Clone Sequence Records
BO07591.3prime Sequence
974 bp (804 high quality bases) assembled on 2006-01-06
> BO07591.3prime
ATGGTCTAGAAAGCTTGCCGTCGCCTGACCCTGGGTGGACTGGCCAGCCA
GGCCAGAGGATATCGATGGTGTCGTACTGGTGGATGCGACTGCCGGCCCT
CCGGATGCGGCAGTGCTCTGCTCCAGACTCCACGGATGCACCATATCGTA
GTACCTGCGATAGTCGTAGTCAAAGAGCTCGAAATCGATGCGATATATCT
TGAGCAATTGGTCCAACGTTGAGCGGTCGAGATCGGCGAAGTATCGCTCG
ACCAGGGCCTCGGATTTAACGCCACTTCGCGCCTGGTTGCCAATTTTGCG
CTGCTTCCGCTGCGGCAGCTTGCCCAGTCCCAGGAGCAGCGATTCCAGGC
CCGCCTGCCGTATGATGAACTCCGAGTCCCTCTGGAACGTCTCCGTCTTG
CCGATGATGGTGAAGTTAACGCTGCAGGGCGTGCAGAAGCTGTAAACTGG
TGCCCAGTGCTCGTCGAATCTCTTGCCCGCCGCATGCTCGGCGATCAGGA
AGCGGACGAACTCCTCGAAGGTGGGTCCACATCGCGGCCAGGGTCCGCCC
AGATTACGCTTCCTGTAGCGATGCACGATCTTGTTGCCCAGCGCCTTGTA
GAAGGTGTTCTTGTTGCCCTCCAGTTTGTTGCGATAGGCGCTCAGGATTC
GCTCGAAGGGATCGCGCACAAAGAGAAAGGACAGCGCACTGGGCAGCAGC
TCCATCAGTTCGCCCAGTTCCGGGCGTGGAAAACGCTTTCTGGCCAGCTC
CAGTGGCTGCGTCTCCGTGCGCTGCAGATACTTCACATCGTAGCCAGCTA
ATATATTAAAGTAATACATCCACGTACTGCTGGCCGCCTTGAAGACGTTG
CACCAGACGAGATTGTTGTGGCCAGGCGAGACGAAGAACTCCAGGGATTC
GGTGGGTACTTTTCTGCAACTTATACCGATCGCAGACGGCGGCCAGATGC
TCGCTCCTCCTCTGCAGCTCCCGC
BO07591.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-PA | 1335 | CG14024-RA | 459..1332 | 892..19 | 4370 | 100 | Minus |
CG14024-PA | 1335 | CG14024-RA | 375..435 | 974..914 | 280 | 98.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:09:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-RB | 2616 | CG14024-RB | 657..1614 | 974..19 | 4725 | 99.7 | Minus |
CG14024-RA | 1798 | CG14024-RA | 657..1614 | 974..19 | 4725 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:09:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5312313..5313093 | 19..799 | 3905 | 100 | Plus |
2L | 23513712 | 2L | 5313386..5313510 | 852..974 | 510 | 97.6 | Plus |
2L | 23513712 | 2L | 5313269..5313325 | 798..854 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 13:09:57 has no hits.
BO07591.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:23:24 Download gff for
BO07591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-PA | 375..1335 | 18..974 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:07:31 Download gff for
BO07591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-PA | 375..1335 | 18..974 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:06:53 Download gff for
BO07591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 651..1608 | 19..974 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:35:08 Download gff for
BO07591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 657..1614 | 19..974 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:35:08 Download gff for
BO07591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5312313..5313091 | 19..797 | 100 | <- | Plus |
2L | 5313269..5313324 | 798..853 | 100 | <- | Plus |
2L | 5313388..5313510 | 854..974 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:06:53 Download gff for
BO07591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5312313..5313091 | 19..797 | 100 | <- | Plus |
arm_2L | 5313269..5313324 | 798..853 | 100 | <- | Plus |
arm_2L | 5313388..5313510 | 854..974 | 97 | | Plus |
BO07591.5prime Sequence
890 bp (768 high quality bases) assembled on 2006-01-06
> BO07591.5prime
GAAGTTATCAGTCGACATGCTCATCCGCCTGCGCTATGGAAGACGCCTGC
AGACCTATCTGAAGATAGGCGCCTGTGTCCTGGTCGGCCTGTGCTACTTC
GCCTTCCTTTTCCGCGAATCCCTCAATGCATACGAGCACCGGGAGCGGGC
TACGGCCGCGGAATTGGAGGCGGAATCGGAGCCATCAAAGCAGCAGCTCA
AGCTAAAGCGGCAGCAGTTGCAGCGCCAGCGGATATTGGCCAAGCAGCAG
GAGCAGGGAAAGGGCATCGCTGGGGGAAATGCCAGTGCAGGCAGCTCATC
CTCCCAAGCAGCAGCTCCTCCGCCGCCGCCGCCGGCTACCACCCTGAATC
CCGTGTATGAGTACTCCGAGGAGCTGCACAGTCGCACGGAGCGGGAGCTG
CAGAGGAGGAGCGAGCATCTGGCCGCCGTCTGCGATCGGTATAAGCTGCA
GGAAAAGTACCCACCGAATCCCTGGGAGTTCTTCGTCTCGCCTGGCCACA
ACAATCTCGTCTGGTGCAACGTCTTCAAGGCGGCCAGCAGTACGTGGATG
TATTACTTTAATATATTAGCTGGCTACGATGTGAAGTATCTGCAGCGCAC
GGAGACGCAGCCACTGGAGCTGGCCAGAAAGCGTTTTCCACGCCCGGAAC
TGGGCGAACTGATGGAGCTGCTGCCCAGTGCGCTGTCCTTTCTCTTTGTG
CGCGATCCCTTCGAGCGAATCCTGAGCGCCTATCGCAACAAACTGGAGGG
CAACAAGAACACCTTCTACAAGGCGCTGGGCAACAAGATCGTGCATCGCT
ACAGGAAGCGTAATCTGGGCGGACCCTGGCCGCGATGTGGACCCACCTTC
GAGGAGTTCGTCCGCTTCCTGATCGCCGAGCATGCGGCGG
BO07591.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-PA | 1335 | CG14024-RA | 1..874 | 17..890 | 4370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:48:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-RB | 2616 | CG14024-RB | 283..1156 | 17..890 | 4370 | 100 | Plus |
CG14024-RA | 1798 | CG14024-RA | 283..1156 | 17..890 | 4370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:48:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5313386..5313884 | 515..17 | 2495 | 100 | Minus |
2L | 23513712 | 2L | 5312771..5313093 | 890..568 | 1615 | 100 | Minus |
2L | 23513712 | 2L | 5313269..5313325 | 569..513 | 285 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 03:48:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-A | 13424 | TART-A 13424bp | 10363..10463 | 224..319 | 115 | 60.4 | Plus |
BO07591.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:23:25 Download gff for
BO07591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-PA | 1..874 | 17..890 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:07:33 Download gff for
BO07591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-PA | 1..874 | 17..890 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:56:23 Download gff for
BO07591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 270..1150 | 8..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:03:34 Download gff for
BO07591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 276..1156 | 8..890 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:03:34 Download gff for
BO07591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5312771..5313091 | 570..890 | 100 | <- | Minus |
2L | 5313269..5313324 | 514..569 | 100 | <- | Minus |
2L | 5313388..5313891 | 8..513 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:56:23 Download gff for
BO07591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5312771..5313091 | 570..890 | 100 | <- | Minus |
arm_2L | 5313269..5313324 | 514..569 | 100 | <- | Minus |
arm_2L | 5313388..5313891 | 8..513 | 99 | | Minus |
BO07591.complete Sequence
1366 bp (1366 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630851
> BO07591.complete
GAAGTTATCAGTCGACATGCTCATCCGCCTGCGCTATGGAAGACGCCTGC
AGACCTATCTGAAGATAGGCGCCTGTGTCCTGGTCGGCCTGTGCTACTTC
GCCTTCCTTTTCCGCGAATCCCTCAATGCATACGAGCACCGGGAGCGGGC
TACGGCCGCGGAATTGGAGGCGGAATCGGAGCCATCAAAGCAGCAGCTCA
AGCTAAAGCGGCAGCAGTTGCAGCGCCAGCGGATATTGGCCAAGCAGCAG
GAGCAGGGAAAGGGCATCGCTGGGGGAAATGCCAGTGCAGGCAGCTCATC
CTCCCAAGCAGCAGCTCCTCCGCCGCCGCCGCCGGCTACCACCCTGAATC
CCGTGTATGAGTACTCCGAGGAGCTGCACAGTCGCACGGAGCGGGAGCTG
CAGAGGAGGAGCGAGCATCTGGCCGCCGTCTGCGATCGGTATAAGCTGCA
GGAAAAGTACCCACCGAATCCCTGGGAGTTCTTCGTCTCGCCTGGCCACA
ACAATCTCGTCTGGTGCAACGTCTTCAAGGCGGCCAGCAGTACGTGGATG
TATTACTTTAATATATTAGCTGGCTACGATGTGAAGTATCTGCAGCGCAC
GGAGACGCAGCCACTGGAGCTGGCCAGAAAGCGTTTTCCACGCCCGGAAC
TGGGCGAACTGATGGAGCTGCTGCCCAGTGCGCTGTCCTTTCTCTTTGTG
CGCGATCCCTTCGAGCGAATCCTGAGCGCCTATCGCAACAAACTGGAGGG
CAACAAGAACACCTTCTACAAGGCGCTGGGCAACAAGATCGTGCATCGCT
ACAGGAAGCGTAATCTGGGCGGACCCTGGCCGCGATGTGGACCCACCTTC
GAGGAGTTCGTCCGCTTCCTGATCGCCGAGCATGCGGCGGGCAAGAGATT
CGACGAGCACTGGGCACCAGTTTACAGCTTCTGCACGCCCTGCAGCGTTA
ACTTCACCATCATCGGCAAGACGGAGACGTTCCAGAGGGACTCGGAGTTC
ATCATACGGCAGGCGGGCCTGGAATCGCTGCTCCTGGGACTGGGCAAGCT
GCCGCAGCGGAAGCAGCGCAAAATTGGCAACCAGGCGCGAAGTGGCGTTA
AATCCGAGGCCCTGGTCGAGCGATACTTCGCCGATCTCGACCGCTCAACG
TTGGACCAATTGCTCAAGATATATCGCATCGATTTCGAGCTCTTTGACTA
CGACTATCGCAGGTACTACGATATGGTGCATCCGTGGAGTCTGGAGCAGA
GCACTGCCGCATCCGGAGGGCCGGCAGTCGCATCCACCAGTACGACACCA
TCGATATCCTCTGGCCTGGCTGGCCAGTCCACCCAGGGTCAGGCGACGGC
AAGCTTTCTAGACCAT
BO07591.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:35:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-RB | 1335 | CG14024-PB | 1..1332 | 17..1348 | 6660 | 100 | Plus |
CG14024-RA | 1335 | CG14024-PA | 1..1332 | 17..1348 | 6660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:35:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-RB | 2616 | CG14024-RB | 283..1614 | 17..1348 | 6660 | 100 | Plus |
CG14024-RA | 1798 | CG14024-RA | 283..1614 | 17..1348 | 6660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:35:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5312313..5313093 | 1348..568 | 3905 | 100 | Minus |
2L | 23513712 | 2L | 5313386..5313884 | 515..17 | 2495 | 100 | Minus |
2L | 23513712 | 2L | 5313269..5313325 | 569..513 | 285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:35:43 has no hits.
BO07591.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:35 Download gff for
BO07591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 1..1335 | 17..1349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:37:24 Download gff for
BO07591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 266..1604 | 8..1348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:42 Download gff for
BO07591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 277..1608 | 17..1350 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:35 Download gff for
BO07591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 266..1604 | 8..1348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:28:32 Download gff for
BO07591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14024-RA | 283..1614 | 17..1350 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:28:32 Download gff for
BO07591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5312311..5313091 | 570..1350 | 99 | <- | Minus |
2L | 5313269..5313324 | 514..569 | 100 | <- | Minus |
2L | 5313388..5313884 | 17..513 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:42 Download gff for
BO07591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5312311..5313091 | 570..1350 | 99 | <- | Minus |
arm_2L | 5313269..5313324 | 514..569 | 100 | <- | Minus |
arm_2L | 5313388..5313884 | 17..513 | 100 | | Minus |
BO07591.pep Sequence
Translation from 16 to 1366
> BO07591.pep
MLIRLRYGRRLQTYLKIGACVLVGLCYFAFLFRESLNAYEHRERATAAEL
EAESEPSKQQLKLKRQQLQRQRILAKQQEQGKGIAGGNASAGSSSSQAAA
PPPPPPATTLNPVYEYSEELHSRTERELQRRSEHLAAVCDRYKLQEKYPP
NPWEFFVSPGHNNLVWCNVFKAASSTWMYYFNILAGYDVKYLQRTETQPL
ELARKRFPRPELGELMELLPSALSFLFVRDPFERILSAYRNKLEGNKNTF
YKALGNKIVHRYRKRNLGGPWPRCGPTFEEFVRFLIAEHAAGKRFDEHWA
PVYSFCTPCSVNFTIIGKTETFQRDSEFIIRQAGLESLLLGLGKLPQRKQ
RKIGNQARSGVKSEALVERYFADLDRSTLDQLLKIYRIDFELFDYDYRRY
YDMVHPWSLEQSTAASGGPAVASTSTTPSISSGLAGQSTQGQATASFLDH
BO07591.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:42:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14024-PB | 444 | CG14024-PB | 1..444 | 1..444 | 2330 | 100 | Plus |
CG14024-PA | 444 | CG14024-PA | 1..444 | 1..444 | 2330 | 100 | Plus |
CG13937-PH | 426 | CG13937-PH | 39..415 | 40..406 | 495 | 33.2 | Plus |
CG13937-PI | 363 | CG13937-PI | 73..352 | 123..406 | 489 | 37.7 | Plus |
CG13937-PE | 363 | CG13937-PE | 73..352 | 123..406 | 489 | 37.7 | Plus |