Clone Sequence Records
BO07536.3prime Sequence
888 bp (781 high quality bases) assembled on 2006-01-06
> BO07536.3prime
ATGGTCTAGAAAGCTTGCGTACGGGTCGGAATCTTCCTCGCTGTCGCTAT
CGCCATCCGCCCACACAATGGGCCACACGGCGTTGCGCGAGCAGCTGCCG
CCTAAGGCCTTGCAGAACGTGTTAAAGGTGCTGGCCTGGGTAAAGCCGAG
GATCTCGCGCTCCTCGTAGATGCGGTACGTGAAGGTGCTCTCGTAGGTGC
CCACAAAGTAGCGGGCGTAGGCGCAGACCAGCTGGTCCACCACCGCCACG
CCCCCATCCTTCAGCTCCCTTCGTTGGACATTCGACTCCGGCGCGAAGTG
CACGAGGCGGAAGCGGTAGAAGAGCTCCTTTAGTTCCATCAGCTCGTATG
GCGTGGCGTCAGTGGCCAGGAACACTGTGGTCATGTTAAACCCGCGCAGC
AGCTGCTTGACCTGCTGGGCAGCCGCCTTCAGGGTGGGAGTGGTCGCATC
CCGCGAGCGAACAAAGTCGCCCCGCCTTAGGTGGGCGCAGAGGTAATCGC
CGCCCTTGGCGTTGCGCTTCGGCCGCTCCAGCTCCCACATGGCGGGCCGT
TGGACACCGGCCGAAGCATCTGTGGTGTCCAGGGCCTGCCGTCGGAAGTC
GGCGGCCACCTGTTCGAGCCGACGGGCGAAACGCATGGAACGCCGGGCCT
GCCAAAAGTGCTCGTCGCCCCAGTGGTCGTGAAGCACCGTTTCGGCGCTG
AGCAAAGCGTACGTGCGCATGTCGTCGACGTCCTCCGGTCCCGCCGTGTC
CTCGTCGATCGCCTCGCGAAGCAACTTCTCCAGCAGTCCGGCGCTGCCCT
GGAACCGAACGCAGTGGAAACGCCCCACGCGCAGCTTCGCCTGCTGCAGC
AATGGTCCTCCCGAAAGGGATCCCTCGCTGCACGGCTT
BO07536.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14789-PA | 1473 | O-fut2-RA | 601..1470 | 888..19 | 4300 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:24:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-RA | 1634 | CG14789-RA | 618..1487 | 888..19 | 4320 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:24:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1464510..1465379 | 19..888 | 4320 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:24:34 has no hits.
BO07536.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:21:36 Download gff for
BO07536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14789-PA | 601..1473 | 16..888 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:05:04 Download gff for
BO07536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14789-PA | 601..1473 | 16..888 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:43:35 Download gff for
BO07536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 618..1487 | 19..888 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:13:07 Download gff for
BO07536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 618..1487 | 19..888 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:13:07 Download gff for
BO07536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1464510..1465379 | 19..888 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:43:35 Download gff for
BO07536.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1358543..1359412 | 19..888 | 99 | | Plus |
BO07536.5prime Sequence
863 bp (809 high quality bases) assembled on 2006-01-06
> BO07536.5prime
GAAGTTATCAGTCGACATGCGAGGGAGCTGGCCCAGGCTTGGGTTCCCGG
CGCTGCTCCTGCTCCTCCATCTGCTGACCGGCTCGGATGCCGCCGTCCGG
AATGGGACTGCAAAGCGGGAAATTGGCGATTCCCGGGGAAGCAGCGGCAC
CTGCGTCAAAGGGTTCCTGCAGGAGATCCTGCCACTGCCAGCGACTTGTC
CGCCTGAGGTGCTCGGGATGAGGGGCGCCGTGTATATCCTTTACGACGTA
AACATCTCCGAGGGCTTCAACCTGCGCCGAGACGTCTATATTCGCATGGC
GGTGTTCGTGCGCCGGCTGCAGAGGAGAAGGCGCTTTCGCCATGTGCGCC
TTGTGCTGCCGCCGTGGCCCCGCCTCTACCACTGGCACTCGCAGGGCCTG
CAGCAATCTGGACTGCCCTGGAGCCACTTCTTCGACTTGGCCAGTCTGCG
TCGCTACGCGCCCGTTCTGGACTACGAGGAATTCCTGGCCGAACAGCGCT
TATTCGGCAATCCTGGCGCACCGCTGGTCCATGTAGGGCACGCTTTCCGG
TTGCAGCACTACGAGGTCATGCTAGAACAGGGCATATTTCGGGACAAGTT
CGAGCGCGTCACGGACAAGCCGTGCAGCGAGGGATCCCTGTCGGGAGGAC
CATTGCTGCAGCAGGCGGAGCTGCGCGTGGGGCGTTTCCACTGCGTTCGG
TTCCAGGGCAGCGCCGGACTGCTGGAGAAGTTGCTTCGCGAGGCGATCGA
CGAGGACACGGCGGGACCGGAGGACGTCGACGACATGCGCACGTACGCTT
TGCTCAGCGCCGAAACGGTGCTTCACGACCACTGGGGCGACGAGCACTTT
TGGCAGGCCCGGC
BO07536.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:04:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14789-PA | 1473 | O-fut2-RA | 1..847 | 17..863 | 4235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:37:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-RA | 1634 | CG14789-RA | 18..864 | 17..863 | 4235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:36:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1465133..1465979 | 863..17 | 4235 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 19:37:00 has no hits.
BO07536.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:21:37 Download gff for
BO07536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14789-PA | 1..847 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:05:05 Download gff for
BO07536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14789-PA | 1..847 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:09:30 Download gff for
BO07536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..864 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:20:34 Download gff for
BO07536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..864 | 17..863 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:20:34 Download gff for
BO07536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1465133..1465979 | 17..863 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:09:30 Download gff for
BO07536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1359166..1360012 | 17..863 | 100 | | Minus |
BO07536.complete Sequence
1504 bp (1504 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630829
> BO07536.complete
GAAGTTATCAGTCGACATGCGAGGGAGCTGGCCCAGGCTTGGGTTCCCGG
CGCTGCTCCTGCTCCTCCATCTGCTGACCGGCTCGGATGCCGCCGTCCGG
AATGGGACTGCAAAGCGGGAAATTGGCGATTCCCGGGGAAGCAGCGGCAC
CTGCGTCAAAGGGTTCCTGCAGGAGATCCTGCCACTGCCAGCGACTTGTC
CGCCTGAGGTGCTCGGGATGAGGGGCGCCGTGTATATCCTTTACGACGTA
AACATCTCCGAGGGCTTCAACCTGCGCCGAGACGTCTATATTCGCATGGC
GGTGTTCGTGCGCCGGCTGCAGAGGAGAAGGCGCTTTCGCCATGTGCGCC
TTGTGCTGCCGCCGTGGCCCCGCCTCTACCACTGGCACTCGCAGGGCCTG
CAGCAATCTGGACTGCCCTGGAGCCACTTCTTCGACTTGGCCAGTCTGCG
TCGCTACGCGCCCGTTCTGGACTACGAGGAATTCCTGGCCGAACAGCGCT
TATTCGGCAATCCTGGCGCACCGCTGGTCCATGTAGGGCACGCTTTCCGG
TTGCAGCACTACGAGGTCATGCTAGAACAGGGCATATTTCGGGACAAGTT
CGAGCGCGTCACGGACAAGCCGTGCAGCGAGGGATCCCTGTCGGGAGGAC
CATTGCTGCAGCAGGCGGAGCTGCGCGTGGGGCGTTTCCACTGCGTTCGG
TTCCAGGGCAGCGCCGGACTGCTGGAGAAGTTGCTTCGCGAGGCGATCGA
CGAGGACACGGCGGGACCGGAGGACGTCGACGACATGCGCACGTACGCTT
TGCTCAGCGCCGAAACGGTGCTTCACGACCACTGGGGCGACGAGCACTTT
TGGCAGGCCCGGCGTTCCATGCGTTTCGCCCGTCGGCTCGAACAGGTGGC
CGCCGACTTCCGACGGCAGGCCCTGGACACCACAGATGCTTCGGCCGGTG
TCCAACGGCCCGCCATGTGGGAGCTGGAGCGGCCGAAGCGCAACGCCAAG
GGCGGCGATTACCTCTGCGCCCACCTAAGGCGGGGCGACTTTGTTCGCTC
GCGGGATGCGACCACTCCCACCCTGAAGGCGGCTGCCCAGCAGGTCAAGC
AGCTGCTGCGCGGGTTTAACATGACCACAGTGTTCCTGGCCACTGACGCC
ACGCCATACGAGCTGATGGAACTAAAGGAGCTCTTCTACCGCTTCCGCCT
CGTGCACTTCGCGCCGGAGTCGAATGTCCAACGAAGGGAGCTGAAGGATG
GGGGCGTGGCGGTGGTGGACCAGCTGGTCTGCGCCTACGCCCGCTACTTT
GTGGGCACCTACGAGAGCACCTTCACGTACCGCATCTACGAGGAGCGCGA
GATCCTCGGCTTTACCCAGGCCAGCACCTTTAACACGTTCTGCAAGGCCT
TAGGCGGCAGCTGCTCGCGCAACGCCGTGTGGCCCATTGTGTGGGCGGAT
GGCGATAGCGACAGCGAGGAAGATTCCGACCCGTACGCAAGCTTTCTAGA
CCAT
BO07536.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-RA | 1473 | CG14789-PA | 1..1470 | 17..1486 | 7350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:34:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-RA | 1634 | CG14789-RA | 18..1487 | 17..1486 | 7350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:34:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1464510..1465979 | 1486..17 | 7350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:34:08 has no hits.
BO07536.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:49 Download gff for
BO07536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 1..1473 | 17..1489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:37:41 Download gff for
BO07536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 454..1923 | 17..1486 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:27:11 Download gff for
BO07536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..1487 | 17..1488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:49 Download gff for
BO07536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 454..1923 | 17..1486 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:34:06 Download gff for
BO07536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..1487 | 17..1488 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:34:06 Download gff for
BO07536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1464507..1465979 | 17..1488 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:27:11 Download gff for
BO07536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1358540..1360012 | 17..1488 | 99 | | Minus |
BO07536.pep Sequence
Translation from 16 to 1504
> BO07536.pep
MRGSWPRLGFPALLLLLHLLTGSDAAVRNGTAKREIGDSRGSSGTCVKGF
LQEILPLPATCPPEVLGMRGAVYILYDVNISEGFNLRRDVYIRMAVFVRR
LQRRRRFRHVRLVLPPWPRLYHWHSQGLQQSGLPWSHFFDLASLRRYAPV
LDYEEFLAEQRLFGNPGAPLVHVGHAFRLQHYEVMLEQGIFRDKFERVTD
KPCSEGSLSGGPLLQQAELRVGRFHCVRFQGSAGLLEKLLREAIDEDTAG
PEDVDDMRTYALLSAETVLHDHWGDEHFWQARRSMRFARRLEQVAADFRR
QALDTTDASAGVQRPAMWELERPKRNAKGGDYLCAHLRRGDFVRSRDATT
PTLKAAAQQVKQLLRGFNMTTVFLATDATPYELMELKELFYRFRLVHFAP
ESNVQRRELKDGGVAVVDQLVCAYARYFVGTYESTFTYRIYEEREILGFT
QASTFNTFCKALGGSCSRNAVWPIVWADGDSDSEEDSDPYASFLDH
BO07536.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:39:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-PA | 490 | CG14789-PA | 1..490 | 1..490 | 2594 | 100 | Plus |
