Clone BO07567 Report

Search the DGRC for BO07567

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:75
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG10562-RA
Protein status:BO07567.pep: validated full length
Sequenced Size:1249

Clone Sequence Records

BO07567.3prime Sequence

965 bp (860 high quality bases) assembled on 2006-01-06

> BO07567.3prime
ATGGTCTAGAAAGCTTGCGAGCTCCAAGGCGCCACGATTTAACAGCCAGG
GCATGACGGCTTGGATGTGTTTGCGGTAACGGGGACTGTTGTAGAGCTGC
ATCTGGAAGTCACTGCCACCTATGAAGTTTTCCAAACTAGCACTGTCCGT
GGGATCCAAAAGAACAGCAGACATTACACCAGTAGCGACCGTGTAGCCGA
AGTAGCCGTATTTGAACAGCGCCAAATGAATATCTCGCAGACTAGGAATG
GGTTTCGAGTATTTCAAAATCTTCAGGTGCTCCACCAGATTATCGTGATA
AATTTTAATATAATAATCGAATTTGGCCAGTTTATCCTCCAGCTTTGTGG
ATGAGAGCAAGAAGTAGAGCAGATCCTGTGCCACGGTTCCGTACTTGGGC
AGCTGGTAGTCGACCAAATACACCTCCTTGATCTTTCCAAAGGCATCATA
CTGAAACATTATATTGTTTGACCACGAATCGCCGTGGTTCAGAACGTTGA
ACTCCGTTGGCTCGACCTTGGCGAACTCAAAAATCTTATCTATAGCAACA
GGCTGTAACGCTTTGACTTTGTCTAAATAAGCCTCATGACCTTCGTAGGT
GGCGCAGCTTTTAACGAAATTCGCGCCCATTCCTTTTATCATTTCAGACA
TAACGGGCCTGCTTTCCTCCTTAAAGAAGCCTTGAAGTAGGATTTTGGGA
TAGGGTCCTTTGGTGGCCACTCGTACAGCTGATGCAGCATGCCATTGGGA
TAGCTTTCGCAGAACCCTCTCCGTGTGCTCTTGATCCAGCCCTTCGAGGC
GGTTGGCATTCTTGAACCCTTTCAACCCCAAATCCTCCAGGGCCACGTAG
TCTGTCTTGGCATCTTGAGATCATAGTTTTTGGCGCCGAATGTGATGTCC
ACTCCTACTGCCTTGTAAAGCGCCTCTAGTTCAGGTACAACCTCGTTATA
CATGGTACGCTCGAT

BO07567.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG10562-PA 1218 CG10562-RA 371..1215 863..19 4225 100 Minus
CG10562-PA 1218 CG10562-RA 268..370 965..863 515 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:26:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG10562-RA 1527 CG10562-RA 347..1294 965..19 4715 99.9 Minus
CHKov1-RE 1463 CG10618-RE 349..1190 965..125 1030 75.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:26:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25321958..25322359 565..965 1960 99.8 Plus
3R 32079331 3R 25321522..25321889 197..564 1840 100 Plus
3R 32079331 3R 25321286..25321465 19..198 900 100 Plus
3R 32079331 3R 25323570..25323880 206..516 550 78.5 Plus
3R 32079331 3R 25323997..25324398 565..965 475 75.1 Plus
Blast to na_te.dros performed on 2015-02-04 20:26:33 has no hits.

BO07567.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:22:37 Download gff for BO07567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10562-PA 268..1218 18..965 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:06:26 Download gff for BO07567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10562-PA 268..1218 18..965 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:25:35 Download gff for BO07567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10562-RA 347..1294 19..965 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:49:41 Download gff for BO07567.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10562-RA 347..1294 19..965 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:49:41 Download gff for BO07567.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 25321286..25321464 19..197 100 <- Plus
3R 25321523..25321889 198..564 100 <- Plus
3R 25321958..25322359 565..965 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:25:35 Download gff for BO07567.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21147008..21147186 19..197 100 <- Plus
arm_3R 21147245..21147611 198..564 100 <- Plus
arm_3R 21147680..21148081 565..965 99   Plus

BO07567.5prime Sequence

866 bp (819 high quality bases) assembled on 2006-01-06

> BO07567.5prime
GAAGTTATCAGTCGACATGGCGTCCAGTAAAATCCCCGATTGGGTAACTG
CAGAAATATTTGAAGATTTGCTTAAGGCAAATGTGGATGGATACTCAAAA
ATTAAGAACTTTAAGGCGGACATTGGATCCGCTGCAGGTGAAAATTATGC
CACCATTATGCTTCGAGTCAAAATCGAAGTTGAGCTGCAGGATGGCAAAT
CGAAATCGGTATCCTACATGGTTAAGTTGCCCCACCAAGTGGAGGCTATT
CAGGAGATGATGAAACGAACCAACATCTTCGAAATCGAGCGTACCATGTA
TAACGAGGTTGTACCTGAACTAGAGGCGCTTTACAAGGCAGTAGGAGTGG
ACATCACATTCGGCGCCAAAAACTATGATCTCAAGAATGCCAAGACAGAC
TACGTGGCCCTGGAGGATTTGGGGTTGAAAGGGTTCAAGAATGCCAACCG
CCTCGAAGGGCTGGATCAAGAGCACACGGAGAGGGTTCTGCGAAAGCTAT
CCCAATGGCATGCTGCATCAGCTGTACGAGTGGCCACCAAAGGACCCTAT
CCCAAAATCCTACTTCAAGGCTTCTTTAAGGAGGAAAGCAGGCCCGTTAT
GTCTGAAATGATAAAAGGAATGGGCGCGAATTTCGTTAAAAGCTGCGCCA
CCTACGAAGGTCATGAGGCTTATTTAGACAAAGTCAAAGCGTTACAGCCT
GTTGCTATAGATAAGATTTTTGAGTTCGCCAAGGTCGAGCCAACGGAGTT
CAACGTTCTGAACCACGGCGATTCGTGGTCAAACAATATAATGTTTCAGT
ATGATGCCTTTGGAAAGATCAAGGAGGTGTATTTGGTCGACTACCAGCTG
CCCCAGTACGGAACCG

BO07567.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:05:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG10562-PA 1218 CG10562-RA 1..850 17..866 4225 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG10562-RA 1527 CG10562-RA 80..929 17..866 4235 99.9 Plus
CHKov1-RE 1463 CG10618-RE 94..907 29..842 1035 75.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25321958..25322452 685..191 2475 100 Minus
3R 32079331 3R 25321709..25321889 866..686 890 99.4 Minus
3R 32079331 3R 25322504..25322678 191..17 875 100 Minus
3R 32079331 3R 25323997..25324411 685..271 590 76.1 Minus
3R 32079331 3R 25323772..25323880 842..734 305 85.3 Minus
3R 32079331 3R 25329061..25329223 191..29 245 76.7 Minus
Blast to na_te.dros performed on 2015-02-10 15:40:48 has no hits.

BO07567.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:22:38 Download gff for BO07567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10562-PA 1..850 17..866 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:06:27 Download gff for BO07567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10562-PA 1..850 17..866 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:07:09 Download gff for BO07567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10562-RA 69..929 6..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:39 Download gff for BO07567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10562-RA 69..929 6..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:39 Download gff for BO07567.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25321709..25321889 686..866 99 <- Minus
3R 25321958..25322451 192..685 100 <- Minus
3R 25322504..25322689 6..191 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:07:09 Download gff for BO07567.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21147431..21147611 686..866 99 <- Minus
arm_3R 21147680..21148173 192..685 100 <- Minus
arm_3R 21148226..21148411 6..191 97   Minus

BO07567.complete Sequence

1249 bp (1249 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630843

> BO07567.complete
GAAGTTATCAGTCGACATGGCGTCCAGTAAAATCCCCGATTGGGTAACTG
CAGAAATATTTGAAGATTTGCTTAAGGCAAATGTGGATGGATACTCAAAA
ATTAAGAACTTTAAGGCGGACATTGGATCCGCTGCAGGTGAAAATTATGC
CACCATTATGCTTCGAGTCAAAATCGAAGTTGAGCTGCAGGATGGCAAAT
CGAAATCGGTATCCTACATGGTTAAGTTGCCCCACCAAGTGGAGGCTATT
CAGGAGATGATGAAACGAACCAACATCTTCGAAATCGAGCGTACCATGTA
TAACGAGGTTGTACCTGAACTAGAGGCGCTTTACAAGGCAGTAGGAGTGG
ACATCACATTCGGCGCCAAAAACTATGATCTCAAGAATGCCAAGACAGAC
TACGTGGCCCTGGAGGATTTGGGGTTGAAAGGGTTCAAGAATGCCAACCG
CCTCGAAGGGCTGGATCAAGAGCACACGGAGAGGGTTCTGCGAAAGCTAT
CCCAATGGCATGCTGCATCAGCTGTACGAGTGGCCACCAAAGGACCCTAT
CCCAAAATCCTACTTCAAGGCTTCTTTAAGGAGGAAAGCAGGCCCGTTAT
GTCTGAAATGATAAAAGGAATGGGCGCGAATTTCGTTAAAAGCTGCGCCA
CCTACGAAGGTCATGAGGCTTATTTAGACAAAGTCAAAGCGTTACAGCCT
GTTGCTATAGATAAGATTTTTGAGTTCGCCAAGGTCGAGCCAACGGAGTT
CAACGTTCTGAACCACGGCGATTCGTGGTCAAACAATATAATGTTTCAGT
ATGATGCCTTTGGAAAGATCAAGGAGGTGTATTTGGTCGACTACCAGCTG
CCCAAGTACGGAACCGTGGCACAGGATCTGCTCTACTTCTTGCTCTCATC
CACAAAGCTGGAGGATAAACTGGCCAAATTCGATTATTATATTAAAATTT
ATCACGATAATCTGGTGGAGCACCTGAAGATTTTGAAATACTCGAAACCC
ATTCCTAGTCTGCGAGATATTCATTTGGCGCTGTTCAAATACGGCTACTT
CGGCTACACGGTCGCTACTGGTGTAATGTCTGCTGTTCTTTTGGATCCCA
CGGACAGTGCTAGTTTGGAAAACTTCATAGGTGGCAGTGACTTCCAGATG
CAGCTCTACAACAGTCCCCGTTACCGCAAACACATCCAAGCCGTCATGCC
CTGGCTGTTAAATCGTGGCGCCTTGGAGCTCGCAAGCTTTCTAGACCAT

BO07567.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:16:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG10562-RA 1218 CG10562-PA 1..1215 17..1231 6075 100 Plus
CHKov1-RE 1233 CG10618-PE 13..1109 29..1125 1330 74.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:16:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10562-RA 1527 CG10562-RA 80..1294 17..1231 6075 100 Plus
CHKov1-RE 1463 CG10618-RE 94..1190 29..1125 1330 74.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:16:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25321958..25322452 685..191 2475 100 Minus
3R 32079331 3R 25321522..25321889 1053..686 1840 100 Minus
3R 32079331 3R 25321286..25321465 1231..1052 900 100 Minus
3R 32079331 3R 25322504..25322678 191..17 875 100 Minus
3R 32079331 3R 25323997..25324411 685..271 590 76.1 Minus
3R 32079331 3R 25323570..25323880 1044..734 550 78.5 Minus
3R 32079331 3R 25329061..25329223 191..29 245 76.7 Minus
Blast to na_te.dros performed on 2014-11-27 13:16:13 has no hits.

BO07567.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:19:23 Download gff for BO07567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10562-RA 1..1218 17..1232 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:08 Download gff for BO07567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10562-RA 63..1288 6..1231 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:28:22 Download gff for BO07567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10562-RA 80..1294 17..1233 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:19:23 Download gff for BO07567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10562-RA 63..1288 6..1231 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:14:32 Download gff for BO07567.complete
Subject Subject Range Query Range Percent Splice Strand
CG10562-RA 80..1294 17..1233 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:14:32 Download gff for BO07567.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25321284..25321464 1053..1233 98 <- Minus
3R 25321523..25321889 686..1052 100 <- Minus
3R 25321958..25322451 192..685 100 <- Minus
3R 25322504..25322678 17..191 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:28:22 Download gff for BO07567.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21147006..21147186 1053..1233 98 <- Minus
arm_3R 21147245..21147611 686..1052 100 <- Minus
arm_3R 21147680..21148173 192..685 100 <- Minus
arm_3R 21148226..21148400 17..191 100   Minus

BO07567.pep Sequence

Translation from 16 to 1249

> BO07567.pep
MASSKIPDWVTAEIFEDLLKANVDGYSKIKNFKADIGSAAGENYATIMLR
VKIEVELQDGKSKSVSYMVKLPHQVEAIQEMMKRTNIFEIERTMYNEVVP
ELEALYKAVGVDITFGAKNYDLKNAKTDYVALEDLGLKGFKNANRLEGLD
QEHTERVLRKLSQWHAASAVRVATKGPYPKILLQGFFKEESRPVMSEMIK
GMGANFVKSCATYEGHEAYLDKVKALQPVAIDKIFEFAKVEPTEFNVLNH
GDSWSNNIMFQYDAFGKIKEVYLVDYQLPKYGTVAQDLLYFLLSSTKLED
KLAKFDYYIKIYHDNLVEHLKILKYSKPIPSLRDIHLALFKYGYFGYTVA
TGVMSAVLLDPTDSASLENFIGGSDFQMQLYNSPRYRKHIQAVMPWLLNR
GALELASFLDH

BO07567.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:33:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG10562-PA 405 CG10562-PA 1..405 1..405 2089 100 Plus
CHKov1-PE 410 CG10618-PE 1..408 1..404 1670 75.2 Plus
CG10560-PA 414 CG10560-PA 17..414 6..404 1027 49.9 Plus
CG10553-PA 414 CG10553-PA 17..414 6..404 975 47.1 Plus
CG10559-PB 415 CG10559-PB 7..414 3..404 965 45.7 Plus