Clone BO07574 Report

Search the DGRC for BO07574

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:75
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG7148-RA
Protein status:BO07574.pep: validated full length
Sequenced Size:1396

Clone Sequence Records

BO07574.3prime Sequence

963 bp (902 high quality bases) assembled on 2006-01-06

> BO07574.3prime
ATGGTCTAGAAAGCTTGCGTGAAATTCAAATTGGTATCCGCGGTCCACAA
AGCTCAGACCGCGTTCCGAGTCGACTGGAAAGTCGGCGGTGAAGACAATA
TATCCTCTATATTCCAAAGAGCTCTTTAGGTTCGCTCTATCCACAAAGTC
CTCAAAGCCACTTAGGTCGTAGTAGAGCTTCAGAGGTGGCGAACGTCCAA
CTCCCGTCTTCTGCTTGAACGGCTCCCGCCGCTTAAGAATACTCAAGGCC
CGTGGCAAAAATGTTGGCGTCAGATTTCGGCAGTAGGACACGTCGAGGTG
TTCCAATCGTGGACAGAGTTCCACGAATTCTAAGAGGATTTCGTCGCTTA
GGTCATTCCAGTTGCGCACGCAGAGCAGCTGCAGCTCTGTCATACAGGTA
TAGCGCTTTAGGTAGTCTGCCGAATGAGTCCAGCTGCAAATGGCCAGGCG
CTTCAGCCTGCGATGCGTCCAGATGGGCAGCTTCTCATCCCAGCCCGGTT
CAAGGGGCATATAGTACCCGTCCACGGCAAAGCCGACGATGTCCTTGGCC
TTGAAAGCCATGATCTCGTAGAACTCGCTGACCTCGCGGATCTTGTGGTC
ATAGCTATCCGGACTGACCAGCGGGGGGATATGCCACTCGTTGTCCAGCA
GCACCACCAGTTTCCTGAGGGAGGGCAGCTCCAGAACGGCGGGTAGAATG
GGTTTCAAGGTGGCCAGATTGAGCTTAAGATCAGTGAGGTTCTTAAAGCT
CTGCANGCAGTTTCCCAGCTGAAGTTTACTGATCATATCGTACGTCCTAA
TGTCCAGGACCCGAAGATCGTGCAGCGTGCGGCACACCTCGTCCAGGTAC
TTCTGCTGCAGCTCAAACGCCTTGTGCTGGTCCTCGTAGAGGTGCAGCTC
CTGCANGTGCTGGAAGTTGGATAGGTACCGCCCGTCGATGGGTGTGGTAA
GGCGCACCTTTTT

BO07574.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:05:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-PA 1365 CG7148-RA 418..1362 963..19 4662 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:41:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-RA 1594 CG7148-RA 575..1519 963..19 4688 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:41:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21830790..21831487 133..830 3479 99.9 Plus
3L 28110227 3L 21831546..21831679 830..963 644 98.5 Plus
3L 28110227 3L 21830619..21830733 19..133 575 100 Plus
Blast to na_te.dros performed on 2015-02-10 15:41:34 has no hits.

BO07574.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:22:51 Download gff for BO07574.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-PA 418..1365 16..963 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:06:45 Download gff for BO07574.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-PA 418..1365 16..963 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:07:12 Download gff for BO07574.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 575..1525 12..963 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:52 Download gff for BO07574.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 575..1525 12..963 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:52 Download gff for BO07574.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 21830613..21830732 12..132 96 <- Plus
3L 21830790..21831486 133..829 99 <- Plus
3L 21831546..21831679 830..963 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:07:12 Download gff for BO07574.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21823713..21823832 12..132 96 <- Plus
arm_3L 21823890..21824586 133..829 99 <- Plus
arm_3L 21824646..21824779 830..963 98   Plus

BO07574.5prime Sequence

962 bp (841 high quality bases) assembled on 2006-01-06

> BO07574.5prime
GAAGTTATCAGTCGACATGGCTTCCGAGCCGAGATCCCTAATTCTGCAAT
TGGACGACGACTGTCTGGCCGAGATTTTCGATCGCTTGCAGGACCTGCCG
TCGGAAGTGTCCTTCGCGAGGACTTGCCGGCGAGTGCAGTACATATGTCT
GAGCAAGTGGCGCACCAGCCATGCCTACGAGCAACTGGATCTGGAGAAGT
GGCGGGTACTGTTGCCCAATCATGAAGACCTGGTCTACTTCCTAACCCAA
ATGCGTCCGTACATCAGAGAAATGGGCGGCAGCAGCTGTCTGTGCTCCAT
TCTAAAAGATCTGGACGAAATGCACATTGCAGAGCTGCCCATGGTGACCA
GCTTCTACTACGACCCAGACGGCGTCGATTGCTATCCCACGAACCGAAGC
ATCCGCAAGCTGGCCCGCCTGCTGCCGGGCTTGAAAAAGTTGCGCCTTAC
CACACCCATCGACGGGCGGTACCTATCCAACTTCCAGCACCTGCAGGAGC
TGCACCTCTACGAGGACCAGCACAAGGCGTTTGAGCTGCAGCAGAAGTAC
CTGGACGAGGTGTGCCGCACGCTGCACGATCTTCGGGTCCTGGACATTAG
GACGTACGATATGATCAGTAAACTTCAGCTGGGAAACTGCCTGCAGAGCT
TTAAGAACCTCACTGATCTTAAGCTCAATCTGGCCACCTTGAAACCCATT
CTACCCGCCGTTCTGGAGCTGCCCTCCCTCAGGAAACTGGTGGTGCTGCT
GGACAACGAGTGGCATATCCCCCCGCTGGTCAGTCCGGATAGCTATGACC
ACAAGATCCGCGAGGTCAGCGAGTTCTACGAGATCATGGCTTTTCAGGGC
CAGGACATCGTCGGCTTTGCCGTGGACGGGTACTATATGCCCCTTTGACC
CGGCTGGGATGAGAAGCTGCCCATCTGGACGCATCGCAGGCTGAAGCGCC
TGGCCTTTGCAG

BO07574.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:05:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-PA 1365 CG7148-RA 1..827 17..843 4135 100 Plus
CG7148-PA 1365 CG7148-RA 836..939 852..955 445 97.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:25:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-RA 1594 CG7148-RA 157..1104 16..962 4610 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21831546..21832097 567..16 2760 100 Minus
3L 28110227 3L 21831099..21831487 955..567 1840 98.2 Minus
Blast to na_te.dros performed on 2015-02-13 16:25:50 has no hits.

BO07574.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:22:52 Download gff for BO07574.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-PA 1..947 17..962 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:06:46 Download gff for BO07574.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-PA 1..947 17..962 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:12:01 Download gff for BO07574.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 157..1104 16..962 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:55:44 Download gff for BO07574.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 157..1104 16..962 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:55:44 Download gff for BO07574.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21831091..21831486 568..962 98 <- Minus
3L 21831546..21832097 16..567 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:12:01 Download gff for BO07574.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21824191..21824586 568..962 98 <- Minus
arm_3L 21824646..21825197 16..567 100 -> Minus

BO07574.complete Sequence

1396 bp (1396 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630846

> BO07574.complete
GAAGTTATCAGTCGACATGGCTTCCGAGCCGAGATCCCTAATTCTGCAAT
TGGACGACGACTGTCTGGCCGAGATTTTCGATCGCTTGCAGGACCTGCCG
TCGGAAGTGTCCTTCGCGAGGACTTGCCGGCGAGTGCAGTACATATGTCT
GAGCAAGTGGCGCACCAGCCATGCCTACGAGCAACTGGATCTGGAGAAGT
GGCGGGTACTGTTGCCCAATCATGAAGACCTGGTCTACTTCCTAACCCAA
ATGCGTCCGTACATCAGAGAAATGGGCGGCAGCAGCTGTCTGTGCTCCAT
TCTAAAAGATCTGGACGAAATGCACATTGCAGAGCTGCCCATGGTGACCA
GCTTCTACTACGACCCAGACGGCGTCGATTGCTATCCCACGAACCGAAGC
ATCCGCAAGCTGGCCCGCCTGCTGCCGGGCTTGAAAAAGTTGCGCCTTAC
CACACCCATCGACGGGCGGTACCTATCCAACTTCCAGCACCTGCAGGAGC
TGCACCTCTACGAGGACCAGCACAAGGCGTTTGAGCTGCAGCAGAAGTAC
CTGGACGAGGTGTGCCGCACGCTGCACGATCTTCGGGTCCTGGACATTAG
GACGTACGATATGATCAGTAAACTTCAGCTGGGAAACTGCCTGCAGAGCT
TTAAGAACCTCACTGATCTTAAGCTCAATCTGGCCACCTTGAAACCCATT
CTACCCGCCGTTCTGGAGCTGCCCTCCCTCAGGAAACTGGTGGTGCTGCT
GGACAACGAGTGGCATATCCCCCCGCTGGTCAGTCCGGATAGCTATGACC
ACAAGATCCGCGAGGTCAGCGAGTTCTACGAGATCATGGCTTTCAAGGCC
AAGGACATCGTCGGCTTTGCCGTGGACGGGTACTATATGCCCCTTGAACC
GGGCTGGGATGAGAAGCTGCCCATCTGGACGCATCGCAGGCTGAAGCGCC
TGGCCATTTGCAGCTGGACTCATTCGGCAGACTACCTAAAGCGCTATACC
TGTATGACAGAGCTGCAGCTGCTCTGCGTGCGCAACTGGAATGACCTAAG
CGACGAAATCCTCTTAGAATTCGTGGAACTCTGTCCACGATTGGAACACC
TCGACGTGTCCTACTGCCGAAATCTGACGCCAACATTTTTGCCACGGGCC
TTGAGTATTCTTAAGCGGCGGGAGCCGTTCAAGCAGAAGACGGGAGTTGG
ACGTTCGCCACCTCTGAAGCTCTACTACGACCTAAGTGGCTTTGAGGACT
TTGTGGATAGAGCGAACCTAAAGAGCTCTTTGGAATATAGAGGATATATT
GTCTTCACCGCCGACTTTCCAGTCGACTCGGAACGCGGTCTGAGCTTTGT
GGACCGCGGATACCAATTTGAATTTCACGCAAGCTTTCTAGACCAT

BO07574.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:33:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-RA 1365 CG7148-PA 1..1362 17..1378 6810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-RA 1594 CG7148-RA 157..1519 16..1378 6815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:33:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21830790..21831487 1264..567 3490 100 Minus
3L 28110227 3L 21831546..21832097 567..16 2760 100 Minus
3L 28110227 3L 21830619..21830733 1378..1264 575 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:33:26 has no hits.

BO07574.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:46 Download gff for BO07574.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1365 17..1381 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:37:38 Download gff for BO07574.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 109..1477 16..1385 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:03:54 Download gff for BO07574.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 158..1519 17..1380 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:47 Download gff for BO07574.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 109..1477 16..1385 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:21:57 Download gff for BO07574.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 158..1519 17..1380 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:21:57 Download gff for BO07574.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21830615..21830732 1265..1380 98 <- Minus
3L 21830790..21831486 568..1264 100 <- Minus
3L 21831546..21832096 17..567 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:03:54 Download gff for BO07574.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21823715..21823832 1265..1380 98 <- Minus
arm_3L 21823890..21824586 568..1264 100 <- Minus
arm_3L 21824646..21825196 17..567 100   Minus

BO07574.pep Sequence

Translation from 16 to 1396

> BO07574.pep
MASEPRSLILQLDDDCLAEIFDRLQDLPSEVSFARTCRRVQYICLSKWRT
SHAYEQLDLEKWRVLLPNHEDLVYFLTQMRPYIREMGGSSCLCSILKDLD
EMHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKKLRLTTPIDG
RYLSNFQHLQELHLYEDQHKAFELQQKYLDEVCRTLHDLRVLDIRTYDMI
SKLQLGNCLQSFKNLTDLKLNLATLKPILPAVLELPSLRKLVVLLDNEWH
IPPLVSPDSYDHKIREVSEFYEIMAFKAKDIVGFAVDGYYMPLEPGWDEK
LPIWTHRRLKRLAICSWTHSADYLKRYTCMTELQLLCVRNWNDLSDEILL
EFVELCPRLEHLDVSYCRNLTPTFLPRALSILKRREPFKQKTGVGRSPPL
KLYYDLSGFEDFVDRANLKSSLEYRGYIVFTADFPVDSERGLSFVDRGYQ
FEFHASFLDH

BO07574.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:39:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-PA 454 CG7148-PA 1..454 1..454 2419 100 Plus
CG14317-PA 448 CG14317-PA 43..374 19..362 247 25.2 Plus