Clone Sequence Records
BO07575.3prime Sequence
901 bp (789 high quality bases) assembled on 2006-01-06
> BO07575.3prime
ATGGTCTAGAAAGCTTGCGTTTGTTTTGACGGCTGCTCTCAGCTTGGCGG
ATCGACTGCGTGTGTTCCTCGCCACCTCGTCGGCGTCTGGCACAATGACA
TGGCGATGTAGTTGTTTCCAGCTCTTCTTGGTCAGTGATTCTAGTATATC
TGGCTCGTCTATTGCATAATGGCTGGAGTACTTGAGGGGAAGAGCATTGG
CGGCGCCTGCCAGGACGTTTCCGTTGATGTGACGCTTCACGATAGTGTCC
TCCAGCGAGTGGAAGGTAATGGTCACCAAGCGTCCATCCACACGGAGGAT
TTCGTTGGCCAAAACCATACCGTAGTTGATCTCGTTTAGTTCGTTGTTCA
CAAATATGCGGATGGCTTGGAAGGTCTTGGTGGCTGAGTGTGCCGGTCGT
CGAAGCTTATCCTTCCTGGTCCCGCCATCCATGATGTTTTCAATTATATC
TGCCAGCTGCTTGGTGGTCTCGATTTTAAAGAGGGCGTTGCGCGCGTCTA
CCAGTCCTCTGGCTATCTTCTTGGCTGCTTTCTCTTCACCATACATCCTT
AAAATCTTCACAAGGTCGCCCTCTTCAACATTAGCCAACACATCGGCAGC
TGTAACCCCTCCGCTGTGGCCACCATCCATTCGCATGTCCAGTGGACCGT
CCCTCGAGATGGAGAAGCCTCTGACCGCCTCATCGAATTGCATGGAACTG
CAACCAAAATCAAAAAGCATCCCGTCCACCGAGTTCTTGGCCAGGCCATG
TTCTTTGAAAAGCTTTGGTAAATCGGAGAATTTTCCAAGCAGGGGAATCA
GCCTACCCTTGAACTCTTCGGATTCGCTCATATCGCGGGCCAGTTGGTGG
GCCAATGGATCTCGATCTAGGGCGTATACCTTTGCCTCGGGACACTTCTC
C
BO07575.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-PA | 1071 | CG14683-RA | 186..1068 | 901..19 | 4415 | 100 | Minus |
| CG14683-PB | 1071 | CG14683-RB | 186..1068 | 901..19 | 4415 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:07:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1507 | CG14683-RA | 590..1472 | 901..19 | 4415 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:07:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10698059..10698941 | 901..19 | 4415 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 13:07:40 has no hits.
BO07575.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:22:53 Download gff for
BO07575.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-PA | 186..1071 | 15..901 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:06:48 Download gff for
BO07575.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-PB | 186..1071 | 15..901 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:06:41 Download gff for
BO07575.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 590..1475 | 15..901 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:29:42 Download gff for
BO07575.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 590..1475 | 15..901 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:29:42 Download gff for
BO07575.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10698059..10698944 | 15..901 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:06:41 Download gff for
BO07575.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6523781..6524666 | 15..901 | 99 | | Minus |
BO07575.5prime Sequence
890 bp (879 high quality bases) assembled on 2006-01-06
> BO07575.5prime
GAAGTTATCAGTCGACATGAAGCGACTCCTAAACCCTACTAGACTGAGAC
TGGATTGGTTGAGACGAAGCTCTATAGATGTGACGACTGCTCCCCATGTT
CCTGTGCTCTGCGACACCGCCATTGAATACCTGCAGCCCGTTCCAGGAGG
CACCTACTTCGACATGACTTTCGGAGCTGGTGGCCACACGCGGCGTCTTC
TGGAGAAGTGTCCCGAGGCAAAGGTATACGCCCTAGATCGAGATCCATTG
GCCCACCAACTGGCCCGCGATATGAGCGAATCCGAAGAGTTCAAGGGTAG
GCTGATTCCCCTGCTTGGAAAATTCTCCGATTTACCAAAGCTTTTCAAAG
AACATGGCCTGGCCAAGAACTCGGTGGACGGGATGCTTTTTGATTTTGGT
TGCAGTTCCATGCAATTCGATGAGGCGGTCAGAGGCTTCTCCATCTCGAG
GGACGGTCCACTGGACATGCGAATGGATGGTGGCCACAGCGGAGGGGTTA
CAGCTGCCGATGTGTTGGCTAATGTTGAAGAGGGCGACCTTGTGAAGATT
TTAAGGATGTATGGTGAAGAGAAAGCAGCCAAGAAGATAGCCAGAGGACT
GGTAGACGCGCGCAACGCCCTCTTTAAAATCGAGACCACCAAGCAGCTGG
CAGATATAATTGAAAACATCATGGATGGCGGGACCAGGAAGGATAAGCTT
CGACGACCGGCACACTCAGCCACCAAGACCTTCCAAGCCATCCGCATATT
TGTGAACAACGAACTAAACGAGATCAACTACGGTATGGTTTTGGCCAACG
AAATCCTCCGTGTGGATGGACGCTTGGTGACCATTACCTTCCACTCGCTG
GAGGACACTATCGTGAAGCGTCACATCAACGGAAACGTCC
BO07575.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:05:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-PA | 1071 | CG14683-RA | 1..874 | 17..890 | 4370 | 100 | Plus |
| CG14683-PB | 1071 | CG14683-RB | 1..874 | 17..890 | 4370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:07:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1507 | CG14683-RA | 405..1278 | 17..890 | 4370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10697874..10698747 | 17..890 | 4370 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 13:07:47 has no hits.
BO07575.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:22:54 Download gff for
BO07575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-PA | 1..874 | 17..890 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:06:49 Download gff for
BO07575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-PB | 1..874 | 17..890 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:06:42 Download gff for
BO07575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 396..1278 | 10..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:30:04 Download gff for
BO07575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 396..1278 | 10..890 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:30:04 Download gff for
BO07575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10697865..10698747 | 10..890 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:06:42 Download gff for
BO07575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6523587..6524469 | 10..890 | 99 | | Plus |
BO07575.complete Sequence
1102 bp (1102 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630847
> BO07575.complete
GAAGTTATCAGTCGACATGAAGCGACTCCTAAACCCTACTAGACTGAGAC
TGGATTGGTTGAGACGAAGCTCTATAGATGTGACGACTGCTCCCCATGTT
CCTGTGCTCTGCGACACCGCCATTGAATACCTGCAGCCCGTTCCAGGAGG
CACCTACTTCGACATGACTTTCGGAGCTGGTGGCCACACGCGGCGTCTTC
TGGAGAAGTGTCCCGAGGCAAAGGTATACGCCCTAGATCGAGATCCATTG
GCCCACCAACTGGCCCGCGATATGAGCGAATCCGAAGAGTTCAAGGGTAG
GCTGATTCCCCTGCTTGGAAAATTCTCCGATTTACCAAAGCTTTTCAAAG
AACATGGCCTGGCCAAGAACTCGGTGGACGGGATGCTTTTTGATTTTGGT
TGCAGTTCCATGCAATTCGATGAGGCGGTCAGAGGCTTCTCCATCTCGAG
GGACGGTCCACTGGACATGCGAATGGATGGTGGCCACAGCGGAGGGGTTA
CAGCTGCCGATGTGTTGGCTAATGTTGAAGAGGGCGACCTTGTGAAGATT
TTAAGGATGTATGGTGAAGAGAAAGCAGCCAAGAAGATAGCCAGAGGACT
GGTAGACGCGCGCAACGCCCTCTTTAAAATCGAGACCACCAAGCAGCTGG
CAGATATAATTGAAAACATCATGGATGGCGGGACCAGGAAGGATAAGCTT
CGACGACCGGCACACTCAGCCACCAAGACCTTCCAAGCCATCCGCATATT
TGTGAACAACGAACTAAACGAGATCAACTACGGTATGGTTTTGGCCAACG
AAATCCTCCGTGTGGATGGACGCTTGGTGACCATTACCTTCCACTCGCTG
GAGGACACTATCGTGAAGCGTCACATCAACGGAAACGTCCTGGCAGGCGC
CGCCAATGCTCTTCCCCTCAAGTACTCCAGCCATTATGCAATAGACGAGC
CAGATATACTAGAATCACTGACCAAGAAGAGCTGGAAACAACTACATCGC
CATGTCATTGTGCCAGACGCCGACGAGGTGGCGAGGAACACACGCAGTCG
ATCCGCCAAGCTGAGAGCAGCCGTCAAAACAAACGCAAGCTTTCTAGACC
AT
BO07575.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:10:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1071 | CG14683-PA | 1..1068 | 17..1084 | 5340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:10:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1507 | CG14683-RA | 405..1472 | 17..1084 | 5340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:10:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10697874..10698941 | 17..1084 | 5340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:10:05 has no hits.
BO07575.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:48 Download gff for
BO07575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RB | 1..1071 | 17..1088 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:37:40 Download gff for
BO07575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RB | 393..1472 | 10..1088 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:37:59 Download gff for
BO07575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 405..1472 | 17..1086 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:48 Download gff for
BO07575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RB | 393..1472 | 10..1088 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:01:23 Download gff for
BO07575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 405..1472 | 17..1086 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:01:23 Download gff for
BO07575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10697874..10698941 | 17..1086 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:37:59 Download gff for
BO07575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6523596..6524663 | 17..1086 | 99 | | Plus |
BO07575.pep Sequence
Translation from 16 to 1102
> BO07575.pep
MKRLLNPTRLRLDWLRRSSIDVTTAPHVPVLCDTAIEYLQPVPGGTYFDM
TFGAGGHTRRLLEKCPEAKVYALDRDPLAHQLARDMSESEEFKGRLIPLL
GKFSDLPKLFKEHGLAKNSVDGMLFDFGCSSMQFDEAVRGFSISRDGPLD
MRMDGGHSGGVTAADVLANVEEGDLVKILRMYGEEKAAKKIARGLVDARN
ALFKIETTKQLADIIENIMDGGTRKDKLRRPAHSATKTFQAIRIFVNNEL
NEINYGMVLANEILRVDGRLVTITFHSLEDTIVKRHINGNVLAGAANALP
LKYSSHYAIDEPDILESLTKKSWKQLHRHVIVPDADEVARNTRSRSAKLR
AAVKTNASFLDH
BO07575.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-PA | 356 | CG14683-PA | 1..356 | 1..356 | 1826 | 100 | Plus |
