCCGACGGGCATCAGAAAATC
CCTCCAAAACGCAGCGCAACGAGCTGGCAAGCTTTCTAGACCAT

BO07507.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:04:06
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-RA 1563 CG9867-PA 1..1560 17..1576 7800 100 Plus
Eogt-RB 1563 CG9867-PB 1..1560 17..1576 7800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:07
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-RA 1869 CG9867-RA 238..1797 17..1576 7800 100 Plus
Eogt-RB 1806 CG9867-RB 175..1734 17..1576 7800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2381334..2382296 17..979 4815 100 Plus
2L 23513712 2L 2382615..2383001 1190..1576 1935 100 Plus
2L 23513712 2L 2382349..2382561 980..1192 1065 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:04:05 has no hits.

BO07507.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:16:04 Download gff for BO07507.complete
Subject Subject Range Query Range Percent Splice Strand
CG9867-RA 1..1563 17..1577 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:37:57 Download gff for BO07507.complete
Subject Subject Range Query Range Percent Splice Strand
CG9867-RA 195..1760 17..1584 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:57 Download gff for BO07507.complete
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 175..1734 17..1578 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:16:05 Download gff for BO07507.complete
Subject Subject Range Query Range Percent Splice Strand
CG9867-RA 195..1760 17..1584 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:17:42 Download gff for BO07507.complete
Subject Subject Range Query Range Percent Splice Strand
Eogt-RB 175..1734 17..1578 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:17:42 Download gff for BO07507.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2381334..2382296 17..979 100 -> Plus
2L 2382349..2382560 980..1191 100 -> Plus
2L 2382617..2383001 1192..1578 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:57 Download gff for BO07507.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2381334..2382296 17..979 100 -> Plus
arm_2L 2382349..2382560 980..1191 100 -> Plus
arm_2L 2382617..2383001 1192..1578 99   Plus

BO07507.pep Sequence

Translation from 16 to 1594

> BO07507.pep
MPILPILIGILHLSLAEDAKHLDGFSLPSLPSEHLIRYLNTFPKLKQQLP
TNLTGKGTISSACWGHERDCTPAGRFQTPQCPGEHTGWARSKEAQVRTFY
NQADFGYIQEQLSQLTPQCVPTYLGDSSLECTHYLRFCRGRNLLFDFRGL
EQREERIRYHMDVLGPGQLLGHCKLNRTRLSGEMEHIGSALQSWGPELRN
FDVLPHPVLESGLCDVVVNTPTFIMKIDATYNMYHHFCDFFNLYASLFVN
QSHPAAFNTDVQILIWETYPYDSPFRDTFKAFSQRPVWTLSDVEGKRVCF
KNVVLPLLPRMIFGLFYNTPIIQGCSNSGLFRAFSEFILHRLQIPYKPPQ
QKIRITYLSRRTKYRQVLNEDELLAPLEANDKYDVQRVSYERLPFTNQLA
ITRNTDILIGMHGAGLTHLLFLPNWACIFELYNCEDPNCYKDLARLRGVR
YRTWEQRDLVYPQDEGHHPEGGAHAKFTNYSFDVKEFVHLVDGAAEEILS
HKEFPRRASENPSKTQRNELASFLDH

BO07507.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:38:46
Subject Length Description Subject Range Query Range Score Percent Strand
Eogt-PA 520 CG9867-PA 1..520 1..520 2822 100 Plus
Eogt-PB 520 CG9867-PB 1..520 1..520 2822 100 Plus