Clone Sequence Records
BO07510.3prime Sequence
482 bp (481 high quality bases) assembled on 2006-01-06
> BO07510.3prime
ATGGTCTAGAAAGCTTGCGATGATGATCTCGGTGTCGCCCAGATCCTCGT
CCGAGGGCAGTGTAATGCTGGCGGGGTCCACGTAGTTGGGGCTGACCAAA
TCCACGCCGGCCAGTTCGCGGCGACGCAGCTCCAAGAAGCCCTCACGCTG
GGCCCAGTTGCGGAACTGAGTGTCGGGCAGGTAGGCCCAGTAGAAGCTGC
CCCACACCAGGCACAGTGTCACCGTAACGAAGAACGTCGACTTGGTGGCC
TTGCGATCCTCCACCTGGTCCTTGTAGTCGAATCCGTAGCTCTGCCAGTT
CTTGGGACTCGGATTGGCAAAGTCCTCGGTCGTAAGTGAAGTGGGGGCCG
TGATGGTCTCATCCTTCTTCGGCGACGTGTTGATTGCCCGCACCACTGCC
GCCTGGTTGGCGACCAGGGAACGCTGCAGCGCCACGGCGCGGTTGGTCAG
ACGGAACAGCGCAGACATGTCGACTGATAACT
BO07510.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:04:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6008-PA | 453 | NP15.6-RA | 1..450 | 468..19 | 2250 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:23:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-RA | 648 | CG6008-RA | 81..530 | 468..19 | 2250 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:23:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19027448..19027897 | 468..19 | 2250 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:23:28 has no hits.
BO07510.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:20:47 Download gff for
BO07510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6008-PA | 1..453 | 15..468 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:54 Download gff for
BO07510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6008-PA | 1..453 | 15..468 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:43:31 Download gff for
BO07510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 93..554 | 10..472 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:10:18 Download gff for
BO07510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 77..538 | 10..472 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:10:18 Download gff for
BO07510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19027444..19027905 | 10..472 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:43:31 Download gff for
BO07510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14853166..14853627 | 10..472 | 98 | | Minus |
BO07510.5prime Sequence
482 bp (481 high quality bases) assembled on 2006-01-06
> BO07510.5prime
GAAATTATCAATCGACATGTCTGCGCTGTTCCGTCTGACCAACCGCGCCG
TGGCGCTGCAGCGTTCCCTGGTCGCCAACCAGGCGGCAGTGGTGCGGGCA
ATCAACACGTCGCCGAAGAAGGATGAGACCATCACGGCCCCCACTTCACT
TACGACCGAGGACTTTGCCAATCCGAGTCCCAAGAACTGGCAGAGCTACG
GATTCGACTACAAGGACCAGGTGGAGGATCGCAAGGACACCAAGTCGACG
TTCTTCGTTACGGTGACACTGTGCCTGGTGTGGGGCAGCTTCTACTGGGC
CTACCTGCCCGACACTCAGTTCCGCAACTGGGCCCAGCGTGAGGGCTTCT
TGGAGCTGCGTCGCCGCGAACTGGCCGGCGTGGATTTGGTCAGCCCCAAC
TACGTGGACCCCGCCAGCATTACACTGCCCTCGGACGAGGATCTGGGCGA
CACCGAGATCATCATCGCAAGCTTTCTAGACC
BO07510.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6008-PA | 453 | NP15.6-RA | 1..450 | 17..466 | 2225 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 21:58:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-RA | 648 | CG6008-RA | 81..530 | 17..466 | 2235 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 21:58:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19027448..19027897 | 17..466 | 2235 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 21:58:29 has no hits.
BO07510.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:20:49 Download gff for
BO07510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6008-PA | 1..453 | 17..470 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:56 Download gff for
BO07510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6008-PA | 1..453 | 17..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:45:44 Download gff for
BO07510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 90..554 | 9..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:50:48 Download gff for
BO07510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 74..538 | 9..475 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:50:48 Download gff for
BO07510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19027441..19027905 | 9..475 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:45:44 Download gff for
BO07510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14853163..14853627 | 9..475 | 98 | | Plus |
BO07510.complete Sequence
484 bp (484 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630819
> BO07510.complete
GAAGTTATCAGTCGACATGTCTGCGCTGTTCCGTCTGACCAACCGCGCCG
TGGCGCTGCAGCGTTCCCTGGTCGCCAACCAGGCGGCAGTGGTGCGGGCA
ATCAACACGTCGCCGAAGAAGGATGAGACCATCACGGCCCCCACTTCACT
TACGACCGAGGACTTTGCCAATCCGAGTCCCAAGAACTGGCAGAGCTACG
GATTCGACTACAAGGACCAGGTGGAGGATCGCAAGGCCACCAAGTCGACG
TTCTTCGTTACGGTGACACTGTGCCTGGTGTGGGGCAGCTTCTACTGGGC
CTACCTGCCCGACACTCAGTTCCGCAACTGGGCCCAGCGTGAGGGCTTCT
TGGAGCTGCGTCGCCGCGAACTGGCCGGCGTGGATTTGGTCAGCCCCAAC
TACGTGGACCCCGCCAGCATTACACTGCCCTCGGACGAGGATCTGGGCGA
CACCGAGATCATCATCGCAAGCTTTCTAGACCAT
BO07510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:01:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-RA | 453 | CG6008-PA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:01:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-RA | 648 | CG6008-RA | 81..530 | 17..466 | 2250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:01:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19027448..19027897 | 17..466 | 2250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:01:37 has no hits.
BO07510.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:08:52 Download gff for
BO07510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 1..453 | 17..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:25:44 Download gff for
BO07510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 93..554 | 13..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:43:54 Download gff for
BO07510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 97..546 | 17..468 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:08:52 Download gff for
BO07510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 93..554 | 13..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:13:01 Download gff for
BO07510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 81..530 | 17..468 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:13:01 Download gff for
BO07510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19027448..19027897 | 17..468 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:43:54 Download gff for
BO07510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14853170..14853619 | 17..468 | 99 | | Plus |
BO07510.pep Sequence
Translation from 16 to 484
> BO07510.pep
MSALFRLTNRAVALQRSLVANQAAVVRAINTSPKKDETITAPTSLTTEDF
ANPSPKNWQSYGFDYKDQVEDRKATKSTFFVTVTLCLVWGSFYWAYLPDT
QFRNWAQREGFLELRRRELAGVDLVSPNYVDPASITLPSDEDLGDTEIII
ASFLDH
BO07510.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-PA | 150 | CG6008-PA | 1..150 | 1..150 | 779 | 100 | Plus |
