Clone BO07569 Report

Search the DGRC for BO07569

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:75
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG18284-RB
Protein status:BO07569.pep: validated full length
Sequenced Size:1405

Clone Sequence Records

BO07569.3prime Sequence

868 bp (792 high quality bases) assembled on 2006-01-06

> BO07569.3prime
ATGGTCTAGAAAGCTTGCACGATTAGAACCACAAAGACTTATTACACGAT
CGTAGACCAAGGATCGAACGTCCTTTGAGATCGTGAAGTCGAAGTGCGAG
AATCCTTCGAAGCGAATGTTCCTGTTTTCTATGCAGTTGGGCAGGTCCCG
CTCCAGTCGAAGGACATCCGATTCGGATCCCAACCAGTCGCCATCTCCGC
GGTGAAGAGCCACCTTGCCCAGTGCCAGGGAAAGGTTGTAAAGTGGGGGA
AAGATCGACTGGTAGCGTATCTTATTCAGAATTAGCCCGTAGTCGTACTT
TTGGAAAGCAGAATTGCCCTGCAATTGGGCGAAGTGATAGATCTGCTTGG
CGGAGCTTCCCTGCGAGGCGTGACCTTCCAAAATGGGGGATAGTGTCATA
TTGAAGCTGTTGAAGTTAAATCCGCACACCACAAATTCAAAGATGGCACA
GATGCGACTGGGGATAAGTTTGGTGCAGATGTGGTTACGGAACATGTCAA
CAATCTTGTTTTTCAGGGAGATCTTGTGGCCGCCCAAGAGATTCAACAAC
ATTGTGAAGCCACCCGAAAATAATTTCATAAACTTAAGTGCTGGACTGCG
TGTTCCTTCCATATAAACTGATGGCGAGAGGGACTGCATCAATGAGATCT
TGCCTGCATACTCAGGCCTTTCACTACACATCACAAAGAAGGCCGTGGAT
CCCTGCGAGTGACCAATGTACTGGATGCTCGGCATTTTAGTCTGCAGCAG
GATCAAGTCGATGGCAGCGGGTAGATCGTACTGCCCGATCTCGTGGAAGG
AGAAGTCCCAGAAGATCTTGTCGCTCTCCCGACCGGCCAGGCGCTCCTCC
CGAGTAACGTTTACCCTT

BO07569.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:05:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG18284-PA 1374 CG18284-RA 540..1371 850..19 4160 100 Minus
CG31872-PA 3222 CG31872-RA 2676..3200 565..41 2225 96.9 Minus
CG31872-PA 3222 CG31872-RA 2392..2667 849..574 1330 99.2 Minus
CG17097-PC 1239 CG17097-RC 435..461 811..785 135 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:51:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG18284-RB 1460 CG18284-RB 546..1395 868..19 4175 99.5 Minus
CG18284-RC 1539 CG18284-RC 546..1395 868..19 4175 99.5 Minus
CG31872-RB 3401 CG31872-RB 2407..3215 849..41 3700 97.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:51:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10645369..10645747 397..19 1895 100 Minus
2L 23513712 2L 10642997..10643353 397..41 1710 98.6 Minus
2L 23513712 2L 10644800..10645097 850..553 1490 100 Minus
2L 23513712 2L 10642420..10642716 849..553 1380 97.6 Minus
2L 23513712 2L 10645160..10645315 552..397 780 100 Minus
2L 23513712 2L 10642793..10642939 543..397 615 94.6 Minus
2L 23513712 2L 10649023..10649179 811..655 230 76.4 Minus
Blast to na_te.dros performed on 2015-02-13 01:51:15 has no hits.

BO07569.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:22:41 Download gff for BO07569.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18284-PA 522..1374 15..868 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:06:31 Download gff for BO07569.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18284-PA 522..1374 15..868 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:33:01 Download gff for BO07569.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18284-RC 546..1404 11..868 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:17:54 Download gff for BO07569.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18284-RC 546..1404 11..868 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:17:54 Download gff for BO07569.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10644782..10645097 553..868 98 -> Minus
2L 10645160..10645315 397..552 100 -> Minus
2L 10645370..10645756 11..396 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:33:01 Download gff for BO07569.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10644782..10645097 553..868 98 -> Minus
arm_2L 10645160..10645315 397..552 100 -> Minus
arm_2L 10645370..10645756 11..396 99   Minus

BO07569.5prime Sequence

875 bp (859 high quality bases) assembled on 2006-01-06

> BO07569.5prime
GAAGTTATCAGTCGACATGGCGATCGCATTTAATATTGCGATCTATGCAA
TAATTTTAGTGGGTAGTTTGGTACCCAGCAAGACTCAGGAATGGGTTCCA
TATGCATATCCTGTAGATGAAAATCAAGGATTGAATGAACAGACACAGTG
GCAGTCACAATCACAGATTCAGAGTCAAGGGACGTCACAATCACAAAGTC
AAGCTCAAATTCAATCACAGCCTGAACCAAGGTCATGTTTACAATGTCAA
CAAGCTAGTTACCAACAATTCTTTGCGGAGGTGGACATCCAGATCGACGC
CAAGCTGGAGACGCCCAAAATGATCTCAAAATATGGACATCAAGTAGAGA
CCCATTACGCATTCACTGCCGACGGCTACAAGCTCTGCCTGCATCGGATT
CCGCGGTCTGGAGCTACACCCGTCCTATTGGTCCATGGCCTGATGGCCAG
CTCGGCCACTTGGGTGCAGTTCGGTCCATCCCAGGGTCTGGCCTACATCC
TGTCCCAAAGCGGCTACGACGTCTGGATGTTGAACACAAGGGGTAACGTT
TACTCGGAGGAGCGCCTGGCCGGTCGGGAGAGCGACAAGATCTTCTGGGA
CTTCTCCTTCCACGAGATCGGGCAGTACGATCTACCCGCTGCCATCGACT
TGATCCTGCTGCAGACTAAAATGCCGAGCATCCAGTACATTGGTCACTCG
CAGGGATCCACGGCCTTCTTTGTGATGTGTAGTGAAAGGCCTGAGTATGC
AGGCAAGATCTCATTGATGCAGTCCCTCTCGCCATCAGTTTATATGGAAG
GAACACGCAGTCCAGCACTTAAGTTTATGAAATTATTTTCGGGTGGCTTC
ACAATGTTGTTGAAATCTCTTGGGC

BO07569.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:05:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG18284-PA 1374 CG18284-RA 1..848 17..864 4240 100 Plus
CG31872-PA 3222 CG31872-RA 2087..2667 252..832 2430 96.7 Plus
CG17097-PC 1239 CG17097-RC 435..461 595..621 135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:26:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG18284-RB 1460 CG18284-RB 21..882 13..875 4275 99.8 Plus
CG18284-RC 1539 CG18284-RC 21..882 13..875 4275 99.8 Plus
CG31872-RB 3401 CG31872-RB 2067..2724 217..875 2730 94.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:26:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10644557..10645097 313..853 2705 100 Plus
2L 23513712 2L 10642176..10642716 313..853 2465 97 Plus
2L 23513712 2L 10643991..10644150 13..172 785 99.4 Plus
2L 23513712 2L 10644340..10644485 168..313 730 100 Plus
2L 23513712 2L 10641997..10642093 217..313 245 83.5 Plus
2L 23513712 2L 10649023..10649179 595..751 230 76.4 Plus
Blast to na_te.dros performed on 2015-02-04 20:26:43 has no hits.

BO07569.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:22:42 Download gff for BO07569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18284-PA 1..858 17..875 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:06:32 Download gff for BO07569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18284-PA 1..858 17..875 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:25:37 Download gff for BO07569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18284-RC 21..882 13..875 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:49:47 Download gff for BO07569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18284-RC 21..882 13..875 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:49:47 Download gff for BO07569.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10643991..10644150 13..172 99 -> Plus
2L 10644345..10644485 173..313 100 -> Plus
2L 10644558..10645097 314..853 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:25:37 Download gff for BO07569.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10643991..10644150 13..172 99 -> Plus
arm_2L 10644345..10644485 173..313 100 -> Plus
arm_2L 10644558..10645097 314..853 100 -> Plus

BO07569.complete Sequence

1405 bp (1405 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630844

> BO07569.complete
GAAGTTATCAGTCGACATGGCGATCGCATTTAATATTGCGATCTATGCAA
TAATTTTAGTGGGTAGTTTGGTACCCAGCAAGACTCAGGAATGGGTTCCA
TATGCATATCCTGTAGATGAAAATCAAGGATTGAATGAACAGACACAGTG
GCAGTCACAATCACAGATTCAGAGTCAAGGGACGTCACAATCACAAAGTC
AAGCTCAAATTCAATCACAGCCTGAACCAAGGTCATGTTTACAATGTCAA
CAAGCTAGTTACCAACAATTCTTTGCGGAGGTGGACATCCAGATCGACGC
CAAGCTGGAGACGCCCAAAATGATCTCAAAATATGGACATCAAGTAGAGA
CCCATTACGCATTCACTGCCGACGGCTACAAGCTCTGCCTGCATCGGATT
CCGCGGTCTGGAGCTACACCCGTCCTATTGGTCCATGGCCTGATGGCCAG
CTCGGCCACTTGGGTGCAGTTCGGTCCATCCCAGGGTCTGGCCTACATCC
TGTCCCAAAGCGGCTACGACGTCTGGATGTTGAACACAAGGGGTAACGTT
TACTCGGAGGAGCGCCTGGCCGGTCGGGAGAGCGACAAGATCTTCTGGGA
CTTCTCCTTCCACGAGATCGGGCAGTACGATCTACCCGCTGCCATCGACT
TGATCCTGCTGCAGACTAAAATGCCGAGCATCCAGTACATTGGTCACTCG
CAGGGATCCACGGCCTTCTTTGTGATGTGTAGTGAAAGGCCTGAGTATGC
AGGCAAGATCTCATTGATGCAGTCCCTCTCGCCATCAGTTTATATGGAAG
GAACACGCAGTCCAGCACTTAAGTTTATGAAATTATTTTCGGGTGGCTTC
ACAATGTTGTTGAATCTCTTGGGCGGCCACAAGATCTCCCTGAAAAACAA
GATTGTTGACATGTTCCGTAACCACATCTGCACCAAACTTATCCCCAGTC
GCATCTGTGCCATCTTTGAATTTGTGGTGTGCGGATTTAACTTCAACAGC
TTCAATATGACACTATCCCCCATTTTGGAAGGTCACGCCTCGCAGGGAAG
CTCCGCCAAGCAGATCTATCACTTCGCCCAATTGCAGGGCAATTCTGCTT
TCCAAAAGTACGACTACGGGCTAATTCTGAATAAGATACGCTACCAGTCG
ATCTTTCCCCCACTTTACAACCTTTCCCTGGCACTGGGCAAGGTGGCTCT
TCACCGCGGAGATGGCGACTGGTTGGGATCCGAATCGGATGTCCTTCGAC
TGGAGCGGGACCTGCCCAACTGCATAGAAAACAGGAACATTCGCTTCGAA
GGATTCTCGCACTTCGACTTCACGATCTCAAAGGACGTTCGATCCTTGGT
CTACGATCGTGTAATAAGTCTTTGTGGTTCTAATCGTGCAAGCTTTCTAG
ACCAT

BO07569.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG18284-RB 1374 CG18284-PB 1..1371 17..1387 6855 100 Plus
CG18284-RC 1374 CG18284-PC 1..1371 17..1387 6855 100 Plus
CG31872-RB 3222 CG31872-PB 2052..3200 217..1365 5025 95.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG18284-RB 1460 CG18284-RB 21..1395 13..1387 6860 99.9 Plus
CG18284-RC 1539 CG18284-RC 21..1395 13..1387 6860 99.9 Plus
CG31872-RB 3401 CG31872-RB 2067..3215 217..1365 5025 95.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:28:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10644557..10645097 313..853 2705 100 Plus
2L 23513712 2L 10642176..10642716 313..853 2465 97 Plus
2L 23513712 2L 10645369..10645747 1009..1387 1895 100 Plus
2L 23513712 2L 10642997..10643353 1009..1365 1710 98.6 Plus
2L 23513712 2L 10643991..10644150 13..172 785 99.4 Plus
2L 23513712 2L 10645160..10645315 854..1009 780 100 Plus
2L 23513712 2L 10644340..10644485 168..313 730 100 Plus
2L 23513712 2L 10642793..10642939 863..1009 615 94.6 Plus
2L 23513712 2L 10641997..10642093 217..313 245 83.5 Plus
2L 23513712 2L 10649023..10649179 595..751 230 76.4 Plus
Blast to na_te.dros performed on 2014-11-27 16:28:27 has no hits.

BO07569.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:44 Download gff for BO07569.complete
Subject Subject Range Query Range Percent Splice Strand
CG18284-RA 1..1374 17..1391 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:37:34 Download gff for BO07569.complete
Subject Subject Range Query Range Percent Splice Strand
CG18284-RA 9..1392 13..1395 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:32 Download gff for BO07569.complete
Subject Subject Range Query Range Percent Splice Strand
CG18284-RC 25..1395 17..1389 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:44 Download gff for BO07569.complete
Subject Subject Range Query Range Percent Splice Strand
CG18284-RA 9..1392 13..1395 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:20 Download gff for BO07569.complete
Subject Subject Range Query Range Percent Splice Strand
CG18284-RC 25..1395 17..1389 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:19:20 Download gff for BO07569.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10643995..10644150 17..172 100 -> Plus
2L 10644345..10644485 173..313 100 -> Plus
2L 10644558..10645097 314..853 100 -> Plus
2L 10645160..10645315 854..1009 100 -> Plus
2L 10645370..10645747 1010..1389 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:32 Download gff for BO07569.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10643995..10644150 17..172 100 -> Plus
arm_2L 10644345..10644485 173..313 100 -> Plus
arm_2L 10644558..10645097 314..853 100 -> Plus
arm_2L 10645160..10645315 854..1009 100 -> Plus
arm_2L 10645370..10645747 1010..1389 99   Plus

BO07569.pep Sequence

Translation from 16 to 1405

> BO07569.pep
MAIAFNIAIYAIILVGSLVPSKTQEWVPYAYPVDENQGLNEQTQWQSQSQ
IQSQGTSQSQSQAQIQSQPEPRSCLQCQQASYQQFFAEVDIQIDAKLETP
KMISKYGHQVETHYAFTADGYKLCLHRIPRSGATPVLLVHGLMASSATWV
QFGPSQGLAYILSQSGYDVWMLNTRGNVYSEERLAGRESDKIFWDFSFHE
IGQYDLPAAIDLILLQTKMPSIQYIGHSQGSTAFFVMCSERPEYAGKISL
MQSLSPSVYMEGTRSPALKFMKLFSGGFTMLLNLLGGHKISLKNKIVDMF
RNHICTKLIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGSSAKQI
YHFAQLQGNSAFQKYDYGLILNKIRYQSIFPPLYNLSLALGKVALHRGDG
DWLGSESDVLRLERDLPNCIENRNIRFEGFSHFDFTISKDVRSLVYDRVI
SLCGSNRASFLDH

BO07569.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:42:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG18284-PB 457 CG18284-PB 1..457 1..457 2390 100 Plus
CG18284-PC 457 CG18284-PC 1..457 1..457 2390 100 Plus
CG31872-PB 1073 CG31872-PB 637..1073 39..456 2006 88.8 Plus
CG31872-PA 1073 CG31872-PA 637..1073 39..456 2006 88.8 Plus
CG17097-PB 1087 CG17097-PB 624..1078 39..450 1283 56.5 Plus